Xiphophorus maculatus (southern platyfish): 102217430
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Entry
102217430 CDS
T02923
Symbol
arvcf
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1
KO
K28154
splicing regulator ARVCF
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102217430 (arvcf)
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102217430 (arvcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Cnd1
Arm_2
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
102217430
NCBI-ProteinID:
XP_023198886
Ensembl:
ENSXMAG00000002404
UniProt:
M3ZJK8
LinkDB
All DBs
Position
12:28409055..28670192
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AA seq
985 aa
AA seq
DB search
MEDYDVRSAASILASVKEQEERFEQLTRALEEERRNVTLQLERANLPPNPAISQPLAWQQ
VVMQEQSPSNATSLAMMQEPQEPQEVVEETVTIEEDPGTPTSHVSVVTSDDGTTRRTETK
DMSTNVKVTKMVKTVTTRTVRQVPLGPDGLPVPEGTSPLSNYTDSIDRRYMKNGGERFIT
PQATSTLTRAYNNSYNDSYVETPESQYIRHYGLHDGYVDLTDNYGSLSRGVNFRPPRYPY
MPNSYRPENSYTLPIRKDDYGHVAQPQVPMGSSTVDLNRSQPERFQPEPYGLEDDRRSLG
PEEEEPYELEPDYSTANRRTLPGTNRGRTHREPLRDVHRVRGYPDDPIEAELIDERHPYI
HGMYSAPLAQPERGSMASLDRMAGRRSPSIDSIRKDPRWRDPDLPEVIAMLGHPIDPVKS
NAAAYLQHLCYENDKIKKDVRQLKGIPILVSLLDHPKSEVHRKACGALRNISYGKDNENK
VAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTMTNEVIIP
HSGWEHEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECEGLVDALLHALQS
AVGKKDMDNKSVENCVCIMRNLSYHVHKEVPGAERFQDPSALQAPGSAGPQRKKKDDAGC
FGGKKAKEEWFNQGRKNGENDKNYDTLDLPKRTEPSKGFELLYQPEVVRLYLSLLTESQN
YNTLEAAAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELLRSDSDKVVRAVAIALRNL
SIDRRNKDLIGNYAMRDLVSNLPSGQQRPAKNLEEDTVVAILNTIHEIVTDSSENARSLI
QAQAIEKLVAINRTSQSARETKAASHVLQTVWSYKELRNALTKDGWNKSHFQPTVTATPK
ATKNGKPGYDDTTLPLMEKNQDGYSTIDQRDKDCKYKTDDGSADLTEREPLKNDTNRKHY
IRSNRPAVSLVDACDVKPQPVDSWV
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggaggactatgacgttcgctctgccgccagcatcctggcctcggtgaaggagcaggag
gagcgttttgagcagctaacccgagccctagaggaggagcgccgcaacgtcaccctgcag
ctcgagcgggccaatctgccacccaaccccgccatcagtcagccactggcatggcagcaa
gtggtgatgcaggagcagagccccagtaacgccacgtccctggctatgatgcaggagccg
caggagccgcaggaggtggtggaggagacggttaccatagaggaggaccccggcaccccc
acgtctcacgtctcggtggtcacctccgacgacggaaccacgcggcgcacagagaccaag
gacatgtcaaccaatgtgaaggtgactaagatggtgaagacggtgaccaccagaacagtt
cggcaggtccccctgggcccagacggcctacctgtgcctgaaggcacatcccctctgagc
aactacaccgattccattgaccgacgatacatgaagaacggaggcgaacgcttcatcaca
ccccaagcaacctctaccctgacccgcgcctacaacaactcctacaacgactcgtacgtg
gagacaccggagagccagtacatccgtcactacggcctccacgacggctatgtggatttg
acggacaactatggtagcctgtcgcgtggcgtcaacttccggccacctcgctacccctac
atgcctaacagctaccgtccagagaacagctacactctgccaattagaaaggacgactat
ggccatgtggcgcagccccaggtgcccatggggagcagcacagtggatctgaaccgctcg
cagcctgagcgattccaacccgagccttatggtttggaggacgatcgtcgcagcttgggg
cccgaagaagaggagccgtacgagctggaacccgactactccactgccaaccgccgaacc
ctgccggggacgaaccggggccgcactcatagggaacctctccgtgatgtgcacagggtc
agagggtacccagatgaccccattgaggcagagctgattgatgagcgccacccttacatc
catggtatgtattcagcaccacttgctcagcccgagagaggaagcatggccagtctggac
cgaatggccggccggcgttcaccttccatcgacagcattcgcaaggacccccgctggcgg
gaccccgatctcccagaggtcatcgccatgctgggtcaccccatcgacccggtgaagtcc
aacgccgccgcctacctgcaacacctctgctacgagaatgacaaaattaagaaggacgtc
cgccagctgaaagggattcccattctggtcagccttttggatcaccccaaatccgaagtg
caccggaaagcctgcggcgcacttcggaacatctcctacggcaaggacaatgaaaacaag
gtggccatcaagaactgtgatggtattccggccctcatccgtctgctgaggaagaccaac
gacatggaggttcgagaactcatcaccggtaccctttggaatctgtcgtcctacgagccc
ctgaagatggtgatcatcaaccacgggcttcagaccatgaccaacgaggtcataatcccc
cactcggggtgggagcacgaacccaacgaggactccaagccccgggacgcggagtggacc
accgtcttcaagaacacgtccggatgcctcagaaacgtgagctcagacggggcagaggct
cggcgcagactgagggaatgcgaaggcctggtggacgctttgctgcacgcgctgcagtcc
gccgtagggaagaaagacatggacaacaagtccgtggagaactgcgtttgcatcatgagg
aacctctcctatcacgtgcacaaagaggtgcctggcgccgagagattccaggacccatcg
gccctacaggcccccggatccgcggggccacaaagaaaaaagaaggatgatgctggctgc
ttcgggggaaagaaggccaaagaggaatggtttaatcaaggcagaaagaatggtgaaaat
gacaaaaactacgacactttggatctacctaaacgtacagagccttccaaaggcttcgag
ctgctgtaccagcccgaagtggtgaggctctacctttctctgctgacggagagccagaac
tacaataccctggaggcggctgcaggggctctgcagaacctcagcgctggacagtggact
tggtccaattacatccgagccacagtgcggaaggagaaaggtctccccatcctggtggag
ctgctgcgctccgactctgacaaggtggtccgagccgtggccatcgctctgcgcaacctt
tccatcgaccggcgcaacaaggatctgataggaaattacgctatgcgggacctcgtcagc
aacctgcccagcggccagcagcgaccagccaagaacctggaggaggacaccgtggtcgcc
atcctcaacacgattcacgagattgtgacagacagctcggaaaatgctcgctccctcatc
caggcccaggccatcgagaagctggtcgccatcaacaggaccagccaatcggctcgcgaa
acaaaggcagcgtcgcacgtcctgcagacggtgtggagctacaaggagctgaggaacgct
ttgactaaggacggttggaacaagagccacttccagcccactgtgacggccacacctaaa
gctaccaagaacggcaaaccaggttatgatgacaccactctgccactgatggagaagaac
caagacggctactccaccattgaccagagggacaaagactgcaaatacaaaacagacgac
gggtcggcggacctgacagaacgggaaccattaaagaatgacacaaataggaaacactat
atcaggagtaacaggcctgcagtcagtctggtggacgcttgtgatgttaaacctcagcct
gttgactcctgggtgtaa
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