Xiphophorus maculatus (southern platyfish): 102217946
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Entry
102217946 CDS
T02923
Name
(RefSeq) THO complex subunit 4-like isoform X1
KO
K12881
THO complex subunit 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
xma03015
mRNA surveillance pathway
xma03040
Spliceosome
xma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102217946
09122 Translation
03013 Nucleocytoplasmic transport
102217946
03015 mRNA surveillance pathway
102217946
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102217946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102217946
03041 Spliceosome [BR:
xma03041
]
102217946
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102217946
TREX complex
102217946
Spliceosome [BR:
xma03041
]
Complex C
Other components
EJC/TREX
102217946
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102217946
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
102217946
NCBI-ProteinID:
XP_005807077
Ensembl:
ENSXMAG00000012218
LinkDB
All DBs
Position
16:complement(16579737..16584088)
Genome browser
AA seq
269 aa
AA seq
DB search
MADKMDMSLDEIIKQNRQQRGGGRGGRGRGRGGRVGLGGGRGGGPGRLGGGGGGGFGGRG
GGSGPMRNRQNLNRARGRPTPYSRPKQLPDKWQHDMFDTGFGGFNGSAGGGGGAGVETGG
KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQY
NGIPLDGRPMNIQLVTSQIDTQRRPMQGLVVVGGMNRNRTFGMQRGRGGRGSAFFRGRGR
GGRGGGSKPLSAEELDAQLDAYNARMDTS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaatggatatgtctctagatgagattatcaagcagaacaggcagcagaga
ggtggaggccggggaggaagaggccgcggccgaggcggccgtgtgggcctaggcggcggc
cgaggcggaggccctgggcgacttggaggcggcggcggtggaggatttggaggccgaggc
ggcggatccggccccatgaggaatcgacagaacctgaaccgcgctagaggcaggccgacg
ccttacagcaggcctaaacagctccccgacaagtggcagcacgacatgttcgacaccggc
ttcggaggctttaatggtagtgctggtggtggcggaggagctggtgtggaaactggaggg
aagctcctagtctccaatctggactttggtgtttcagatgcagacattcaggaacttttt
gctgaatttgggactctgaagaaggctgccgttcattacgaccgctcaggaagaagcctg
ggaacagctgatgtccattttgagaggagagcagatgcactgaaggccatgaagcagtat
aatggcatcccacttgatgggcgaccaatgaacattcaactcgtcacgtcacagattgac
acacagaggcggcctatgcaggggctggttgtagttgggggcatgaacagaaatcgcacc
tttggcatgcaaagaggtcgaggtggccgtggttcagctttcttcagagggagaggacgg
ggtggccgaggtggcggaagcaaaccgctttcagcagaggagcttgatgcacaattagac
gcctacaacgccaggatggacaccagttaa
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integrated database retrieval system
