Xiphophorus maculatus (southern platyfish): 102217228
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Entry
102217228 CDS
T02923
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102217228 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102217228 (hspd1)
03110 Chaperones and folding catalysts [BR:
xma03110
]
102217228 (hspd1)
03029 Mitochondrial biogenesis [BR:
xma03029
]
102217228 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102217228 (hspd1)
Enzymes [BR:
xma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
102217228 (hspd1)
Messenger RNA biogenesis [BR:
xma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
102217228 (hspd1)
Chaperones and folding catalysts [BR:
xma03110
]
Heat shock proteins
HSP60 / Chaperonin
102217228 (hspd1)
Mitochondrial biogenesis [BR:
xma03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
102217228 (hspd1)
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102217228 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
102217228 (hspd1)
Exosomal proteins of breast cancer cells
102217228 (hspd1)
Exosomal proteins of colorectal cancer cells
102217228 (hspd1)
Exosomal proteins of bladder cancer cells
102217228 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
102217228
NCBI-ProteinID:
XP_005816401
Ensembl:
ENSXMAG00000005891
UniProt:
M3ZUM7
LinkDB
All DBs
Position
7:3015976..3024377
Genome browser
AA seq
575 aa
AA seq
DB search
MFRLPTVMKQVRPVCRALAPHLTRAYAKEVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDNISKGANPVEIRRGVMLAVETVINELKKLSKPVTTPEEIAQVATISANGDV
EIGNIISNAMKRVGRKGVITVKDGKTLQDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDEALGLALEDIQAHDFGRVGEVQITKDDTLVLKG
GGSPADIEKRAAEIAEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDALKTANNDQKIGVDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGASDMGYDAMQGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKEMPAGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtctacctaccgtcatgaaacaggtgaggcctgtgtgccgggccctggctcct
cacctcacacgagcatacgccaaggaggtgaagtttggggcggacgcgcgcgccctcatg
ctgcagggggtggacctgctggctgacgctgtggccgtcaccatggggccaaagggtcgc
actgtcatcatcgagcagagttggggcagtccaaaggtcaccaaggatggcgtgacggtg
gccaaaagcatcgacctgaaggacaagtacaagaacattggggccaagctggtgcaagat
gtggccaacaacaccaacgaggaggccggcgacggtaccaccacggccacggtgctggcg
cgggccatcgccaaggagggcttcgacaacatcagcaagggcgccaaccccgtggagatc
cggcgtggagtcatgttggccgtggagacggtcatcaacgagctgaagaagctctcgaag
cctgttacaaccccagaggagatcgcacaggtcgctaccatctcagccaatggagacgtg
gaaatcggtaacatcatttccaatgccatgaagagagttggccgcaagggagtcatcaca
gtaaaggatgggaagactttgcaggacgagctggagatcattgagggaatgaagtttgac
cgtggttacatctctccttacttcatcaacactgctaaaggccagaagtgtgagttccag
gacgcctacctgctgctcagtgagaagaagatctccagcgtccagagcatcgtaccggct
ctggaaatcgccaaccagcaccgcaaacctctggtgattgtagctgaggatgtggacgga
gaagctctgagcaccctggttctcaacaggctgaaggtcggtcttcaggtggtcgctgtc
aaagctccaggtttcggagacaacaggaagaaccagctgaaggacatggccatcgccacc
ggcgggacggtgtttggtgatgaagctctgggtctggctctggaggacatccaggctcac
gactttggcagagtgggtgaggtgcagatcaccaaagacgacactctggttctgaagggc
ggaggcagccccgccgacatcgagaagcgagcggcagagatcgccgagcagctggagaac
accaccagcgactacgagaaggagaagctcaatgagaggctggccaagctgtctgacggg
gtggccgttctcaaggtggggggaaccagcgacgtcgaagtgaacgagaagaaggaccgc
gtgacggatgctctgaacgccacccgggccgccgtggaggagggcattgttctcggcgga
ggctgcgctctgctgcgatgcatcccggcgttggacgccctgaaaaccgccaacaatgac
cagaagatcggcgtggacatcatcaggcgggcgctccgtattcctgccatgaccatcgct
aagaacgctggtgtggagggctccctggtggtggagaagatcctgcagggagcgtcagac
atgggctatgatgccatgcagggagagtacgttaacatggtggagaagggcatcatcgac
cccacaaaggtggtaaggacggcgctgatggacgccgccggagtcgcgtctctactttcc
accgccgaggccgtcgttacggagatccccaaggaggagaaggagatgccagcaggcatg
ggcggcatggggggaatgggaggaatgggaggcggcatggggttctga
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