Xiphophorus maculatus (southern platyfish): 102217470
Help
Entry
102217470 CDS
T02923
Symbol
tsen2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2 isoform X1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xma03016
]
102217470 (tsen2)
Enzymes [BR:
xma01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
102217470 (tsen2)
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
102217470 (tsen2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
102217470
NCBI-ProteinID:
XP_023180844
Ensembl:
ENSXMAG00000012479
LinkDB
All DBs
Position
20:5778240..5782235
Genome browser
AA seq
391 aa
AA seq
DB search
MQAEFRPPRRRNRVYEDYKAPLPLIRNRQDRKHYRGELVHQQVLVCHPDHIQSIYSQGYF
GKGVLSRARPERSISDQWEQHKGVLLPVISHSRYEELLRWAEAELSSQRLDEEAANQTLL
ALTETVEEEEEANGAVEEEPRGGACVQMKRLGAESEPEERNCRSDSQNLDLDSEPDSDSD
SDPGSGLRVPGPGYVLVDLEAQDGGRAREVRRSPLALTEYLQLSLEEAFFLVYSLGVLSV
YQQQEPLSVVQLWRKFRLLRPDFASSYAAYHHFRSRGWVPKGGGGAKYGVDLMLYRKGPP
FYHASYSVVVERTGESLGGAALRPFSWRSLAALSRITASVSKELMLCYIIYPTDLSEDDL
DSPVCLSRLKVQEVIVSRWVSSRERAEQDDI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggagttccggcctcctcggaggaggaaccgggtttatgaggactacaaggct
ccgctgccgctgatccggaaccggcaggacaggaagcattaccggggggagctggtccac
cagcaggttctggtctgccatccggaccacatccagagcatctacagccagggatacttt
gggaaaggggttctgtccagagcccgaccggaacgcagcatttccgaccaatgggagcaa
cacaaaggtgtgcttctacctgtcatctctcattccaggtatgaagagctgctcaggtgg
gcagaggcggagctttcttctcagcgattggatgaagaggcggccaatcagacgctgctg
gctctgactgagactgtggaggaggaagaagaggcaaatggagcagtagaagaagagcca
aggggcggagcctgtgtccaaatgaagaggctaggggcggagtcagagccagaggagaga
aactgcaggtccgactcacagaacctggacctggactcagaaccggactctgactccgac
tctgatcccggttctggtctccgtgttccaggtcctggttacgtcctggtggacctagag
gctcaggatggaggcagagccagggaggtgaggcggagtcctctggctcttacagagtac
ctgcagctgagcctggaggaggccttcttcctagtctacagccttggcgttctgtctgtc
taccagcagcaggagcccctgtcagtcgtgcagctgtggaggaagtttcggttgctgcgt
cccgactttgccagctcctacgctgcgtaccatcacttccgcagcaggggatgggtccct
aagggaggaggcggggccaaatacggcgttgatctcatgctctacaggaagggaccacct
ttctaccatgccagctactcggtggtggtggagaggaccggcgaatcgttggggggggcg
gcgctgcgcccgttttcctggcgctctctggcagctctcagcaggatcacagcctctgtc
tccaaggagctgatgctgtgttacatcatctacccgactgacctatcagaggatgacctg
gattcacctgtgtgcctgagcagattaaaggttcaggaagtgatcgtcagcaggtgggtt
tcctccagagagcgagcagagcaggacgacatctga
DBGET
integrated database retrieval system
