Xiphophorus maculatus (southern platyfish): 102217932
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Entry
102217932 CDS
T02923
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102217932 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102217932 (trip12)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102217932 (trip12)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
HECT type E3
102217932 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
102217932
NCBI-ProteinID:
XP_014325861
Ensembl:
ENSXMAG00000010830
LinkDB
All DBs
Position
18:complement(17319343..17344928)
Genome browser
AA seq
2062 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTAAGRLQSEQVKHKPNSPPESRRPNSKAPKAT
ASSATGQSRGHSSRRSGLNLSVASLVLQDDSQAAGTSEQERPGHQSKSEGTRGLKRSDAP
DQISVLGPTPSKKPKSVPPPKSNTSETKKGPAKSKKRQASSEAPASTGRNQSKKSAASSA
SPVQKRKKSDSFPGLSSTAGSLPNCTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSASS
SSSSSTTGTNSAATQGARLKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFDWA
TRFNPKVNLPKPKLSLPGTSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFE
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQARGLAHCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVDDSLSLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMLS
LMCSNCPSLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDAMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESESFLVTSPPKACS
SGTASLCTTTITSVSTTSANIATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQVFFAAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPS
RTAGVSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCT
ATEQLNLQVDGGLECLVEISNIVSESDVSSFEIQHSGLVKQLLIYLTSNADRDLLSRDVR
LKRFLNIFAGCPLPGVDPIGRLDPTNNSAYLALVHKMNSCLSQMEQFPVKVHDFPSGNGN
GSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRI
REEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQA
EEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEEGSKDSVGGKRGRAQTAPTKTSPRN
AKKQDELWHDGVCPSVANPLETYLATEPPETITFDDPSLEVTLLLRILHSISRFWFYLYD
NAACKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQML
FYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREDLLKQAESVMQDLG
SSRAMLEIQYENEVGTGLGPTQEFYALVSQELQRADLGLWRGEEITLANPKGNQEGTKYM
FNSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHE
TSISSHDLMNIDPSVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDL
GLDFTLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFDSFREGFESVFP
LHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAIRFLFEVLSSFDAEQ
QRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSS
IEIMREKLLIAAREGQQSFHLS
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagcagctggaaggttgcagtcagagcaggtaaaa
cataaaccaaattccccacctgaaagtagaagacctaattctaaggctcccaaagccact
gccagctcagccactggccagtccagagggcacagctcaagaagaagcggtcttaaccta
tcagtggcttcattagttctgcaagacgactcgcaggctgcgggaacatccgaacaggaa
cgaccaggccaccagtcaaagagtgagggcaccagagggcttaaacgaagtgacgctcct
gaccaaatcagcgtccttgggcccaccccttccaagaagcccaaatcggtcccaccaccc
aaaagtaatacctcagagaccaagaaaggcccagctaagtccaagaagagacaggcttct
