Xiphophorus maculatus (southern platyfish): 102217511
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Entry
102217511 CDS
T02923
Symbol
soga1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102217511 (soga1)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
102217511 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
102217511
NCBI-ProteinID:
XP_023187378
LinkDB
All DBs
Position
1:complement(8482092..8573186)
Genome browser
AA seq
1890 aa
AA seq
DB search
MTKTKEVDVHNSPTHLSFASPKERRLHLRQKMESGGGTESSDGGQGQHSAPGQPQQHPGA
ETAAQPARTGEKKKINRAPSPARPKDVPGWSLTKIRGGIGSTTLSVKPGAIHLGSRISRR
SPVGSLAGKDGKAERGGGKTVGKSSLLSKTSASKAAKSNSGRRKVSDASTGSDDLSKDSG
CAAGKLSPTDSSSELSDCASEENKLSADAGSSDTESRSSRGAEGEKPLGSRAGQRAAARN
TCSTAEKDEKDRLFLSVETGEDSISPGEERSATSFDSRVPASTSLAFSDLTEEFTDGLHE
EYLREIEELRSENDYLKDEMEELRSEMLEMRDMYMEDDVYQLQELRQQLEQANKTCRILQ
YRLRKAERRSLRVAQTGQVDGELIRTLEQDVKVAKDVSIRIHSQLDSLEKKRSRLEQENE
ELRVRLQDLEVAKQVLQQELDKNSQKKRGARSSNKPDKKPAPQEDNSDLKCQLHFAKEES
ALMCKKLTKLVKDSEAMKEELAKYRSLYGDVNSSLTVEEVADSPHTREAEVRVHLKLVEE
EANLLSRRIVELEVENRGLRAEMDEMKGSQDGHQELSSVGPGTGLGGAVVLGGGASSENV
MELQRHLQFVEEEAELLRRSLIEMEEQNKLLMNEINRYKSELPPATSALSAESLMSLTDG
LLNDSHSVQDGAVLISTDTPAPEEELRLARLQVGELSGKVKKLQYENRVLLSNLQRCDLA
SYHAPSSSSSSSSLRLALETDAEAGDSAECLPLSPPHRKEPVGGENDAMEMEEQKKKIED
NAEATTPLSGCLGQKDRDALLAMRDQARLVSTAIHLLTSPESNCLSSSSSPSLYHKVCSN
EAAEPCDLEKPQSHCQISELSDLADRPLVGALTSRLQALHTQLQAFVEQVDGLGKAPYGA
RDAQVEGASPPASPCASIPCSGDGQDQENKVEHKQPDYRDQSDPDKKDDTYQSSQSISND
MQNRAAGQLEQEKETDRSTSVQLSDLQAQLSTEKESTRGTLEELERERQNHKGISLRLSQ
LQEEHQKALLRRDFQLQSLGLQARLQQKLWGQERTLLVQESQHLKQALLLLSLKLRCFLK
QWRLGCQKDADGKDVLEINSLKDLYLLLEEESQADKSASADEQPLSPTIKSSAVSSTLAD
LKVALQDLSAELRQERQGSQELTQQFAKAKASWEVERTELKSLITQFETKLGKTTAALSS
AETLDPLDLKVALKKEREEHQHLLAESYAAVMDLTKQLQIGERNWSREKLELLERFSQER
TQWEQRLRDAATQQEKVRRSKPPGDEPSVDTGVVNGSPSPRIKSTLEDSEGNRSSCVKDK
AHFGSMPLFTGSEFGDITVKNWTSITNETPEVADACKTWDGPSGSSSSSAASQMDLDFVQ
RSCTAPDRTGIRIYYSPPAVRRMEHRRRYQEPLDPDQYSVGGSSLKQNDTDGGVASLNAL
DAQQQQPASSFTSSYEQWLSSLSKQHRELLESRGSNISTSMPSVFSSSGEANRVVDGMMS
GSPYHDLEIGDISANLSDDMKEMTNCVRQAIRSSSLERKSSKEPGSQPGGVSNKTTQTVA
QGVSIGLQTETSRATGLHSKSWSPRPTPTTTSSLASARTRQISTSLDKVHSRIERPCCSP
KYGSPKLQRRVSSGSTSRLDGASSSRDRSMWSLHQRAIGGSGGSAWARSTTTRDSPVLNG
LTDGLSSLFSVVEHSGSTESLWRSEIGSSQTASPARQPHAAGKPSGAAVCGSDSNSQRYG
GLVQEFFRNVCSSRGPGGAPLSMERVQRDPLAVLGGVGVLGGLNSVDDPTLGGAAALAGL
SGGNDSVTRIVNKRFMRQTAGEEMISIMGGGKEATSNSVAAGPGTEDAPCDCATQSSCFV
RSSRAAARHCKHRPQDSPAGAEEKGDACNE
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaaaggaggttgatgtccataactctccgactcacctctccttcgcctcg
ccaaaggaacggagacttcatctccggcagaagatggaaagcggaggcgggacggagagc
tcggacggcggccaggggcagcactcggcgcccggtcagccgcagcagcaccccggggct
gaaacggcggcacagcccgcccgcacgggtgagaagaagaagataaaccgggcaccgtct
ccggcgagaccgaaggacgtgcccggttggtcgctcacaaagatccgcggagggatcggg
