Xiphophorus maculatus (southern platyfish): 102218035
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Entry
102218035 CDS
T02923
Symbol
thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102218035 (thsd1)
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
102218035 (thsd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_N
THSD1_D3
TSP_1
TSP1_spondin
THSD1_D2
TSP1_ADAMTS
TSP1_CFP_C
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
102218035
NCBI-ProteinID:
XP_005807154
UniProt:
A0A3B5Q5K1
LinkDB
All DBs
Position
11:28735337..28747443
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AA seq
942 aa
AA seq
DB search
MPQPVLLLPFLLVLIGYAFAGLSIWPSFHEALSNGSVFVDFSTTSNNSTIINMSLSLVNM
ETNTSILSRTLPSNQLVGREEFDCSCFLYAGTFRFLLRQTSITTVFHANRTDVSSTESSA
SWWSSELQVQWPTFHISVAKARNYSEYFQVVLSSNEHFQACSRGTDSALFLEVSYMEYNQ
IGQSTVDKVRAQTRKPIKPLRSQSVELPCAFPFTERDFLRVALRSPHTVQEVKDSVPLYL
SRIFSYKLLVENASAYKSGCMGTMTVKMISPPCTHANGKILLYNAGLARLSDLTSLLMEF
RPEEQSSSLIASNWLTQGKNETEFNCSVFYPGRNKYCFRYVFNISQSHSPAQTCLVVYRR
AESWGPWHPWSVCSATCGEAVRERVRECLLPSGVRGTQCTGMMKEQSLCSLEDCDMLSSP
SPSLPSVPVRASQLGGNMIVVLGISLCLAVIMATVVVTVWRKLCQTPQCSSVHRGSIHSP
GGRKLSDEASICGHSLQRPSLSDGHCPSGAVVPQKERPSLGVQPLSPQALKSLSQDPERL
SPTGQKVLPPIFGYRLAQQQLKEMKKQGLKEATQMYHVSSSPVHDTVVETCASPTTSPIP
SPTEFACSALPLGLQDNANHSHFCTSTPLSGTLGVTSDRLSPRVEIVLGPPPVSGRSSKW
RDRTADWVEMVERSKMPSLRGEGDEASANSFHKNPNFRRTSSFSDTKLLSTSSAQSTQFR
ERSMTQVGSRTLPEGSSWTKERWERQPHPSYPIPEHRVSDWSTTKPQSNEQRKVWMGTAH
NSQVKHTGTNTNNISTSEKNAKDFSGRGERKRLADPDGRGGELVSGIGGPSLTHPWSHEV
KQLGVDRAERAEQNWNRRGPSPIQRNILARKLKEAQSCSGAKGRQRSSSFNVSSSDRRKD
WCNSLPMSRDQSSSGGSPYRLSEVEQRMLDLDLSPNFVQEKQ
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgccacagcctgtcttgctgctgcccttccttcttgtgctcataggatatgcttttgca
gggctcagtatttggccctctttccatgaggcccttagcaatggaagtgtatttgtggac
tttagcacaacatcaaataacagcaccatcatcaacatgagcctctctctagtcaacatg
gaaaccaatacttcaattctttcccggaccctccccagcaaccaactggttggtagggag
gagtttgattgttcctgcttcctgtatgcaggaactttccggttcctgctgaggcagaca
agcatcaccactgtttttcatgctaacagaacagatgtcagcagcacagaaagctcagcc
tcctggtggagctctgaactgcaagtgcagtggcccacttttcacatttctgtggcgaaa
gcacgaaactactctgaatattttcaggttgtgttatcctctaatgaacactttcaggct
tgctccagaggcactgactctgccctcttcttagaagtgagttatatggagtacaaccag
atcggacaaagtaccgttgacaaagttcgagctcaaacacggaaaccaatcaagccgctt
cgttcgcagagcgttgagctgccctgtgctttcccattcactgagagagacttcttacga
gtggctctgcgatcccctcacacagtacaagaagtgaaggactctgttcctctctatctg
tcccgtattttttcctacaaactactggtggaaaacgccagtgcctataaaagtggctgc
atgggcacaatgactgttaagatgatatccccaccttgcactcatgccaatgggaaaata
ctgctatataatgcaggcctcgcaaggctgagtgacttaacttccctgttgatggagttt
agaccagaggaacaatcttcttctttgattgcatctaattggctcacacaagggaagaat
gagactgaattcaactgctctgttttttacccaggaagaaataagtattgcttccgctat
gttttcaacatcagtcaatcccatagtccagcacagacatgtctggtggtttacagaaga
gcagaatcttggggaccctggcacccatggagtgtttgcagtgcgacttgtggagaggca
gtgagggaaagagttcgagagtgtttgctgccctctggtgtgcgaggcacgcagtgcact
ggcatgatgaaggaacaatctctatgctccctggaagactgtgatatgctatcttctcca
tctccatctcttccctctgtacctgtgagagcatcccagcttggtggaaacatgattgtg
gtgttaggtatttccctctgcttggcagtgatcatggcaacagttgttgtgactgtgtgg
aggaagctttgccaaacccctcagtgtagctcagtccacagaggctccattcattcccct
ggtgggcgcaaactttcagatgaggcctccatctgtggccatagcctccaaaggcccagc
ctctctgatggtcattgcccatcgggggcagttgttccccaaaaagagagaccctcgctc
ggagtgcagcctctctcaccacaggcactgaaatcactttcacaggatccagaaagacta
tctcccacaggtcagaaggtgctaccaccaatatttggctatcgtttggctcagcagcag
ctgaaagagatgaagaaacaagggttaaaagaggccacacagatgtaccatgtctcttca
agccctgtccatgatactgtggtagagacctgcgcctcacccaccacctcaccaattcct
tcacctactgagtttgcttgttctgcccttcccttgggtttgcaggacaatgccaaccac
agccatttttgtacatcgactcccttatctgggacattgggggtcacatcagacagactg
agtccaagggtggagatagttttgggtcctcctcctgtctctgggaggagctctaaatgg
cgtgaccgcacagctgactgggtggagatggtagagaggagcaagatgcccagtcttagg
ggagaaggagatgaagcatcagcaaatagtttccacaagaatccaaacttcagacggacc
tccagttttagtgacaccaaactcctttcaacttcttcagctcagtccacgcagtttaga
gaaaggagcatgacccaggtgggatcgcggacgcttccagaaggaagttcttggaccaaa
gaaagatgggagagacagcctcacccgtcgtatcccatcccagaacatagagtctcagac
tggagtactaccaaaccccagagtaatgagcagaggaaggtttggatggggacagcacat
aatagtcaagtcaagcacactggaacaaacactaacaatatttcaacatctgagaaaaat
gctaaagactttagtggcagaggtgaaagaaagaggcttgccgaccctgacggcagaggt
ggagagttggtctcagggattggtggtccatcccttacacatccttggtctcatgaggtg
aaacagctgggtgtagaccgagctgagcgggctgagcagaactggaaccgccgtggccca
tcacctatccaaaggaacatcctggcccggaaactgaaagaggctcagtcctgctctgga
gccaagggacgccagcgcagttccagctttaacgtctcatcatctgatcgaaggaaagat
tggtgcaactctctgccaatgtctagagaccagagcagcagcggtggctccccctatagg
ctaagtgaggtggaacaaaggatgctggacttggatctatccccaaattttgtacaggag
aagcagtag
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