tcagaggcacctgcatcgacaggtcgaaatcagagcaagaagagtgcggccagctcggcc
tctccagtccagaaacggaaaaaatcagactctttcccaggtctaagtagtaccgctggg
tctctacccaattgtaccgaaggcagaactgcaaaaccaaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacagactcatcctcctctgcctcctcc
tcttcttcttcctctaccacaggcaccaacagtgctgctacacagggcgctcgtttaaaa
cagggaaaagatcagacaaaagctcgtcgttccagatcagcatctagtccctctccgcgt
cgcagtacacgagacaaggagcaggccaaaactgccagctcttccaagtttgactgggca
acacgcttcaaccccaaagtaaacctgccaaaacccaaactttccttacctggaacttcc
aaaactgaaacctccaaacctgggccatctggactacaagctaaactagcaagtttgagg
aaatccacaaagaagcgcagcgagtctcctccagcagagctccccagttttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgctcgccgacaggagaaaatggctgactccgacaacaaccaa
gatggggccaattcatcagctgctcgcactgatgaggcgtcacaaggagcttcagcttca
agctcagttgccggagcagtgggcatgaccacttctggagagagtgagtctgatgattca
gaaatgggaaggcttcaagcgcttctggaagccagaggtctcccaccacatctttttgga
cccctggggccccgcatgtcgcagctgtttcacaggaccataggcagtggagccagttcc
aaggcccagcagctgctgcagggccttcaggccacaggggacgagtctcaacagctccaa
gctgccattgagatgtgccagctgctggtgatgggcaatgaggaaactcttggtggattt
cctgtcaagagtgtggtgcctgctttgattacactgttacagatggagcataattttgaa
attatgaatcacgcgtcgcgtgcgctcacttacatgatggaggcacttcctcgttcttct
gctgtcgtggttgacgctattcctgtcttcctggagaaacttcaggtgatccagttcata
gacgtagcagaacaagccctcacagccttggaaatgttgtcaaggcgacacagcaaagca
attttacaggctagaggcctggctcactgcctcctttacctggagttcttcagcatcaat
gcccagaggaatgcgttggccatagcagccaactgctgccagagcattacaccagacgag
tttcactttgttgatgattcactctcactgttgactcagagacttacacatcaggataag
aagtccgttgaaagcacttgtctctgttttgccagactagtggacaactttcaacacgaa
gagaacctgctgcagcaggtggcatcaagggacctgttgaccaacatccagcagttgcta
gttgtgacgcctcccgttctcagctcggggatgtttattatggttgtgcgcatgctctcc
ctgatgtgctccaactgcccaagtctggcagtccagcttatgaaacaaaacatagcagaa
actctgcgtttcctcttgtgcggtgcatcaaatggaagctgccaggaacaaattgagctc
gtaccgcgaagcccccaggaactctatgaactgacctccctcatttgtgaattgatgccc
tgcctccccagagagggcatatttgcagttgatgctatgctgaagaaaggcagtgctcaa
acaacagaaggtgcaatctggcagtggagggatgaccggggcttgtggcatccttacaac
cgcatcgacagccgcatcattgagacggcccaccagaacggagaagatgagatcagcttg
tcaacgctgggccgtgtatacacaattgacttcaactctatgcagcagataaatgaagac
acaggaacagcacgtggtatccagaggaagcctaatcctcttgccaatcctaacacaggg
agtcaccaagaggttcgtcgggaagatgcaagagcccagctgatgaaggaggaccctgag
ctggcgaagtgctttattaaaacactgtttggggtcttgtatgaggtctacagctcatca
gctggccctgctgtccgacacaagtgccttagagccatcctcaggatcatctacttcgct
gacgccgagctgctgaaggatgtgctgaggaaccatgctgtgtccagtcacattgcctcc
atgctgtccagccaggacctgaagattgtggttggatctctgcagatggcagagatcctc
atgcagaagctgcctgatatcttcagtgtctattttagaagagaaggtgtaatgcatcaa
gtaaagaaccttgcagagtctgagagctttcttgtcactagtcccccaaaggcctgctcc
agtggtactgccagcctctgtaccacaacaatcaccagtgtatccacgacatcggctaac
attgcaactcctgacctgggctcccccagttttcagcatagcatggacgactcgctggac
ctcagtccccaggggcggttaagtgatgtcctaaagagaaaacgccttccaaaaagagga
cccagaaggcctaagtactctccgccaagagacgatgataaagtagacaatcaggtcttc
tttgcagccaagagccccaccagtactcagtcacccaagtcgtcgttcttggccagccta