agcacaaccctgagcgtcaagcccggagctatccatctgggcagccgcatttccaggcgc
agccctgtgggcagcctcgctggaaaggacggtaaagccgagaggggcggcgggaaaacg
gtgggaaagtcttcgctgctgtccaagacttcggcgtccaaagcggcaaaaagcaacagc
ggccggaggaaggtgtcggacgccagcacagggtccgacgacctatccaaagactctggg
tgcgccgcggggaagctctccccgacagacagcagctccgagctttcggactgcgcctcc
gaggaaaacaaactctcggcggatgctgggagcagcgacaccgagtcgaggagcagccgc
ggcgcagaaggagagaagccgctcgggagcagagctggtcagcgagcagccgccaggaac
acctgctccaccgcggagaaagatgaaaaggatcggctctttctgagcgtggagaccggg
gaggatagcatttccccgggcgaggagcgctcggccacctcgtttgacagcagggtgcct
gccagcacatccctggcgttctcagacctcacggaggaatttaccgatggcttgcatgag
gagtacctcagggaaatagaagagctgagatctgaaaatgattacctcaaagatgagatg
gaggagctgaggtctgagatgctggaaatgagggacatgtacatggaggatgatgtttac
cagctgcaggaactgcgccaacaactggagcaggcaaacaaaacctgccgcatcctgcag
taccgactgagaaaggcagagcggcgctctctgcgcgtagcccaaacgggccaggtggat
ggagaattgataaggacgttggagcaagacgtaaaagtggcgaaggatgtctccatccga
atccacagccagctggacagtttggagaagaagaggagtcggctggagcaggagaacgaa
gagctccgagtccggctgcaggacctggaggtcgccaaacaagtcctgcagcaggagctg
gacaagaactcccagaagaaaagaggagcacggtccagcaacaaaccggacaagaagcct
gctccacaggaagacaattcagacctgaagtgtcagctccactttgccaaagaggagtcg
gccctgatgtgcaagaagctgaccaagttggtgaaggacagcgaggccatgaaggaagag
ctggccaagtacaggtctctatacggagacgtcaacagctcgctcaccgtggaggaggtt
gccgactctccacacactcgcgaagctgaggtcagagttcacctaaagctggtagaggag
gaggccaacctgctgagtcgacgcatcgtggagctggaggtggagaacaggggactccga
gccgagatggacgaaatgaagggctcacaagacggccaccaagaactttctagtgttggt
ccagggaccgggcttgggggagccgtggtgcttggcggaggggcctcgtccgaaaacgtc
atggagctccagaggcacctgcagtttgtggaggaggaggccgagctgctgaggaggtct
ctgatcgagatggaggagcaaaacaaactgctgatgaatgagatcaaccgctacaaatcc
gaactcccgcctgcgacgtccgcgctgtccgccgagtcgctgatgtctctgacagacggg
ctgctgaacgacagccactcggtccaggacggggccgtgctcatcagcaccgacacgccg
gcccctgaggaggaactgaggctggcgaggctccaggtgggagagctgagcgggaaagtg
aagaaactgcagtacgagaaccgtgtgctgctgtccaacctgcagcgctgcgatctcgcc
tcgtatcacgctccttcttcctcgtcctcctcctcctcgctgaggctggctttggagaca
gatgcagaagcaggagactcagctgagtgcctccctctcagcccgcctcatcgcaaagag
ccagtaggtggtgagaatgacgccatggagatggaggaacagaaaaagaagatcgaggac
aacgctgaggcaacgactccgctctctgggtgcctggggcagaaggaccgtgatgccttg
ttggccatgagggaccaggctcgtttggtttccactgccatacatctgctgacctccccc
gagtccaactgcctgtcctcctcctcttctccctcgctgtatcacaaggtctgcagcaat
gaggcagcagagccgtgtgacctggagaaacctcagtctcactgccagatctcggagctt
tctgacttggcggaccgtcctctggttggtgctctgaccagcaggcttcaggccctgcac
acccagctgcaggcctttgtagagcaggtggatggcctgggtaaagctccatatggggcg
agagacgctcaggtggaaggggcgtcccctccagcgtcaccctgcgcttccatcccttgc
tccggagacggccaggatcaagaaaacaaagtcgagcacaagcagcctgattatagggac
caatcagatccagacaagaaagatgacacttaccagagcagccaatccatcagcaacgac
atgcaaaatcgggcagctggacaattggagcaggagaaggagacggatcgttccacgtct
gttcagctcagtgacctgcaggcgcagctgtccacagaaaaggagtcaaccagaggaact
