Xiphophorus maculatus (southern platyfish): 102217136
Help
Entry
102217136 CDS
T02923
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03022
Basal transcription factors
xma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102217136
09124 Replication and repair
03420 Nucleotide excision repair
102217136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102217136
03400 DNA repair and recombination proteins [BR:
xma03400
]
102217136
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102217136
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102217136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Zn_ribbon_GTF2H2
VWA
DZR
Motif
Other DBs
NCBI-GeneID:
102217136
NCBI-ProteinID:
XP_023198932
Ensembl:
ENSXMAG00000019124
UniProt:
A0A3B5R8E9
LinkDB
All DBs
Position
12:712155..727166
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILYESKRKRVTQSHAQVRLGMMRH
IYVVIDCSRSMEDQDLKPNRLTSTLKLMEGFIDEYFDQNPISQVGIITTKNKRAEKLTEL
AGNPKKHIAALKKAVDSSCVGEPSLYNSLSLAIQTLKHMPGHTSREILIILSSLTTCDPA
NIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRDTGGSYHVILDESHFKELLMLHVKPPP
ASFSSESSLIRMGFPQHTVASLSDQDVKPSFSMSHLDSSGGPALTLGGYFCPQCQAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQAFIESPAENYQQNRFCQACQGQLKDKNVFAC
PLCRSVFCGECDLFIHESLHCCPCCIHNRTAT
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagccagagagagccaagcgctgggaaggaggttatgaaaggacatgggag
gtgcttaaggaggatgagtctggctcccttaaagccacagtggaggagattctgtacgag
tccaaaagaaaaagggtgacacaaagccatgcacaagtgaggcttgggatgatgcgccac
atatatgttgttattgactgttcacgcagtatggaggaccaggacttaaaacccaaccgt
ctcacctctaccctgaagctgatggagggattcatcgatgaatactttgaccagaatccc
atcagccaggttggcattatcaccaccaaaaacaaaagggctgagaagcttacagaactt
gcaggaaatccaaagaagcacattgctgctctgaagaaagcagttgacagctcatgtgtc
ggagagccttccctgtacaactctctcagcttagctatacagactctcaagcacatgcct
gggcacaccagcagagaaatcctcatcatcctcagcagcctgaccacatgtgacccagct
aacatctatgagctaatcaagaccctgaagtctcttaaggtgcgagtgtcagtaattggc
ctctcagcggaagtccgagtgtgcacggttctgaccagagacacaggtggatcctaccat
gttatcctagatgagagtcacttcaaagagctgctcatgcttcatgtcaaacctccgcca
gcaagcttctcatcggaaagctctttaatacgaatgggttttcctcagcacactgtagcc
tctctgagtgaccaagatgtcaaaccatcattcagcatgtctcatctggacagcagtggc
ggcccggctctgactctaggaggatacttctgtccgcagtgccaagcaaaatacaccgag
cttcctgtggagtgtaaagtctgtggtttgacgctggtgtctgctccacatctggccaga
tcctttcatcatctgtttcccctccaagcatttattgagagtccagctgagaattatcag
cagaataggttctgtcaggcctgtcaagggcagctgaaagataaaaatgtcttcgcctgt
cctttgtgtcgcagtgtgttctgtggagagtgtgatctcttcatccatgaatcactgcac
tgctgtccctgctgcattcacaatcggactgctacatga
DBGET
integrated database retrieval system
