Xiphophorus maculatus (southern platyfish): 102217650
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Entry
102217650 CDS
T02923
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04080
Neuroactive ligand-receptor interaction
xma04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102217650
04082 Neuroactive ligand signaling
102217650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102217650
Ion channels [BR:
xma04040
]
Ligand-gated channels
GABA-A
102217650
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
102217650
NCBI-ProteinID:
XP_005795551
UniProt:
A0A3B5QE35
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Position
23:19463538..19470359
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AA seq
446 aa
AA seq
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MAADPLSVAALICLISVANAQGGEKVYSDNITLILDRLLDGYDNRLRPGSGGGITEVKTD
IFVTSFGPVSDVEMEFTMDMFFRQMWVDERLKFEGPIEILRLNNRMVDKIWTPDAFFRNS
KKSISHNMTTPNKLFRIMQNGTVLYTMRLTISAECPMNLMDFPMDGHACPLRFGSYAYTN
SEIIFTWRKGLAGSVECPKESISLLQYDLVGQILSSEIMRLNTGQYSVQVVHFLLQRKLG
YYLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVAYAT
AMDWFIAVCFAFVASALVEFAAVNYFATLQANRLKKQRARQDRLEVLATGSDDDDTISTD
SSHQEGLKRRNHSVSCSEVGYTPPVPIFLQQGSAFPQIPQLAGTSPIDLYARILFPLTFA
LFNLGYWYIYLTKETIESATAMDLKN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaccctttatctgtggctgctctaatctgcttgattagtgtagctaatgca
caaggaggtgaaaaagtatactcagacaacatcactctcattttggatagacttttggat
ggttatgacaacagactgcgacccggttcaggaggtggtattacagaggtgaaaacagac
atctttgttaccagttttgggcctgtttcagatgttgagatggaattcaccatggacatg
ttcttccgtcagatgtgggtcgatgagcggctgaagtttgagggccccattgaaatctta
cgtcttaacaaccgcatggtggacaagatttggacaccagacgccttttttagaaattca
aagaagtccatttcccataatatgaccacacccaacaagctcttccgtataatgcagaat
gggactgtcctctacaccatgagactaacaatcagtgcagagtgtccaatgaacctcatg
gatttccccatggatggccacgcctgtcctctcaggtttgggagctatgcgtacaccaac
agtgaaattattttcacctggaggaaaggattagcaggctctgtcgagtgtcccaaagag
tcaataagtcttctgcagtacgatctggttggacagatcttgtccagtgagataatgagg
ttaaacacaggtcagtattctgtgcaggtggtccatttccttctccagagaaagctcggc
tactacctcatacagacctacatccccctaatcatggtagtcgtgctgtcgcaggtttcc
ttttggatcaacaaagagtctgttccagcacgtacagtcgctggcatcaccacggtgctg
accatgaccaccttgagcatcagtgctcggcagtctttgcctaaagtggcttatgctaca
gccatggactggttcatcgctgtgtgtttcgccttcgtggcctctgccctcgttgagttt
gcagcagtgaactactttgccaccttgcaggcaaaccgcctgaagaagcagagagccaga
caagacaggctggaggtgctggccactggcagtgacgatgacgacacaatatctacggac
agcagccaccaagaaggcctgaagaggagaaaccactcagtgagctgcagcgaggttgga
tatacccccccagtgcccattttcctccagcagggctcggcttttcctcaaatccctcag
cttgctggaacaagtccgattgacctctacgcccgcatcctctttcccctgacctttgcc
cttttcaacttagggtattggtacatatatctgaccaaagaaaccattgagtcggctacg
gccatggatctgaaaaactga
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