Xiphophorus maculatus (southern platyfish): 102217831
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Entry
102217831 CDS
T02923
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102217831
Membrane trafficking [BR:
xma04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
102217831
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_EndoS
LRRNT
LRR_LRWD1
LRR_6
LRR_9
V-set
Motif
Other DBs
NCBI-GeneID:
102217831
NCBI-ProteinID:
XP_005797221
Ensembl:
ENSXMAG00000019316
UniProt:
M4AY17
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All DBs
Position
6:complement(11948342..11988035)
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AA seq
622 aa
AA seq
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MTDSPGPGGRALVPWPRVWKWVLASSLVSVIALTLPESSKACPPRCECSAQLRSVSCQRR
RLTNVPEGIPTETRVLDLSKNRLRWVQSGDLAPYPRLEEVDLSENLIATLEPNAFAALQN
LKVLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKMVILLDYTFQDMRNLKQLEVGDNDLV
YISHKAFSGLLGLEDLTIERCNLTSISGQTLSYLHSLVTLRLRHLSITALEDQNFRKLSN
LRGLDIDHWPYLEYISPLSFQGLDLHWLFITNTNITTVPSNSFKNLVHLTHLNLSYNPIT
TLEPWAFKDLLRLKELIMVSTGLLTVESHALGGLRQIRVLNFSSNDLQTLEEGSFHSVNS
LETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLSAFSDSALFDHFT
CQKPKIRNRKMQQVVAREGQPVSFVCRADGDPTPAIIWISPQRRRITAKSSGRITVLPSG
TLEIRYAQLTDSGTYICIATNAGGNDTYFATLTVRGQPLDSASAFFLNRSLYSGEYFNDT
NLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRRNNFTVEYSF
RKSEPTTGSSTGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactgactctccgggtcctggtggtcgtgccttagtgccatggccgagggtgtggaaa
tgggttctggcttcctcgctggtctctgtcatagctttgactttgccagagagcagtaag
gcctgtcctccacgatgcgagtgttcagctcagctgaggtctgtgtcatgtcagcggcgg
cggctcacaaacgtcccagaaggcattccaactgagacacgggtcttggacctcagcaag
aaccggctccgttgggtacagtccggtgatctggcaccgtacccccggctggaggaagtg
gaccttagtgaaaacctcatcgccacattagagccaaatgcctttgccgctcttcagaat
cttaaagtcctaaagttaagggggaatcagctgaagttagtacctatgggggcatttgcc
aagctaggtaatctcaccagcctggatctaagtgagaataagatggtgattttattggac
tacaccttccaagatatgaggaatcttaaacagctggaagttggagacaatgatctggtt
tatatttcccacaaggcattctctggacttctgggactagaagatctcacaatagagcgt
tgtaacctcacttccatctctggccagacgctgtcctacctccacagcctggtcactctt
cgccttcggcaccttagcatcactgccctggaggatcaaaactttcgcaagttgtctaat
ttgcggggtctggatatcgatcactggccataccttgagtatatctctccacttagtttt
cagggccttgatcttcactggctcttcatcaccaacaccaacatcaccactgtcccttca
aattcattcaagaacctggtgcacctcacccatctcaacttgtcctacaatcccatcacc
acactagagccttgggccttcaaggacttgctgaggctaaaggagctcatcatggtaagc
actgggttgctgacagtggagtctcatgcccttggaggtctcagacagattcgagtactc
aacttctcctccaacgacctgcagactctggaagaggggtccttccactctgttaacagt
ctggagaccctcagagtggacgggaatcccttgttgtgtgactgccgtctgttgtggatc
ctgcaaagacgcaagaccctcaactttgacggcagagtgccagtgtgtgcaggcccggtg
gaggtgcaaggagtcagcctcagcgccttctctgactctgccctcttcgatcactttaca
tgccagaaacctaagatccgcaaccgtaagatgcaacaggtggttgctcgggaaggccag
ccagtgagctttgtatgtcgagctgacggagatcctacacctgccatcatctggatctca
ccacagcgtagacgaatcacagcaaagagttcaggtcgcatcactgttctccctagtggt
actctggagatccgctacgctcagctcactgacagcgggacgtacatctgcattgccaca
aatgctggaggcaatgacacctactttgccactctcacagtaagaggccagccactagac
tctgcctctgccttctttcttaaccgctctctgtacagcggggagtacttcaacgacaca
aatctaaacagcacacgggttttcctcaagttcaccttggacctgaccaccattttggtc
tcaacagccatgggttgcatcacgtttctcggagttgttctcttctgcttcctgttgtta
tttgtgtggagccgtggacgcggccagcgcaggaacaacttcacagtggagtactcgttc
cggaaatctgaacccaccacagggagctctacaggagggaccaggaagtttaacatgaaa
atgatatga
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