Xiphophorus maculatus (southern platyfish): 102217822
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Entry
102217822 CDS
T02923
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102217822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102217822
Membrane trafficking [BR:
xma04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102217822
Protein recycling
Other Rab GTPase associated proteins
102217822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
CSN8_PSD8_EIF3K
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
102217822
NCBI-ProteinID:
XP_005795134
Ensembl:
ENSXMAG00000017545
UniProt:
M4ASY3
LinkDB
All DBs
Position
12:complement(16908476..16914532)
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AA seq
451 aa
AA seq
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MWTDKQRGLRVSQEELLCKNACGYYGNPAWKGFCSKCWRERSRPPGSQRQDTRPSSDGAP
PTFSKFEEKKNIEKGRRISTVRRLFWGSSSPPKPQETSESHTKMLKAYESLEPGDFTGFL
KILRSPSSQRLQSRCTAFLNTMEAYHNLQIQKQSDLVQDFYQSFAEYFRSFPETQVTQIM
EHVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWVTPQMLSVPFPDEDTPVTGDP
FLPAITAIIEMDAKRAPQDKLACVSKCSQHIFEALSTSNNEPANADDFLTSLVYVVLKAN
PPRLHSNMQYMIRFGLPHSLMAGESGYYFTNLSCAVAFIEKLDGPALNLSPEQFDGYMRG
QRAPAALKRQQKANGTQKLLEELQGRQEKLHQGVDALNMHLQKWVQVVNSQLDEATSQFD
KVQKEITAQTEASEVVTSSAEDGSQQKEEEQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagacaaacaaagagggctcagagtttcccaggaggagctgctttgcaagaac
gcctgtgggtattatggaaacccagcatggaaaggcttctgctccaagtgctggagagag
agatcacgcccacctggatcacaaagacaagacacgagacccagcagcgatggagcccca
cccacattctccaaatttgaggagaagaaaaacattgagaagggtcgacgaataagcaca
gtgaggcggctgttctggggcagctcttcacctccaaagccccaagagacctctgaaagt
cacactaagatgttaaaagcctatgagagccttgagcctggagacttcactggttttcta
aagatcctgcggagtccatcttctcagcgtctgcagtcccgctgcacagctttcctcaac
acaatggaggcttatcataatctgcaaatacagaagcagtcagaccttgtccaggatttt
tatcagtcttttgctgaatattttagaagcttcccagagactcaggtcactcagataatg
gagcatgtggagaagcttataatgactcgtttgcacaaatgggttttctgccatgacagc
tgtgatgatgaacagaaggacctggctcttcagcgccgaatacgctccctaaactgggtc
acaccacagatgctgagtgtgccttttccggatgaagacaccccagtcacaggcgacccc
ttcctgcctgccatcacagccataatagaaatggatgccaagcgagcgccgcaggacaag
ctagcctgtgtgtcaaagtgcagtcagcacatttttgaagcgctgtccacctccaacaat
gagcctgcaaacgcggatgacttcctgacgagcctggtgtatgtggtgctgaaagccaat
ccgcctcgcctccactccaacatgcagtacatgattcgttttggcctcccccacagcctc
atggctggagagagcggctactatttcacaaacttgtcctgtgcggtggctttcattgag
aagctggacggacccgcactcaacctcagtcctgagcagtttgacggctacatgcgaggt
cagcgcgctcctgctgcattaaagaggcagcagaaggccaacggcactcagaagctgctg
gaagagctgcaaggaaggcaggagaagctgcaccaaggtgtggatgctctgaacatgcat
ctgcagaagtgggtccaagtagttaattcccagctggatgaggcaacgagccagttcgat
aaggtacagaaggagataacggctcagacggaggcctctgaggttgtgacctcttcagct
gaggatggatcccaacagaaggaggaggaacagtag
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