Xiphophorus maculatus (southern platyfish): 102218135
Help
Entry
102218135 CDS
T02923
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
xma04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102218135 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102218135 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102218135 (nfkb2)
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
102218135 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
102218135
NCBI-ProteinID:
XP_023183422
Ensembl:
ENSXMAG00000000193
LinkDB
All DBs
Position
22:3013575..3024141
Genome browser
AA seq
894 aa
AA seq
DB search
MAGALRMTEPQFVSYGDDNMLANFLSYDFIPPMEIKTEPYIPETAHGPYIQIIEEPKQRG
FRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVTHTDPARVHAHSLV
GRHCNENGTCSLDIGPNDLTASFSNLGILHVTKKGVVEVLTRRLRDERRRQKGTHCSLTD
GEESSILKEAKELGKVMDLNIVRLRFTAFLQDSNGGFTRALKPVVSNPIYDSKSPNASNL
KISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDEEGCWEAFGDFSPTDVHKQYAI
VFKTPPYHNAEIERPVTVFLQLRRKKAGDSSDPKQFTYVPQVQDKEEVQRKKQKPLPHYD
SWRGGRGRDGGPGASGFGSGPGGPGGSGFQFSQMNGGPGGGAFYTGAFTGFTSGGGAQMS
GSAPPASGSAPQQVEGPPGSAVQQQLLRIAASLSSQVSQSARQTAAALLQYCSTGDARIL
LALQRHLCGIQDANGDTPLHLAIIHQQTAVIQQLIQTLLSSQQHAVLNTCNHLQQTPLHL
AVITRQLKVAEVLLRAGADPTLVDKDGRSPLHLAALAGDTATLRLLLAHLGERHAHLVNT
PDYHGLQPLHLAVRRDGERCLRLLVEGGAKINAAELKSGNTPLHLAVRENLFKVACTLIT
ELKADVNACTFGGNTPLHLAASLGFPTLCSMLIAAGADKNMENDEPLYFSSSDEEAEPDE
PARGDDEQPIISRKRRARGHTPLDLATCQKVRNLLTAKRSPKPSCHADKKIRTGSEDGEL
SGLDEETLSRLVAVLSVGDVPWMKLAEKLGMMTLTHLYEDSDTPCQHLLQHYKLGGGPVE
GLVEALQALGLTEGVRLLRNTELRDDKHSSDATVDSGFSSQPMEEQQEEEMTNQ
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcgctcaggatgactgaacctcagttcgtgagctacggagacgacaacatg
ttagcaaacttcctctcctatgacttcattcctccgatggagatcaagacagagccgtac
atacctgagacagctcacggtccgtacatccagatcattgaggaacccaaacagagaggg
ttccggttccgttacgagtgcgagggcccgtcccacggcgggttgccgggggcgtccagc
gagaagaaccggcggacttacccgaccgtgaagatcaacaactacgtgggccacgcccgg
gtggaggtccagctggtgacccacaccgacccggcccgggtccacgctcacagcctggtg
ggacgccactgcaacgagaacgggacctgcagcctggacatcggacccaacgacctgacc
gcctcgttcagcaacctgggaatcctccatgtgaccaagaagggcgtggtcgaggttctg
accagacggctccgagacgagaggcggagacagaaaggaactcactgttcgctcacagac
ggcgaggagtcgtccatcttgaaggaggccaaggagctggggaaagtcatggacctgaac
atcgtccgtcttcgcttcaccgccttcctgcaggacagcaacggcggcttcaccagggcg
ctcaaacccgtggtgtccaaccccatctacgacagcaagtctcccaatgcatccaacctg
aagatctcacgcatggacaagacgtgcggatcggtgctgggaggagacgagatcttcctg
ctgtgtgacaaagtccagaaagacgacatcgagatccgtttctatgaggaagacgaggaa
ggatgctgggaggccttcggggacttctctccgaccgacgtccacaagcagtacgccatc
gtgttcaagacgccgccgtaccacaacgccgagatcgagcggccggtcaccgtcttcctg
cagctgcgccgcaagaaggccggcgacagcagcgaccccaagcagttcacctacgtcccg
caggtccaagacaaagaggaagtccagaggaagaagcagaagccgctgccgcactatgac
tcctggagaggagggcgagggcgcgacggagggcccggcgccagcggcttcggatcagga
cccggaggacccggaggatcaggtttccagttctcccagatgaacggagggccaggaggc
ggagctttctacaccggagccttcacaggcttcacctcagggggaggagcccagatgtca
ggctccgcccctccagcttcaggctccgccccccagcaggttgagggcccgccaggctcg
gctgtgcagcagcagctgcttcggatcgccgcctccctcagcagccaggtgtcacagagc
gcccggcagacggccgccgccctactgcagtactgcagcaccggagacgcccgcatcctg
ctggcgctgcagagacacctgtgtggcatccaggatgccaacggagacacgccgctgcac
ctggccatcatccaccagcaaacggccgtcatccagcagctgatccagacgctgctgagc
agccagcagcacgccgtgctcaacacctgcaaccacctgcagcagacgccgctccacctg
gcagtcatcacgcggcagctgaaggtagcggaggtgctgctgcgggcgggggccgacccc
accctggtggacaaagatggccgcagcccgcttcacctggctgcgctggccggagacacg
gccacgctgcgcctcctgctggcccacctgggagagcgccacgcacacctggtgaacacg
ccggactaccacggtctgcagccgcttcacctggccgtcaggagggacggcgagcgctgc
ctccgcctgctggtagagggcggagccaagatcaacgccgccgagctgaagagcgggaac
acgccgctgcacctggccgtcagagagaacctgttcaaagtggcctgcacgctcatcact
gagctgaaggccgacgtcaacgcctgcaccttcggaggaaacacgccgctgcacctggcg
gccagcctgggcttccccacgctctgctccatgctgatcgctgcaggtgccgataagaat
atggagaacgacgagccgctgtacttcagctcgtcagacgaggaggcggagccggacgaa
ccagccagaggagacgacgagcagccaatcatcagccggaagaggcgggccagaggccac
acccccctggacctggccacctgtcagaaggtgaggaacctgctgaccgccaagcggagc
ccgaagcccagttgccacgccgacaaaaagatccggaccggcagcgaagacggcgagctg
tcgggattggacgaggagacactgagccggctggtggcggtgctgagcgtcggcgacgtt
ccctggatgaagctggccgagaagctgggcatgatgacgctgacgcacctgtacgaggac
agcgacacgccctgccagcacctgctgcagcactacaagctgggtggaggtccggttgaa
ggcctggtggaggcactgcaggctctgggtctgacggagggagtccggctgctgaggaac
acagagctgcgagacgacaagcacagctcagacgccacagtggacagcggcttcagcagc
cagccaatggaggagcagcaggaggaggagatgaccaatcaatga
DBGET
integrated database retrieval system
