Xiphophorus maculatus (southern platyfish): 102218146
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Entry
102218146 CDS
T02923
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
102218146 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102218146 (vti1a)
Membrane trafficking [BR:
xma04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
102218146 (vti1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Mer2
Laminin_II
CAP59_mtransfer
DUF1664
GTP-bdg_N
YycI
Motif
Other DBs
NCBI-GeneID:
102218146
NCBI-ProteinID:
XP_005794625
UniProt:
A0A3B5PTX5
LinkDB
All DBs
Position
10:complement(7606777..7740068)
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AA seq
224 aa
AA seq
DB search
MSSDFETYEQDFGTITAEVTNKIGKIPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRAMYNSRLKSYKQEVEKLEKDFKRSRIAFSDEVRNELLGDDAISSESQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQVGQEILANLHTDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRILVFVLGGIILLTIILAIYLNLRSH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactttgagacctacgagcaggattttgggactatcaccgcagaagtaacg
aacaaaattggcaaaattcctaaactaagtggagaggagaagacacagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagttgcttgagcagatggacctggaggtgcgg
gagatccccatccagagccgcgccatgtacaacagcagactgaagagctacaagcaggag
gtggagaagctcgagaaagacttcaaaaggtcacgtattgccttcagtgatgaggtgcgc
aacgagctcctgggggatgacgccatctcctcggagagccagttgataaagttacgtgaa
gagagagcgcatctgttggacaacacagaaaggctggaaaggtcatctcggagactggag
gccggctatcagattgcagtggaaactgaacaagtggggcaggagattcttgccaacctt
cacactgatcgtgagaagattcagagagccagagaaaggttgagagaaacggacgccaac
ctggggaagagttctcgcatcctgaccggcatgctgagaaggatcatccagaatcgcatc
ctggtcttcgtcctcggaggcatcatccttctcaccatcatcttggccatctatttaaat
ctgcgaagtcactga
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