Xiphophorus maculatus (southern platyfish): 102217729
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Entry
102217729 CDS
T02923
Name
(RefSeq) LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102217729
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102217729
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102217729
BRITE hierarchy
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102217729
NCBI-ProteinID:
XP_023183500
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All DBs
Position
22:complement(2857192..2878954)
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AA seq
537 aa
AA seq
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MSCYTVTLPGPGPWGFRLQGGKDFNMPLTVSRISPGSKAAQGNLIQGDVIVAIDGVSTEG
MTHLEAQNKIKMAHHSLALTMTKSKRPVPMALPRMDAVIPMIPHQQVFCPAPPNAGFSPG
VLKDSGLSAQKTIEVTGPGGKATIIHAQYNTPISLYSQDAIMDTIAGQSQSKGHDAGQYG
MAPPTHQAPPPQQYQAMPQQFQPMPPLYQQPPPLQAPPTQQSSIEIPVGSAPPKVVSTAC
IFPSQPAPVPPQPRPAAAAPAPPPAAPPPGSSTANRPPWVTDTNFADKFDPGKTTSSSMK
VQPLPQAAPPPPAYIPNPSPAGPPTPSPAPVTPSPAPFLPVARGVAQRAERFAASSRTPL
CSACNSVIRGPFLVALGRSWHPEEFNCHYCHVSLADVSFVEEQNNVYCENCYEEFFAPTC
ARCNTKIMGEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYVALFSTKCH
GCDFPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagctgctacacggtgaccctgccgggccccgggccctggggcttcaggctgcagggg
ggcaaggacttcaacatgccgctgaccgtctccaggatctcgccgggcagcaaggcggcg
caggggaacctgatccagggcgacgtcatcgtggccatcgacggcgtcagcaccgagggg
atgacccacctggaggcccagaacaagatcaagatggcgcaccacagcctggcgctcacc
atgaccaagtcgaagcgtcccgttcccatggcgctgcccagaatggacgccgtgattccc
atgatccctcaccagcaggttttctgccccgctcctcccaatgccggcttcagccccggc
gtgctgaaggactcgggcctgtcggcccagaagaccatcgaggtgacgggtccaggcggg
aaggccaccatcatccacgcccagtacaacacgcccatcagcctgtactcacaggacgcc
atcatggacaccatcgccggccaatcgcagtccaagggacacgatgctggccagtacggg
atggccccgcccacgcaccaggctccaccccctcagcagtaccaggcaatgccgcagcag
ttccagccgatgcccccgctctaccagcagccccccccactccaagccccgcccacccag
cagagctccatcgagatccccgttggctccgcccccccgaaggtggtcagcacggcctgc
atcttcccctcccagccagctccagtcccgccccagccccgccctgcagcagccgcgccg
gccccgccccctgccgctcctcctccgggttcctccaccgccaaccgaccgccctgggtg
accgacaccaacttcgccgataagttcgaccctggaaagaccacctcctcctccatgaag
gtccagccgcttcctcaggcggccccgcccccgccggcgtacatccctaacccgtccccc
gccgggccgcccactcccagccccgcccctgtcacaccgagccccgcccctttccttcct
gtggcaaggggtgtggctcaaagagcagagaggtttgccgccagcagccgcacgcctttg
tgttcagcgtgcaacagcgtcattaggggccccttcctggtggccctcggccggtcctgg
caccccgaggagttcaactgccactactgccacgtctccctggccgacgtcagcttcgtg
gaggagcagaacaacgtctactgtgagaactgctacgaggagttcttcgctccaacctgc
gcccgctgcaacaccaagatcatgggggaagtgatgcacgccctgcggcagacgtggcac
accacctgcttcgtgtgcgccgcctgcgggaaaccgtttggaaacagcctgttccacatg
gaggacggggagccgtactgcgagaaagattacgtcgctctgttcagcaccaagtgtcac
ggctgcgacttcccggtggaggctggagataagttcatcgaggctctgggacacacctgg
cacgacacctgtttcgtgtgcgcggtgtgccacgtgaacctggagggtcaacccttctac
tccaagaaggacaagcctctgtgcaagaagcacgcccacgccatcaacgtgtag
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