Xiphophorus maculatus (southern platyfish): 102217698
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Entry
102217698 CDS
T02923
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03030
DNA replication
xma03410
Base excision repair
xma03420
Nucleotide excision repair
xma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102217698 (rfc3)
03410 Base excision repair
102217698 (rfc3)
03420 Nucleotide excision repair
102217698 (rfc3)
03430 Mismatch repair
102217698 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xma03032
]
102217698 (rfc3)
03036 Chromosome and associated proteins [BR:
xma03036
]
102217698 (rfc3)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102217698 (rfc3)
DNA replication proteins [BR:
xma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102217698 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
102217698 (rfc3)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102217698 (rfc3)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102217698 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
102217698 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
ABC_tran
Rep_fac_C
Motif
Other DBs
NCBI-GeneID:
102217698
NCBI-ProteinID:
XP_005808485
Ensembl:
ENSXMAG00000008507
UniProt:
A0A3B5RF07
LinkDB
All DBs
Position
11:30118321..30122664
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWLDKYRPTSLGKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLKELY
GPGVEKLRIEHQTIVAPSKKKIEINIIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMTTCRLILCSTSTSKVIGPIQSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRRALLMCEACRVQQYPF
SADQDVPEPDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIIKGLVEELL
NNCDGQLKTEVAHLAAYYEHRLQLGSKAIYHLEAFIAKFMAMYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtggctggataaatatcgaccgacgtctcttgggaaacttgactatcacaaa
gaacaagcgactcaactgaaaaacctggttcagtgcggcgactttcctcacttgttggtg
tacggaccatcaggagcggggaaaaaaacccgcatcatgtgtttgctgaaagaactgtat
ggaccaggggtggagaagcttcgcatagagcatcaaactattgtggctccatcaaaaaag
aaaattgagatcaacataatagccagcaactatcacttagaggttaacccaagtgatgca
ggaaaccaggatcgtgtggtgatccaggagctgattaaaactgtggcccagtcccagcaa
atccagtccagcactcagagagagttcaaagtggtgctgcttacagaggtggacagactt
actaaggatgctcagcatgccttgcgacgcacaatggagaagtatatgactacctgtcgt
ctcattctctgctcgacatccacctcgaaggtcatcgggccgatccagagccgatgtctg
gctgtcagagttcctctgccgagcacagaagaggtgtgcagtgttctgacgtcggtctgt
aaaaaggaaggtctgctgctgccgcctgagctggccaagcagatcagcgaaaagtcgggt
cgcaacctccgcagagctcttctgatgtgtgaggcgtgcagagtgcagcagtatccattc
tcagcagatcaggatgtgccagagccggactgggaggtctacctgagagaaactgctaat
gccatcgtcagccagcagagtcctcagaggttgttggaggttcgagccaggctgtacgag
ctgctaacgcactgcatccctcctgatatcatcataaagggtttagtggaagaactactg
aataactgcgacgggcagctaaagacggaggtggcccacctggctgcttactatgagcac
cgactccaactgggcagcaaagccatctaccacctggaggcgtttattgcaaagttcatg
gccatgtacaagaagtttatggaagacggcctggacgccatgatgttttga
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