Xiphophorus maculatus (southern platyfish): 102217816
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Entry
102217816 CDS
T02923
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102217816 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102217816 (myo5b)
04131 Membrane trafficking [BR:
xma04131
]
102217816 (myo5b)
03029 Mitochondrial biogenesis [BR:
xma03029
]
102217816 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102217816 (myo5b)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
102217816 (myo5b)
mRNA cycle factors
P-body specific factors
102217816 (myo5b)
Membrane trafficking [BR:
xma04131
]
Others
Actin-binding proteins
Myosins
102217816 (myo5b)
Mitochondrial biogenesis [BR:
xma03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
102217816 (myo5b)
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
102217816 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
102217816
NCBI-ProteinID:
XP_023194108
Ensembl:
ENSXMAG00000013502
LinkDB
All DBs
Position
8:complement(864233..892174)
Genome browser
AA seq
1821 aa
AA seq
DB search
MASDYNPYCKLTRVWVPDPDDVWKAAEITRDYKEGEAVLHLQLEDGTPLEYQVGPKANAL
PFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNNIYTYCGIVLVAINPYEQLQIY
GEEVITAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSSSDANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANM
RTYLLEKSRVVFQAEEERNYHIFYQLCASASLPEFKDLSLMSAEDFTYTSLGENIFIEGV
NDADDFKKTREAFTLLGIKESSQSSIFKIMASILHLGNVEIVSERDGESCHVARNDVHLQ
HFCRLLGVELKQMDHWLCHRKLATASETFVKTMSCQQAINARNALAKHIYAHLFDWIVEH
INKALHTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQDEYM
KEDIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQHSSSGHFQ
KPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASEFQLVADLFQDKSDAP
PSKASKVNVRSLKTVPKVPNKEHRKTVGHQFRSSLHLLMDTLNATTPHYVRCIKPNDLKE
AFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYWVLMRKSDLTSADKKQVC
KNLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRTDKFRSACIKIQKTVRGWLQRIRYR
RVRRAAIGLQRYGRGYLARRYAEFLRQNRAALICQKQYRMVRERRKFLRIRRATVTIQAY
ARGMFTRRIFWEFMLHHKAMLIQKHVRGWLQRKKFRQALDAAIIIQCAFRRMQAKRQLKQ
LKIEARSAQHLKKLNTGMENKIVQLQRKMDEQSKELKTQNEQLVTANASLGSEVTKLQKQ
LEQVRSQQPDGGQVESLQEEVERLREELQEAQAHRKRMEEEHGNEKLSLSQRVEELEAEN
ALLKVEKDELNRRIQQQTMNSAAKESSASLEMELNQLRERYQDLIKEYSRLERRYDNLKE
EMDLSKFQPGHHRNPSNQSSLESDSNYSSVDKYVGETDDSIQQVKEMGEENAAMDISLFM
KLQIRVRELETERKRLQVNLDKMEEQAKCKGPEPKTPTSDVATGDLVYNNLKRQELETEN
KKLKNDLNELRKTIAERATQDGSSNELQDEYNLLLSQLKSANEELDARKEEVLILRTQIV
SNAKKNSEPNESEVDGGLNSSKEPLDKEEALKAYHGLCESKKLLEAQLQTQTRQHRDELE
ALHTQIELLKDDLEKKQELLNYMSTLSPEAKVDYTVQQELTRLTNSNLELKGMVEKMEKN
ERKLRKQLRIYMKKVQELAAQAAAHDVDQNKDEKNKMIQKDIRMTKVKNFEGMLEYLKED
EARLIKTLITDIQPSTVSATVPCLPAYILFMCIRHADYINDDQKVISLLTSSINAIKKVL
KRNNDDFEMISFWLANSSRLLHCLKQYSGEEAFMTQNTTKQNEHCLKNFDLAEYRQILSD
LSIQIYQQLIKVAQGIIQPMIVSAMLESESIPSLAGVKSMGYRNRSSSMDTDADGPTTYT
LQGLIRQLSQFNSIMRDHGLDPEVVGQVARQLFHCINAFTLNNLLLRKDICSWSTGMQLR