aaccccaagacctgggggaagctgggagctcaaactaacaatgccaactccgagccatca
cgcacagctggagtgagtggtctggcaagagcgcctcccaaagactctatttcaaataac
agagataaaattaaggcctggattaaagagcaggcaagtaagtttgtggagcgctacttc
aactctgagaatgtggacggcagcaaccccgctctgaatgttctccagagactttgcaca
gccaccgagcagctgaacctgcaggtggatggtgggttggagtgcctggtggaaatctcc
aacatcgtgtcagaatctgacgtgtcatcgtttgagatccagcacagcggtctggtgaag
cagcttctgatctaccttacctccaacgcggacagagacctgctcagtcgtgacgtgcgg
ctcaagaggttccttaacatcttcgctggttgtccgctgccaggcgttgatcctataggt
cgtctggatcccacaaataattcggcgtacctggcactcgtgcacaagatgaacagctgt
ctgagccaaatggagcagttcccagtcaaggtgcacgactttcccagtggcaatgggaac
ggcagcaggggatctcaggcactgaagttcttcaacacacatcagctcaagtgtcagctg
caaaggcacccagactgcactaatgttaaacagtggaaaggcggccctgttaagattgac
ccgctggccctcgtgcaagcgatcgagagatatcttgtggtcagaggttatggtagaatc
agggaagaagatgaggacagcgacgatgacggttcagatgatgaaatagatgaatcattg
gcggcacagttcctaaattctggcagcgtgcgtcacagactacagttctacattggtgac
cacctgctgccatacaacatgacggtgtaccaggcagttcgacaatacagtcttcaggca
gaagaagagcgggagtcgacagatgacgaagcaaatccactggggagagctggaatctgg
accaaaacgcacacaatatggtataagcctgtgagagaagacgaggaaggcagtaaggac
tcggtgggtggaaagcgaggcagagcccagactgctcccactaaaacctcaccgcgcaac
gccaagaaacaggatgagctgtggcatgatggcgtgtgtcccagcgtcgccaatcctttg
gaaacatacctcgctacagagccaccagagaccataacctttgacgacccctctttagag
gtcaccctgctgctgaggatccttcactccatcagtcgattctggttctatttgtatgac
aatgctgcgtgcaaggaaattattccaacctctgagttcattaatagtaaactgactgcc
aaagccaatcgtcagctacaagatccactggtcatcatgacagggaacatccccacctgg
cttatcgagctgggaaagacctgccccttcttcttccccttcgacactcggcagatgttg
ttttatgtaaccgccttcgatcgagacagagccatgcagcgcctgctggacacaaacccc
gagatcaaccaatcagattctcaggacagcagagtcgcaccacgtctggataggaaaaag
agaactataaaccgtgaggatctattaaaacaggcagagtctgtgatgcaggaccttggc
agctccagggcaatgctggagattcagtatgagaatgaggtgggcacgggtctcggtccc
acgcaggagttctacgctctggtgtctcaggagcttcagagagcggatcttggtctttgg
agaggcgaagagattactctggccaatcctaaaggaaaccaagagggcactaagtacatg
ttcaactccagaggattgtttgctgttccctttggcagaacaacaaaaccagcacacata
gccaaaattaaaatgaagttccgtttcttagggaagttgatggccaaagcaattatggac
tttagactgctggatctgccgttggggcttccgttttataagtggatgctgcgacacgag
acgtctataagctctcacgacttgatgaacattgatccaagtgtggccaagtccatccag
cacctggaggatatcattcgtcagaagaagaggttggaacaggaccgatcacagaccaga
gaaaccctccagcaggccctagagagcctgaacatgaacggctgctcggtggaggacctg
ggcttggacttcactctgcctggcttcccaaacattgaactgaaaaagggcggaaaagac
gtgccagtcacaatctacaacctcgaggagtacctcaggttggtggtgtactggacctta
aatgaaggagtatcaagacagtttgactcattcagggaagggtttgagtcagtcttccct
ttgcatcacctgcagtatttctaccctgaagagctggaccagttgctgtgtggaagtaaa
tcagagacatgggatgtgaagacgctgatggagtgctgtcgaccggaccacggctacacg
catgacagccgggccatccggttccttttcgaggtgttgagcagcttcgatgccgagcag
cagcggctctttctccagtttgttactggaagcccgaggctgcctgtcggaggtttccgg
agcctcaacccccctctgacaattgtgaggaagacattcgagtcaacggagaatcccgac
gacttcctgccctcggtcatgacctgcgtcaactacctgaagctgcctgactactccagc
atagagatcatgcgagaaaaacttttgattgctgctcgcgagggccagcagtcgttccac
ctttcctga
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integrated database retrieval system
