Xiphophorus maculatus (southern platyfish): 102217875
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Entry
102217875 CDS
T02923
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102217875 (ssrp1)
03036 Chromosome and associated proteins [BR:
xma03036
]
102217875 (ssrp1)
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
102217875 (ssrp1)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
102217875 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
102217875
NCBI-ProteinID:
XP_023184726
Ensembl:
ENSXMAG00000009850
LinkDB
All DBs
Position
23:complement(15592777..15605988)
Genome browser
AA seq
710 aa
AA seq
DB search
MGDMLEFNEIYQEVKGSWNDGRLRFSKQNVVYKNNKTGKVDSIPAGELNQAQWRRVCLGH
GIKLGTSTGHVYKYDGFRDTDFEKLSEFFKLNYKMDLSEKDMSVKGWNWGTAKFSGPLLS
FDINDHTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQTDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEEDVEKRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDEDQHDAYLERMKAEGKIREEGNDSDDSDGSGS
DESFNPGEEDEEIAEEYDSNASASDSSDEGDDSEDESAKKKAKKAKVVKEKKERKPRKEK
KQKDKAGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLNKDEKEEWETK
AGEAKRQYDKLKKEYKESGGGSTSSPRKEKRKSGGKKDEKKRKSSGGEKEKERGGNDSFK
SREFIETSDDSSSDSDHKSKSKKKRKKKESEEEEEEEAVSTPASSEEESD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatgctggagttcaacgagatctatcaggaggtcaaaggctcatggaatgac
ggacggctgcgtttcagcaaacagaatgtggtttataagaacaacaagactgggaaggtg
gacagcatcccggccggagagctcaaccaggcgcagtggaggcgcgtgtgtttaggccac
ggcatcaaactcggcaccagcacggggcacgtctacaaatatgacggcttcagggacacg
gactttgagaagctatcagagtttttcaagttgaactacaagatggacttgtcagagaag
gacatgtctgtgaagggctggaactgggggacggccaagttctcaggaccgctgctgtcg
tttgatatcaacgaccacacagcgttcgagatccctctgtccaacgtttcccagtgtgcc
actgggaagaacgaagtcacactggagttccaccagaacgacgacaccgaggtttctctc
atggaggtccgattctacgtcccgcccagtcagactgacgaacgacaagaccctgtggag
gcgtttgcccagaacgttttgtcaaaggctgatgtcattcaggccacaggagacgctgtt
tgtatcttcaaggagcttcagtgtctcacgcccagaggaagatatgatattcggatctat
ccgacattcctccacttgcacggtaaaactttcgactacaagattccctacaccaccgtg
ctgcgactcttcctgctgcctcacaaggatcagcggcagatgttctttgtgatcagtctg
gatcctcccatcaagcagggtcagacgcgttatcacttcctcattctgcttttttctaag
gaagaggatatcaacctaaccctcaacatgagcgaggaggatgtggaaaaacgcttcgag
ggcaaactcagtaaaaacatgtctgggtctctttatgagatggtcagcagggtgatgaag
gccctggtcaaccgcaaaatcactgtgcctggaaacttccaaggccactctggcgctcag
tgcatcacctgctcctacaaggcgtcttcaggcctcctctaccctctggaaaggggcttc
atctacgtccacaagcccccggttcacctgcgctttgaggaaatctcctgcgtcaacttc
gccagaggcaccaccacgacgcggtcctttgactttgagatcgagaccaagcaaggaaac
cagtacacgttcagcagcatcgagagggaggaatatggcaaactgtttgactttgttaat
gccaagaagctcaacatcaagaacagaggcttcaaagagaagaagggcatgaagggcaaa
atcgatgagtacagcgactctgacgaagaccagcacgatgcctacctggagaggatgaag
gctgagggaaagatccgggaggagggcaacgacagtgacgattcagacggaagtggaagc
gacgagtctttcaaccctggagaggaagatgaggaaattgcagaagagtatgacagcaat
gcttctgccagcgacagcagcgacgaaggagatgatagcgaagacgagagcgcaaagaaa
aaggccaaaaaagccaaagttgtgaaagagaaaaaggaaagaaaaccacgcaaagagaag
aagcagaaggacaaagccggccccaagaggccgatgagcgcctacatgctgtggctaaac
tccagccgcgagcgcatcaagtcggagaaccccggcatctccatcacagagatatccaag
aaggccggagagatgtggagacagctgaacaaagacgagaaggaggaatgggaaacaaaa
gcaggggaggcaaagaggcaatatgacaaattaaagaaggaatacaaagaaagcggagga
ggatcgacctccagtcccaggaaagagaagagaaaatctggtggaaaaaaggatgagaag
aagagaaagtccagcggtggagagaaagaaaaggaacgaggaggaaacgacagcttcaag
agccgagagttcattgagaccagcgacgatagttcctccgactccgaccacaagagcaaa
tccaagaagaagaggaagaagaaggagtcagaggaggaagaggaggaggaagctgtatcc
actcctgccagctcagaggaagagtctgactga
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