YNTSQLEEWLRANNLFQSKASATLEPIIQAAQLLQVKKKTSQDAEAICSLCTALTVQQIV
KILNLYTPLNEFEERVTVSFIRNVQSVLQERNDPPQLLLDTKHTFPVLFPYAPSALSLEA
VRIPPSLGLDFLVRSGPAPSD
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgattataacccctactgtaagctgacccgggtctgggtcccggacccggac
gatgtgtggaaagctgcagaaatcaccagggactacaaggagggcgaggcggttctgcac
ctgcagctggaggacgggacgcccctggagtaccaggtgggtccgaaggccaacgctctg
ccgttcctcaggaatcccgacatcctggtgggggagaacgacctgacggctctcagctac
cttcatgaacccgccgtgctgcacaacctgagggtccgcttcctggagtccaacaacatc
tacacctactgcggtatcgtcctggtggccatcaacccgtatgagcagctgcagatctat
ggggaggaggtgatcaccgcctacagcggtcagaacatgggggacatggatcctcacatc
ttcgccgtggctgaggaagcgtacaaacagatggccagagacgagaagaaccagtcaatc
attgtgagcggagaatctggagcaggaaagactgtttcggcaaagtacgccatgagatac
tttgccacggtgggcggctcctccagcgacgctaacgtggaggagaaggttctggcctcc
aaccccatcatggaggccatcgggaacgccaaaaccacccgaaacgacaacagcagccgc
tttggcaagtacattcagatcggcttcagcagacattaccacatcattggagccaacatg
aggacctacctgctggagaaatcccgcgtcgtcttccaggctgaagaagagaggaactac
cacatcttctaccagctatgcgcctcagccagcctgccagagttcaaagacctcagtctc
atgagtgcagaagatttcacctacacgtctctaggagagaacatcttcatcgagggagtt
aacgatgctgacgacttcaagaagaccagagaggctttcacactgctgggcataaaggag
agcagtcagagcagcatctttaagatcatggcctccatccttcaccttggcaacgtggag
atcgtctctgagcgggacggagagtcctgccatgtcgcaaggaacgacgtccacctgcag
cacttctgcagactgctgggtgtggagctgaagcagatggaccactggctctgccaccgg
aagctggccaccgcctctgagacgttcgtgaagaccatgtcctgccagcaggccatcaac
gcccgcaacgccctcgccaagcacatctatgcccacctcttcgactggatcgtggagcac
atcaacaaggcgctgcacacctccagcaagcagcactccttcatcggggttctggacatc
tacgggttcgagacattcgaggtgaacagctttgagcagttctgcatcaactacgccaac
gagaagctgcagcagcagttcaactcgcatgtcttcaaactggagcaggacgagtacatg
aaggaggacattccctggacactcatcgacttctacgacaaccagccctgcatcgacctg
atcgaggcccggctcggcatcctggacctgctggacgaggagtgcaaggttccgaaggga
acggatcagaactgggcccagaagctctacaagcagcactccagcagcgggcacttccag
aaacccagaatgtccaacacgtccttcatcatcatccacttcgctgacaaggtggagtat
cagtgcgaaggcttcctggagaagaacagagacactgtctacgaggagcagatcaacatc
ctgaaagccagcgagttccagctggttgctgatctgttccaagacaagagcgatgctccg
ccctccaaagcctccaaggtgaatgtccgctccctgaaaacagttcccaaagtccccaac
aaggagcacaggaagactgtgggacaccagttccgctcgtcgctccacctgctgatggac
accctgaacgccacgacgccgcactatgtacgctgtatcaagccgaacgacttgaaggag
gccttctcgttcgactcccggcgggccgtgcagcagctccgggcctgcggggttctggag
acgatccggatcagcgccgctggatacccgtccaggtggacctatcccgacttcttcagc
cggtactgggttctgatgagaaagtcagacctgacgtcagcagacaagaagcaggtgtgc
aagaacctcctggagacactgatcaaggaacccgacatgttccagttcgggaagacgaag
atcttcttccgggccggccaggtggcctacctggagaagcttcggaccgataaattccgc
tctgcctgcatcaagatccagaagacggtccgcggctggctgcagaggatccggtaccgc
cgggtccgccgggccgccataggcctgcagagatatggccgaggttacctggcccgcagg
tatgcagagttcctgcgtcagaaccgggccgccctgatctgtcagaaacagtaccgcatg
gtccgagagcggaggaagttcctgaggatccggcgggccacggtcaccatccaggcctac
gcccgaggcatgttcacccgcaggatcttctgggagttcatgctgcaccacaaggccatg
ctgatccagaagcacgtgcgcggctggctgcagaggaagaagttcaggcaggcgctcgac
gccgccatcatcatccagtgcgccttcaggaggatgcaggccaagcggcagctgaagcag
