Xiphophorus maculatus (southern platyfish): 102217146
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Entry
102217146 CDS
T02923
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X2
KO
K10373
tropomyosin 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04260
Cardiac muscle contraction
xma04261
Adrenergic signaling in cardiomyocytes
xma04814
Motor proteins
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102217146
04820 Cytoskeleton in muscle cells
102217146
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
102217146
04261 Adrenergic signaling in cardiomyocytes
102217146
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102217146
04147 Exosome [BR:
xma04147
]
102217146
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
102217146
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of microglial cells
102217146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Crescentin
TMF_DNA_bd
DUF745
DUF3450
ATG16
Lebercilin
ERM_helical
Laminin_I
CENP-F_leu_zip
DUF16
SlyX
DUF1664
Motif
Other DBs
NCBI-GeneID:
102217146
NCBI-ProteinID:
XP_005796215
Ensembl:
ENSXMAG00000017208
LinkDB
All DBs
Position
4:complement(10481808..10492795)
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKASEDRSKQLEDDLVALQKKLKATEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSESKCSELEEELKTVQNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgctatcaagaagaagatgcagatgctcaagcttgacaaggagaatgccttggac
agagctgagcaggccgagtcagacaagaaagcatctgaggacagaagcaaacagcttgag
gatgacctggtagcactgcagaagaagctgaaggccactgaggatgagttggacaaatac
tctgaggccctgaaggatgcacaggagaaactggagctcgctgagaagaaagccacagat
gctgagggtgatgtagcttccctgaacagacgcatccagctggttgaagaggagctggac
cgagctcaggagcgtctggccacagctcttaccaagctggaggaggctgagaaggctgcc
gatgagagcgagagaggcatgaaagtcattgagaaccgagcaatgaaggacgaggagaag
atggagctgcaggagatccagctgaaagaggccaaacacatcgctgaggaggctgaccgc
aaatatgaggaggtggcccgtaagctggtgatcattgagagcgacttggaacgtacagag
gagcgtgctgagctgtccgagagtaaatgctctgagctggaggaggagctgaagaccgtg
cagaacaacctgaagtctctggaggcccaggcagagaagtactcacagaaggaggacaag
tacgaggaggagatcaaggttctcacagacaagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagttgccaagctcgagaaaaccatcgacgacctggaggatgagctg
tatgcccagaaactgaagtacaaggccatcagcgaggagctggaccacgccctcaacgac
atgacatccatgtaa
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