Xiphophorus maculatus (southern platyfish): 102217615
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Entry
102217615 CDS
T02923
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102217615 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102217615 (mbd4)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102217615 (mbd4)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
102217615 (mbd4)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102217615 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
102217615
NCBI-ProteinID:
XP_005805745
UniProt:
A0A3B5QSM0
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All DBs
Position
1:20589144..20593191
Genome browser
AA seq
451 aa
AA seq
DB search
MDVQSNKEALPHGWIREVRQRKAGKTAGKLDVYIISPSGQRFRSKSSLHDYLLKNGGENL
DINLFDFTSSKTKFTSSETDHSKETQEKWTKKQANGQQEQIGGKVKSARHKSKNSSSSTR
CKVSKSKVKPAVEDIRSNILQEDIAEEAEQISSQATSSSDLADDDDTHKSPRRVGLLREK
ILRLAPSSDQRNTFLPAHRNQLANTPPLVPTLSVEAATESEDESENVANTDVAQAHSKGD
KSNSEVVDNADSHREEEVLPDNSGGSCTPVRDSHNRSKNLESRRKTSPYFSGKHLKDGLS
PPRRKSLRKWTPPRSPFNLIQETLFHDPWKLLVATIFLNKTSGKMAIPVLWVFFERYPSA
EVTREADWKPMSELMKPLGLYELRAKTIIRFSDEFLNKQWRYPIELHGIGKYGNDSYRIF
CVDEWRQVTPKDHKLNKYHAWLWENHKTLGI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccagagtaacaaggaagcactgccacatggatggattagagaagtgaggcag
agaaaagctggcaagactgcaggaaaactggacgtgtacataataagtcccagtggacag
aggttccggtctaagtcgtccttgcatgattacctgttgaaaaatggaggagagaacctg
gacataaacctgtttgatttcacctcatccaaaactaaattcaccagctctgaaacagat
cattccaaagaaacacaagagaaatggacgaaaaagcaagcaaatggacagcaggaacaa
ataggtggaaaagtgaagtctgccagacataaatctaaaaacagctcttcctctaccaga
tgtaaagtcagcaagagcaaggtaaagcctgctgttgaggatattagaagtaatattttg
caagaggacatagctgaggaggctgagcagattagctcacaagctacatcttcatcagac
ttggcggatgatgatgatacacacaagagcccccggagggtgggactgctgagggagaaa
attctgagactggctccttccagtgatcaacgaaacaccttccttccagctcacaggaat
caactggcaaacacgccgcctttggtcccgactctgagtgttgaagctgccactgagagc
gaggatgaaagtgagaatgtggcaaacacagatgttgcacaggctcacagcaaaggtgac
aagtctaattcagaggtagtggataatgctgacagtcacagagaggaggaggtgttacct
gacaacagtggtggaagctgtacaccagttagagattcccataatagatccaagaatttg
gagagcaggcggaaaacaagcccttatttcagtgggaaacatctcaaagatggactcagc
ccacccaggagaaaatctctcagaaaatggacacctcccaggtctcccttcaacctcata
caggaaacccttttccatgacccctggaagctcctggtggccactatttttctgaataag
acaagtggaaaaatggccattccagtgctttgggtgttctttgagcgctacccgtctgca
gaggtgacccgggaggcagactggaagcccatgtctgaactcatgaagccacttgggctc
tatgagcttcgagccaaaacaatcatccgcttctccgatgagtttttaaataaacagtgg
cgttaccctattgagttgcatggtattggcaagtacgggaacgactcctacaggatcttc
tgtgttgatgagtggagacaggtgactcctaaagatcacaagttaaataaataccatgcc
tggctgtgggagaaccataaaacattgggaatctga
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