ctgaagatcgaagcgcgttccgctcagcacctcaagaagctcaacacgggcatggagaac
aagatcgtccaactgcagaggaagatggacgagcagtccaaggagcttaagacccagaac
gagcagctggtgacggcgaatgcctcattggggtcagaggtcaccaagctgcagaagcag
ctggagcaggtccgcagccagcagcctgacggaggccaggtggagtcgctgcaggaggaa
gtggagaggctgcgggaggagctgcaggaggcgcaggcccacaggaagaggatggaggag
gagcacggcaacgagaagctcagcctgagccagcgggtggaggagctggaggcagaaaac
gctctgctgaaggtggagaaggacgaactgaaccgacggatccagcagcagaccatgaac
tctgcagctaaggagagcagcgcctccctggagatggagctgaaccagttgcgggagcgg
taccaggacctaatcaaggagtactccaggctggagcggagatacgacaacctgaaggag
gagatggatctgagcaagttccaacccggccaccacaggaacccgtccaaccagagcagc
ctggagtcggactctaactactcctctgtggacaaatatgtcggagagacagatgactcc
atccagcaggtgaaagagatgggagaggagaacgctgccatggacatcagcctgttcatg
aagctgcagatacgagtgagggagctggagacggagaggaagaggctgcaggtcaacctg
gacaagatggaggagcaggccaagtgcaagggtccggagcccaagaccccaacgtctgat
gtggcaacaggagatctggtctacaacaacctgaagagacaggagctcgaaactgagaac
aagaaactgaagaacgacctgaacgagctgaggaagaccatcgccgagcgggcgacgcag
gacggctcgtccaatgagctgcaggacgaatacaacctgctgctcagtcagctgaagtca
gccaacgaggagctggacgcccggaaggaggaggtgctcatcctcaggactcagatcgtc
agcaacgccaagaagaacagcgaacccaacgaaagtgaggtggacggaggactgaacagc
agcaaggagccgctggacaaagaggaggccctcaaagcgtaccatggactgtgtgagtcc
aagaaactgctggaggcccagctgcagacccaaacccggcagcaccgggacgagctggag
gctctgcacacccagatcgagctgctgaaggacgacctggagaagaagcaggagctgctc
aactacatgtccactctgtcccccgaggccaaggtggactacaccgtccagcaggagctc
acacggctcaccaacagcaacctggaactcaagggcatggtggagaaaatggagaagaac
gagaggaagctgaggaagcagctgaggatctacatgaagaaggtccaggagctggcagct
caagcagcggctcacgatgtcgatcagaacaaggatgaaaagaacaagatgatccagaaa
gacatccggatgaccaaggtcaagaacttcgaggggatgctggagtacctgaaggaggac
gaggcccggctcatcaagaccctcatcacagacatccaacccagcacggtgtcggccacc
gtcccctgcctccccgcctacatcctcttcatgtgcatccgccacgccgactacatcaac
gacgaccagaaggtcatctctctgctcacctccagcatcaacgccatcaagaaggtcctg
aagaggaacaatgacgactttgagatgatctcgttctggttggccaacagcagccgcctg
ctgcactgcctgaagcagtacagcggtgaggaggccttcatgacccagaacacgaccaaa
cagaacgagcactgcctgaagaactttgacctggccgagtaccggcagattctgagcgac
ctgtccatccagatctaccagcagctcatcaaggtggcccagggcatcatccagcccatg
atcgtgtcggccatgttggagagcgagagcattcccagcctggccggagtcaagtccatg
ggctacaggaaccgctcgtccagcatggacacggacgcggacgggcccaccacctacacc
ctgcagggcctcatccggcagctcagccagttcaacagcatcatgagggaccacggactg
gaccccgaggtggtgggccaggtggcccgccagctcttccactgcatcaacgccttcacc
ctcaacaacctgctgctgcgtaaggacatctgctcctggagcacgggcatgcagctcagg
tacaacaccagtcagttggaggagtggctgcgagccaacaacctgttccagagcaaagct
tcggctacgctggagcccatcatccaggccgcccagctgctgcaggtcaagaagaaaacg
tctcaggacgccgaggccatctgctcgctgtgcacggctctgaccgtgcagcagatcgtg
aagatcctgaacctctacacgcctctgaacgagttcgaggagcgagtcaccgtgtccttc
atcagaaacgttcagagcgtcctccaggagaggaacgacccgccgcagctgctgctggac
accaagcacaccttccccgtcctgttcccctacgccccgtccgccctcagcctggaggcc
gtgcgcatccccccctccctggggctggacttcctggtccggtccggccccgccccctca
gactga
DBGET
integrated database retrieval system
