Xiphophorus maculatus (southern platyfish): 102217855
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Entry
102217855 CDS
T02923
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102217855
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xma04031
]
102217855
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul5 complex
Target recognizing subunit
102217855
GTP-binding proteins [BR:
xma04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
102217855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
102217855
NCBI-ProteinID:
XP_005803253
Ensembl:
ENSXMAG00000013138
UniProt:
M4AFC6
LinkDB
All DBs
Position
16:complement(1562820..1578016)
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AA seq
279 aa
AA seq
DB search
MGSQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANPAGGSKANSLKRSKPIRPPQSPPQNCTRSNCKIS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccagggcagcccggtgaagagctacgactacctgctgaagttcctcctggta
ggagacagcgacgtgggcaaaggggagatcctggacagcctgcaggacggatctgcagag
tctccctatgcttacagcagcgggatcgactataaaaccacaacgatccttctggacggc
aggagggtgaagctggagctgtgggacacgtcgggtcagggtcggttctgcaccatcttc
cgctcgtattcccgcggcgctcaggggatcctgctggtgtatgacatcaccaaccgctgg
tccttcgacggcatcgaccgctggatcagggaaattgacgagcatgcaccgggcgtgccg
cggatcctggtcgggaaccggctgcacctggccttcaagcggcaggttcccacggagcag
gcccgggcctacgccgagaagaacggcatgaccttcttcgaggtcagcccgctctgcaac
ttcaacgtgatcgagtccttcacggagctgtcgcgcatcgtcctgatgcggcacggcatg
gagaagttctggaggcccaacagagtcttcagcctgcaggacctgtgctgcagagccatc
gtgtcgtgcacgcccgtccacctcatcgacaagctgccgctgcccgtcgccatcaagtcc
cacctcaagtcgttctccatggccaacggcatgaacgccgtcatgatgcacggacgctcg
tactcgctggccaacccggccggcggctccaaggccaacagcctgaagcggtccaaaccc
atccgcccgccgcagagcccgccgcagaactgcacccgcagcaactgcaagatctcctag
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