Xiphophorus maculatus (southern platyfish): 102218310
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Entry
102218310 CDS
T02923
Name
(RefSeq) tropomyosin beta chain
KO
K10374
tropomyosin 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04260
Cardiac muscle contraction
xma04261
Adrenergic signaling in cardiomyocytes
xma04814
Motor proteins
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102218310
04820 Cytoskeleton in muscle cells
102218310
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
102218310
04261 Adrenergic signaling in cardiomyocytes
102218310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102218310
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
102218310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
ATG16
Laminin_I
XhlA
TMF_DNA_bd
Crescentin
ERM_helical
CENP-F_leu_zip
SlyX
Nuf2_DHR10-like
DUF1664
DUF745
Exonuc_VII_L
GAS
FPP
HrpB7
DUF16
DUF5917
MscS_porin
Fib_alpha
Fez1
COG2
Suppressor_APC
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
102218310
NCBI-ProteinID:
XP_005810041
Ensembl:
ENSXMAG00000007560
UniProt:
M3ZZE4
LinkDB
All DBs
Position
8:27372714..27393999
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AA seq
284 aa
AA seq
DB search
MEAIKKKMQMLKLDKENAIDRAEQAEVDKKGAEDKCKQLEEELLGLQKKLKGVEDELDKY
SESLKDAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGDLERSE
ERAEVAEAKSADLEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTEKLKEAETRAE
FAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaaaatgcagatgctgaagctggataaggagaatgcgatagac
cgggcagaacaagcagaggttgacaagaagggagccgaggacaaatgcaaacagctggag
gaggagctgctgggcctgcagaagaaactcaaaggagtagaagatgagctggacaaatac
tctgagtctctgaaggatgcccaggagaagctggagcaagcagagaaaaaggcaacggat
gcggaggcagaggtggcgtctctcaatagacgcatccagctggtggaagaggagttggac
cgagctcaggagaggctagctactgctctgcagaagctggaggaggcagagaaagctgca
gatgaaagcgagagaggaatgaaggtgatagagaacagagcaacaaaagatgaagagaaa
atggaaatccaggagatgcagctgaaggaggccaaacacattgctgaggaggcggaccgt
aaatatgaagaggttgcacgtaaactggtgattctggagggagatctggaacgctcagag
gagcgtgctgaggtggctgaggctaaatcagctgaccttgaggaagaattgaaaaatgtc
accaacaacttgaagtccctggaagcccaggctgagaagtactcacaaaaagaggacaaa
tatgaagaagagattaaagtgcttacagagaagctgaaggaggctgaaacccgagcagag
tttgcagaaaggtctgtggctaagctggagaagacgattgatgatctagaagatgaagtg
tatgctcagaagctgaagggcaaggctctcagtgaggagctggacctggccctcaatgac
atgactacactgtag
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