Xiphophorus maculatus (southern platyfish): 102217654
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Entry
102217654 CDS
T02923
Symbol
ptch2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102217654 (ptch2)
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Ortholog
Paralog
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Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
102217654
NCBI-ProteinID:
XP_014328026
Ensembl:
ENSXMAG00000015720
UniProt:
A0A3B5QTI9
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All DBs
Position
6:complement(14068375..14095416)
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AA seq
1487 aa
AA seq
DB search
MASDRGVPGSGVFGDLPPSYTRSQPPAHPDLQRRPSYCHAAFALKQISKGKAVGQKAPLW
IRARFQAFLFSLGCHIQRHCGKVLFIGLLVFGALSVGLRVAAIETNIEQLWVEAGSRVST
ELRYTREKQGEESVFTSQMLIQTPKEEGTNILTQEALLVHMEAALSASKVQVSLFGKSWD
LNKICYKSGVPIIENVMIERMIDKLFPCMIITPLDCFWEGAKLQGGSAYLPGMPDIQWMN
LDPVKLMEELGQYTSLEGFKEMLDKAQVGHAYMDRPCLDPSDPDCPLSAPNKEQEDSPDI
AGRLQGGCHGFSQKFMHWQEELILGGRVKSSQDALLSAEALQSMFLLMSPKQLYEHFKDD
YEIHDINWNEEKATAILESWQRKFVEVVHQSIPGNSSQSIHAFSTTTLNDIMKSFSDVSV
IRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNAAT
TQVLPFLALGIGVDDMFLLAHSFTEAGSNIPFKERTGDCLRRTGTSVALTSINNMIAFFM
AALVPIPALRAFSLQAAIVVVFNFAMVLLIFPAILSLDLHRREDKRLDILCCLYSPCADR
VIHLSPHELSEAGEQSQAPGSGTAHAHQYAAGPTITTSTQITTTVQAFTQCDAAGQHIVT
ILPPTSQISTSSPSIIVCPTTQTQAASPSPTTTSVPDHYGSQLFTPTSSSTRDLLAQVED
SKSGKECVPLPFLHWNLSKFAREKYAPLLLKPKSKVAVVVLFLGLLSLGLYGTTMVHDGL
YLTDIVPRDTKEYDFIDAQFKYFSFYNMYLVTMDGFDYARSQRLLIQLHNAFNSVKYVVR
DGDNKLPRMWLHYFQDWLNGLQAAFDADWQAGRITVDSYRNGTEDGALAYKLLIQTGSKK
EPFNHSQLTSRRLVDGEGLIPPEVFYIYLTVWVSNDPLGYAASQANFYPHPREWIHDKYD
TTGENLRIPSAEPLEFAQFPFYLNGLRQASDFVEAIESVRAICDEFSRKGVLNYPNGYPF
LFWEQYIGLRHWFLLSISVVLACTFLVCAILLLNPWTAGIIVFILAMMTVELFGIMGLIG
IKLSAIPVVILIASVGIGVEFTVHIALGFLTAIGNRNKRTAVALEHMFAPVVDGAISTLL
GVLMLAGSEFDFIMRYFFAVLAILTVLGMLNGLVLLPVLLSMLGPPAEVTPVDNASCLPT
PSPEPPLPPPMAHHGYFTAHNHPRSPRQQAFSESSDSEYYSEVTTTSGIGEEDYKYCDRN
AYQTTAPSTTSHILVEASKNPSFPKLTVLKPFRENAVGGRVEPLCESNHNLQPPVGSQVT
CWDGNKREQQSDLQRLQDQSPQRLPSDKAHFPGRTCQSGPRLQNSRGPQPNRTKGPSYGH
SNSSLPMQQGPSGGPVTMVTATASVTVAVHPTLPGTAYQGYMHEGFDVDSESDCFEAAKR
TCGNKTKYSACNRDSLELQDLEVTQVQTEYQLGKSQGGLRIQASKDC
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggatcgcggggtcccagggtccggcgtctttggagatttacccccgagttat
acgcgctctcagccgcctgcgcacccagacctgcagcggagacccagctactgccatgcc
gctttcgcacttaaacagatctcaaagggaaaggcagtaggtcagaaagctcctctatgg
atccgggcgaggttccaggccttcctgttctctctgggctgccacatccagaggcactgc
gggaaggtgctctttattggactcttggtgttcggggctctgtctgtgggactccgggtg
gcagccatcgaaaccaacatcgagcagctctgggtggaagctggcagtcgggtgagcaca
gagcttcgctacaccagagagaagcagggagaggagtcggtgtttacctcgcagatgctc
atccagacacccaaagaagagggcacgaatattttgacgcaggaggctttgctggttcac
atggaggccgcactgtcggccagcaaggtgcaggtgtcgctgtttggaaaatcgtgggat
ctcaataaaatatgctacaaatcaggagttcctattatagaaaatgtcatgattgaaagg
atgattgacaagctattcccatgtatgataatcactccattggactgtttctgggaaggg
gccaaactacaaggaggttctgcctacttaccgggcatgccagatatccagtggatgaat
ttagatcctgtcaagctgatggaagagctgggccagtacacatccctggaaggttttaaa
gagatgttggacaaagcccaggtgggacacgcctatatggacaggccgtgcctcgaccca
tcagacccggactgccctctcagtgcccccaataaggaacaggaagacagtccggacatt
gccgggcgtctccagggtggatgccacggcttcagtcagaagttcatgcactggcaggag
gagctcatcctgggagggcgtgtcaaaagcagccaggatgccctactaagtgcggaggct
ctccaatccatgttcctgttgatgagtcccaagcagctctatgaacacttcaaggacgac
tatgagatccacgacatcaactggaatgaggaaaaggccaccgccatcctcgagtcctgg
