Xiphophorus maculatus (southern platyfish): 102217643
Help
Entry
102217643 CDS
T02923
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102217643
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
102217643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
102217643
NCBI-ProteinID:
XP_014330767
Ensembl:
ENSXMAG00000006294
LinkDB
All DBs
Position
17:19591320..19608561
Genome browser
AA seq
910 aa
AA seq
DB search
MVQLSPSHTLPVTQDSADGEDRHGEQLDTISSPKVEDLPEGLNSPQVSLEVSTAYHGYET
YIEDGLICLKHKVRNLEKKKLKLKDYQKRLRQGEVLNKDQMVAVEKYDEVLHNLEFAREL
HKTLDGLTQNLLKAQRKVVKKEQIANMETERRRLALVLQFQHLLGGLQQEHIRKDIMAGR
NHAPYIPAHQLHSLNQLAAMMGIKRDGRMSLAEQMDQAALVYIDLLDGRDKPVAGSTYKL
LKDELIRLLKYNFFSCLPPPPKASELSLTSANPSALKSMPKENSKELFNRLYLTDLETLN
SQNWKEDFQAVREQEPPDSWDSEFPDGPLSSQIAVNKPWKGAATFIPKVVQVPSKKHSTE
SKQRKEKKTKGQQNAKLPNQMNLLVEVFSSPSALPKDPVLRKQHLEDLMTKIHGSFSFMQ
DSLLDGETSETNCTPRLNRCSSGALSPLAQGCLRSPSDILAKTMHSTPLPPRLMDRKASV
TVVDSNVETGGLEPSSNNHSQVSIKLVDRKGYSSPPLFHGEATIADQEENCTPGTESGKQ
SPCNGLRSNTSTPPQADSFSTPPMRRALTTSQFHSVFKVATSSPQNGELHYKSHTAVCSR
SKYSTTSTQTPPEFAPPDDEPQMVYQSEYSAVNSGQMFLSPGQTGGGLNRSSQSYSRGSV
RGMARGGKGLAQNCRSSGWHRGGSYIPPAHLRESVPLLYAARDSGYQHVYRRGGVKHGSA
AWSDSSQVSSPDRDGAFTVVDSGHGDSLSVSTVEVPLTPHSHPPTALLPMPLYPLSQPLR
VAFTASRTANFAPGNLDQPIVFDQLHSNLGEMYDTHIGRFTCPVNGTYVFIFHILKLAIS
VPLYVNLMRNEEVMVSAYANDGAPDHETASNHAILPLFQGDQVWLRLHRGAIYGSTWKYS
TFSGFLLYQD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccgtctcataccctgcctgtgacccaggactcagctgatggggag
gacaggcatggggagcagctggatactattagtagcccgaaggtggaggacctgccagag
gggctgaacagccctcaggtcagtctggaggtgtccacagcctaccatggctatgaaaca
tatatagaagatggcctcatctgcctgaagcacaaagtccgtaacttggagaaaaagaag
ctgaagctgaaggactaccagaagaggctgagacagggggaggtgctcaacaaagatcag
atggttgctgtagagaagtatgacgaggtgctccataacctggagtttgcacgggagctg
cacaaaaccttggatggtcttacccagaatttgctgaaggcacagaggaaggtggttaaa
aaggaacaaattgcaaatatggagactgagaggaggcgtctggccctggtgcttcagttt
caacaccttcttggtggcctacagcaggagcacataaggaaagacatcatggcaggacgc
aatcatgcaccctacatcccagctcaccagctgcacagcctgaaccagcttgctgctatg
atggggatcaaaagggatggcagaatgagcttggcggagcagatggaccaagctgccctc
gtctacatagaccttctggatgggagggacaaacctgtggctggatccacatataagctg
ttgaaagatgagctcatcagactgttaaagtacaatttcttcagttgtctcccacctcca
cccaaggcttcagagttgtctctgacctcagccaacccgagtgccttaaaatcgatgcct
aaagaaaattcaaaggagcttttcaacaggctctacctgactgatttggaaactttgaac
agtcagaactggaaggaggactttcaggctgtgagagagcaggagcctccagatagctgg
gattcagaattcccagatggacctctgtcatctcaaattgcagttaacaaaccatggaaa
ggggctgccactttcatacccaaggttgtccaagtcccctctaaaaaacactctactgaa
agcaaacagagaaaagagaagaaaaccaaaggacagcaaaatgccaagttgcccaaccaa
atgaatttacttgtggaagttttcagctccccctctgccttacccaaagaccccgtactg
cggaagcagcaccttgaggacctcatgactaagatccatggctccttcagttttatgcag
gactccctcctagatggtgagacctctgagaccaactgtactcccaggctaaataggtgc
tcatctggagcactctctcctctagcccagggatgcctgagaagcccttctgatatcctg
gccaaaacaatgcattctaccccattacctcccaggctgatggatcgcaaagccagtgtg
acagttgttgattcaaacgtggagactggaggcctggagccatcctcaaacaaccactcc
caagtgtcaataaagctggttgacagaaaagggtattcctcaccaccacttttccacggg
gaggctaccattgcagaccaggaagagaactgtactccaggaaccgagtcagggaagcag
tctccctgtaacggactgagatccaacacctccactccacctcaggcagactctttctct
acacctcccatgaggcgagctctcactacatctcagtttcactctgtcttcaaggtggcc
acatcttcaccccaaaatggagaactgcactacaaatcccacactgcagtttgttccagg
tccaagtacagcaccaccagcacccaaacacccccagagtttgcgcccccagatgatgag
cctcagatggtgtatcagtcagaatactcggctgttaacagtggacagatgttcctgtcc
cctggccagacaggtggaggtttgaatcgaagcagtcagtcctacagtagaggatctgtc
agaggtatggcacgtggtggcaagggactggctcagaactgtcggtcctctgggtggcac
agaggaggatcctacatccctcccgctcacctcagggagtctgttcctcttctctatgca
gctagagactcaggatatcaacacgtatacaggcgaggaggagtaaagcacggctctgca
gcctggagtgactcttcccaggtgagcagtccagaccgggacggagcctttactgttgtg
gactctggtcatggggattccttatctgtatcgacagtggaggtcccactgactccacac
agccatccgcctacagccttactccccatgccgctttacccgctctcgcagccactgcgt
gtggccttcactgcctctcgcactgccaactttgcacccggcaaccttgaccagcccatt
gtgttcgaccaattgcatagcaacctgggggagatgtacgacacccacattggtcggttc
acctgtcctgtgaacggaacgtacgttttcatttttcacatcctgaagctggccatcagc
gtccccctctatgttaacctcatgcgcaacgaggaggtgatggtatctgcgtatgccaat
gatggagcccctgatcatgagaccgccagcaatcatgccattttgcctcttttccaagga
gaccaggtgtggctcaggctgcaccgtggtgccatctatggcagcacgtggaagtacagc
acattttcaggcttcttactttatcaggactga
DBGET
integrated database retrieval system