ctggaggagctggagagagaaaggcagaaccacaaaggaatcagcctgagactctcacag
ctccaggaggagcaccagaaggcccttctccgacgggacttccagcttcagagcctgggc
ctgcaggctcgacttcagcagaagctgtggggtcaggagaggactctgctcgttcaagag
tcccagcacctgaaacaggctctgttgctgctgagtctgaaactacgctgctttctcaaa
cagtggaggctgggctgccagaaggatgcagatgggaaagatgtgttggagataaacagc
ctgaaggatttgtacctgctgctggaggaggagagccaggcagataagagtgcctctgca
gatgaacagcctctcagcccgactataaagtcaagtgctgtgagtagcactttggcagac
ctaaaggttgctctgcaggacctgagtgcagagttgagacaagagagacaaggctcccag
gaacttactcagcagttcgcaaaggccaaagcatcatgggaggtggagagaaccgaacta
aagagcctcatcacgcagtttgagaccaaactcgggaaaaccacagcagcactgtcctcc
gctgaaacactggaccctcttgacctgaaggtggctcttaaaaaggagcgtgaggagcac
cagcacctcctcgccgagtcgtacgcagccgtgatggacttaaccaaacagcttcagatc
ggagagaggaactggagcagggagaagctggagctgctggagaggttcagccaggagaga
acgcagtgggaacagaggctgagagacgctgccacacaacaggagaaggtgcgaaggtcg
aagcctccgggagacgaacccagcgtggacacgggtgttgtaaatggatcgccatcgccg
aggatcaaatctacactggaggactcagagggtaacagatcttcctgtgtgaaggacaaa
gcacattttggttcaatgccgctttttactggatccgagtttggagatataaccgtgaag
aactggaccagcataaccaacgagaccccagaggtggctgatgcctgtaaaacctgggat
ggtccaagcggttcttctagcagctccgcggcctctcagatggacttggactttgtgcag
aggagctgcactgctccggaccggaccggcatccgtatctactacagccctcctgctgtg
aggcgtatggagcaccggagaagataccaagagcctctagatcccgatcaatacagcgtt
gggggctcctctctgaaacagaatgacacggatggtggcgtggcttcactaaacgcgctc
gatgctcagcaacaacaacccgcctcatcatttacctcttcctatgagcagtggctcagc
tcgctgtccaagcagcaccgggagctgctggagagcagaggcagcaacatttccacgtcg
atgccgagcgttttcagcagcagtggggaggctaacagggtggtggacgggatgatgtcc
ggttctccctaccatgacctggagatcggagacatctctgccaacttaagtgatgacatg
aaggaaatgactaactgtgtccggcaagctattcgctcttcttctctggagaggaaatcc
agcaaggagcctgggagtcagcccggtggagtatccaacaagaccacccagactgtagct
cagggtgtcagcatcgggctgcagacagagaccagcagggcaacggggttgcactccaaa
tcctggtcacctcggccaacgccaacaaccacttcctcactggcatccgcccgaactcgg
cagatttctacatctctggataaagtgcacagccgcatcgagaggccatgctgttcgccc
aagtatggatcgcctaagctacagcggagagtgtcttctggttccacttccagactggac
ggcgcttcctccagcagagaccgcagcatgtggagcctacatcagcgggccatcggtggg
agtggcggctctgcttgggctcgctccactacgacgagggacagccccgtcctgaacggc
ctcaccgacggcctctccagccttttcagcgtagtggagcactccggaagcacagagtcg
ctttggaggagtgaaatagggtcaagccagacggccagcccggctcggcagcctcacgct
gccggaaaaccctccggtgctgctgtttgcggctccgactccaactctcagcggtatgga
gggctggtgcaggagttcttcaggaatgtgtgcagcagccgcggcccaggtggagccccc
ctgtccatggagagagtgcagagagaccccctcgctgtcctcggaggcgtgggtgtcttg
ggtggcttgaacagcgtggacgaccccacactcggaggggctgctgcgctggctggactg
agtggaggcaacgacagcgtgaccaggattgttaataagcggtttatgaggcagacagct
ggggaggagatgatcagcatcatgggaggagggaaggaagcaacgagcaacagcgtggct
gcaggaccgggaaccgaggatgcaccttgcgattgtgctacccagtcctcctgctttgtc
cgatcgtctagagcagctgctcgccactgcaagcaccgcccacaggactctccagctgga
gccgaggagaaaggagacgcctgtaacgagtga
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