cagaggaagtttgtggaggtcgtccaccagagtattcctggtaattccagtcagtctatc
catgccttctccacaaccaccctcaacgacatcatgaagtccttctctgacgtcagtgtc
atcagagtcgctggaggatacttgctcatgttggcctatgcctgtgtgacgatgctcagg
tgggactgtgccaagtcgcagggggctgttggactggcgggggtgctgctggtagccctg
tcggtggcagcaggactgggactctgctctctacttggcctctctttcaatgctgctact
acacaggtgcttcccttcctggcactggggattggtgtagatgacatgtttctgttggcg
cactccttcacggaggcaggaagtaatatcccctttaaggagcggacaggagactgcttg
cgtcgcaccggcacaagtgtggctctgacttccataaacaacatgattgcattcttcatg
gctgccctggtgcccatcccagccttgcgggcattctctctgcaggcagccattgtggtg
gtgtttaattttgccatggtgctgctcatcttccctgccatcctcagcttggacctccac
cggcgcgaggacaaacgcttggacatcctctgctgcctgtacagcccgtgcgctgatcgc
gtcattcacctctcgccgcatgagctgtcagaagccggcgagcagtctcaggcgcccggg
tcggggacagcgcatgcgcaccagtatgctgcaggaccgacaatcaccaccagcacccag
atcaccacaacagtgcaagcgtttacacagtgcgacgcagcgggtcagcatattgtcaca
attctgccaccaacttcacagatctccacaagctctccctccatcattgtctgccccacc
acacagactcaggctgcgtcaccttccccgaccaccacctctgtgccagaccactacggc
tcccagctcttcaccccgacttccagctccacgcgggacctcctagcccaggtcgaagac
tccaaatcggggaaggagtgcgttccactccccttccttcactggaacctgtctaagttc
gcccgggaaaagtacgctcccctgcttctgaagcccaagagcaaagtcgcagtggtggtt
ctcttcctgggacttctcagcctcgggctgtacgggaccaccatggtgcatgacggcctc
tacctgaccgacatcgtgccccgtgataccaaggagtatgacttcatcgatgcacagttc
aagtacttctccttctacaacatgtacttagtgacgatggatgggttcgactacgcccga
tctcagaggctgctgattcagctgcacaacgccttcaactctgtcaaatacgtagtccga
gacggcgacaacaagctgccccgcatgtggctgcactacttccaggactggctgaacggt
ctccaggctgcttttgatgctgactggcaggcgggccggattacagttgacagctacagg
aacggcaccgaagatggagctctggcgtacaagctgctcatccagacaggctccaagaaa
gagcctttcaaccacagccagttgacttctcgccggctggtggatggcgagggtttgatc
cccccggaggtgttttacatttacctgaccgtgtgggtcagtaatgatcccctgggctat
gccgcatcccaggccaacttctatcctcaccccagagagtggattcatgacaagtatgac
accacaggagaaaatctgcgcatcccctcagcggaacccctggagtttgctcagtttccc
ttctacctgaatggccttcggcaggctagtgacttcgtggaggccatcgagagtgtgcgt
gccatttgtgatgagttcagccgcaagggcgtgctcaactaccctaacggttaccccttc
ctgttctgggaacagtacatcggcctccgtcactggttcctgctgtcaattagcgttgtg
ctggcctgtaccttcctggtatgcgccattctcctgctcaacccctggacggctggcatc
attgtgtttatcttggccatgatgacggtggagttgtttggcatcatgggcctgattggc
atcaagctcagtgccattcctgtggtcatcctgatcgcatcggtgggcatcggcgtggag
tttacggttcacattgccctgggcttcctgacagcaattggcaacagaaacaagcgcaca
gcggtggcactggaacacatgttcgccccagtggttgatggtgcaatctccacattgctg
ggtgttctcatgctggcgggttcagagtttgacttcatcatgaggtatttttttgccgtc
ctcgccattctgactgttttggggatgctgaatggcttagttctcctcccagtcctcctc
tccatgctgggccctccagctgaagtcaccccagttgacaatgccagctgcctgccgaca
ccttctcccgagccaccgctgcctcctcccatggcccaccacggatacttcacagcccac
aaccatccacgctcgccacggcagcaagcgttttctgagtcgtcagattctgaatactac
tccgaggtgacgacgacctctgggatcggggaggaggactataagtactgtgacaggaac
gcgtaccaaacgacagctccttccacaacgtcccacatactggtggaagccagcaagaac
ccaagcttccccaaactaacagtgctgaagccctttagggaaaacgcagtcggtgggagg
gttgaaccgttatgtgaatccaaccacaatctgcaaccacctgttggctcccaggtaaca
tgctgggatggaaacaagcgtgagcagcagagcgatctccagagactgcaggatcagtcg
cctcaacgcttacccagcgacaaagctcatttccctgggaggacttgtcaaagtggcccc
aggctgcagaacagcagagggcctcagccaaacaggactaaagggccgagctacggtcac
agcaactcttccctgccaatgcaacaaggcccctctgggggccctgtcaccatggtgact
gctacagcctccgttacggtggctgtgcacccgacgttaccggggacagcttatcaaggc
tacatgcatgaaggttttgacgtggacagcgagtcggactgttttgaagctgctaaaagg
acttgtggcaacaaaacaaaatattctgcatgtaacagagactctctagagctccaagac
ttggaggtgacacaggtccagacggaatatcaactcggcaagtcacaaggtgggctgagg
atccaggcatctaaagactgctag
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