Xiphophorus maculatus (southern platyfish): 102217211
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Entry
102217211 CDS
T02923
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102217211
Spliceosome [BR:
xma03041
]
Common components
Common spliceosomal components
General mRNP proteins
102217211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_5
RSRP
Motif
Other DBs
NCBI-GeneID:
102217211
NCBI-ProteinID:
XP_023180842
Ensembl:
ENSXMAG00000012463
LinkDB
All DBs
Position
20:5782445..5790664
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AA seq
504 aa
AA seq
DB search
MMADDLDIEAMLEAPFRKEDGKNQSPEGQEERSKRKKRSRSRDRKRSRSRDKKRSRSRER
KGSRSRDRRRSRSRERRRSRSRSRERGGRYKDHHKHRRRSRSKSPIRKEKSPARLPLDNL
TPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEAS
SVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANSLQKGTFGPMRLYVGSLHFNITE
EMLRGIFEPFGRIENIQLMMDSETGRSKGFGFITFADAECAKKALEQLNGFELAGRPMKV
GHVTERTDAAAASSFLDNDELDRSGVDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSG
AIAIGALAAVSAAMNPPLTMNMSTPALNLPSQPLATHCFQLSNMFNPNSENVPGWELDIQ
HDVIEECNKHGGVVHIYVDKNSAEGNVYVKCPSIPSAMAAVNALHGRYFGGKMITAAYVP
LPTYHNLFPESATATQLLVPPARR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggacgacctggacatcgaggcgatgctggaggctccattcaggaaggaggat
gggaagaaccagagccctgaaggacaggaggagcgcagcaagaggaagaagcgcagccgc
agcagagacaggaaacgcagccgcagtcgggataagaagaggagccgcagccgcgagcgc
aaaggcagccgcagccgcgaccgacgcaggagccgcagccgggagcgcagacgcagccgc
agccgcagccgggagcgggggggccgttacaaagaccaccacaagcaccgcagacggtcg
aggagcaagagtccaatcaggaaggagaaaagcccagccaggctgccgctggacaacctg
accccggaggagcgggacgcccgcaccgtgttctgcatgcagctggcggcccggatacga
ccccgcgacctggaggagttcttctctgctgtggggaaggttcgggatgtgaggatgatc
tctgacaggaactcacggaggtcaaagggcatcgcctacattgagtttgtggaggccagc
tcggttcctctggccatcggcctgacgggtcagaggctgctgggggttcccatcatcgtc
caggcctcacaggcagagaagaaccgagctgctgccgctgctgcagccaatagccttcag
aagggaacatttggcccgatgcggctctacgtcggctcgctgcacttcaacatcacagag
gagatgctgagagggatctttgagccgtttggacggattgaaaacatccagctgatgatg
gacagcgagacgggccgatctaaaggcttcggcttcatcacgtttgcagacgcagagtgc
gctaagaaggcactggagcagctgaacggcttcgagctggcgggccggcccatgaaggtg
ggtcatgtgaccgagcggaccgacgccgccgccgcttcctccttcctggacaacgatgag
ctggaccggtccggggtggacctgggaaccacggggcggctgcagctgatggcccggctg
gctgaaggtaccggcctgcagatccctcctgccgctcagcaggcgctgcagatgagtggc
gccatcgccatcggcgcgctggcggccgtgtcagctgccatgaatccacctctgaccatg
aacatgagcactccggcgcttaacctgccgtctcagccactcgccactcactgtttccag
ctgtccaacatgttcaaccccaacagtgagaacgtgccaggctgggagctggacatccag
cacgacgtcatcgaggagtgcaacaaacacggaggagtcgtccacatctacgtcgacaag
aactcagccgaggggaacgtttatgtgaagtgcccgtccatcccgtctgccatggccgcc
gttaacgctctgcacggcaggtactttggaggtaaaatgatcacagcggcgtacgtcccc
ctgcctacctaccacaacctgttcccagagtctgccactgccacgcagctgctggttcca
ccggccaggcggtga
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