Xiphophorus maculatus (southern platyfish): 102218136
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Entry
102218136 CDS
T02923
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03440
Homologous recombination
xma04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102218136 (brcc3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102218136 (brcc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xma01002
]
102218136 (brcc3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102218136 (brcc3)
03036 Chromosome and associated proteins [BR:
xma03036
]
102218136 (brcc3)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102218136 (brcc3)
Peptidases and inhibitors [BR:
xma01002
]
Metallo peptidases
Family M67
102218136 (brcc3)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102218136 (brcc3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
102218136 (brcc3)
BRISC complex
102218136 (brcc3)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
102218136 (brcc3)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
102218136 (brcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
Motif
Other DBs
NCBI-GeneID:
102218136
NCBI-ProteinID:
XP_005813263
Ensembl:
ENSXMAG00000020047
LinkDB
All DBs
Position
8:2719263..2720429
Genome browser
AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVEASRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLADSTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMLDQCFV
GLIFSCFIEDKNTRTGRVLYTCFQSAQAQKGSEYERVEIPVHVVPREAIGKACLESAVEL
PRILCQEEQDTYRRIHGLSHLDPVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLQQNR
QSIAELQREKERLQRELGAL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcagcgcggttcacctggagtctgacgccttcctggtgtgcatgaaccacgcg
ctgagcaccgagaaggaggaggtgatgggtttatgcatcggggaggtggaggcgtcccgg
atcgtccacatccactcggtgatcatcctccgccgctccgacaagcggaaggaccgggtg
gagatttccccggagcagctgtccgccgcctccaccgaggcggagcggctggcggactcc
accggcagaccgatgcgggtggtgggctggtaccactcccacccgcacatcacggtgtgg
ccgtcccacgtcgacgtgcggacccaggcgatgtaccagatgctggaccagtgcttcgtg
gggctcatcttctcctgcttcatcgaggacaagaacaccaggacgggccgcgtcctctac
acctgcttccagtccgcgcaggcgcagaagggctccgagtacgagcgagtggagattccc
gtgcacgtggtgccgcgcgaggcgatcgggaaggcgtgcctggagtccgccgtggagctg
ccgcggatcctgtgccaggaggagcaggacacgtaccgccggatccacgggctgtcccac
ctggacccggtcaccaagatccacaacggctcggtgttcaccaagaacctgtgcagccag
atgtccgccgtcagcgggccgctgctgcagtggctggaggaccggctccagcagaaccgc
cagagcatcgcggagctccagcgggagaaggagcggctgcagcgggagctgggtgcgctg
tga
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integrated database retrieval system
