Xiphophorus maculatus (southern platyfish): 102218346
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Entry
102218346 CDS
T02923
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xma01002
]
102218346 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102218346 (usp38)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102218346 (usp38)
Peptidases and inhibitors [BR:
xma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102218346 (usp38)
Ubiquitin system [BR:
xma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102218346 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
102218346
NCBI-ProteinID:
XP_005797644
Ensembl:
ENSXMAG00000009721
UniProt:
M4A5K3
LinkDB
All DBs
Position
5:complement(3850629..3862023)
Genome browser
AA seq
1030 aa
AA seq
DB search
MDKILEGLISSDHSVPVKRAIVKKVVEAAENDVTQEQCRALFTLTTRLILLGDDAFQKQI
GLQVLEAYARYHRPEFELFFCKDFVLCLLQQGYGQLEHRDAAIIDYIHCCLRLLISCPSV
LETFSVIQVEVLRMVCERPEPALCARLSTLLSDFMQCIPREKSGVLFCQQLVRTISCFQC
FASEERELREYVGQVTKVSTLLQNIWKAEPATLLPSLQEVFAIISSTDPSFDPSIALASL
VQHIPVQMINVLIKSLTTDQNVRDASMTKALSRMIDWLSWPLAQHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFSRLWYPIVRQGALSVLSHMLLSFQHSPEAFHLVVPHVRSLVQ
TLNTDGLPTSQTFLLQFTELIHCMMYQYSGFPDLYDHILEAIKDFPKPSEEKIKLVLNQS
AWTSQSNSFASGLLRPAGKSETGRTGLINLGNTCYMNSIIQTLFMATDFRRHVLSLHLNG
SNTVMKRLQLLFAFLAHTQRAAYAPRNFLEVSRPPWFNVGSQQDCSEYLRFLLERLHEEE
KTLHVLQSAKPTVASLVDPISRDPISPTTSEDCKDCHLVEAENRCANDGRTLIERMFGGK
LITGIRCMQCNSISEKEEPFTDLSLAFCPSSSSQGSPKSERPTEEGKVLCQGSVNGGSEA
PESSNLATNVQYEPVTNEPPLSVPDLVNYFLAPEILDEDNAYFCEKCVSLQRAERTMKVV
SAPEYLILTLLRFSYDAKSHIRKKILDNVIIPPALRLPVHASATPVQWSSASSSPLQVDS
PESSENLAKKLKPSQGEEEEERKLRLDEAEKMTRGRETSVQSVPYMLSSVVVHSGVSSES
GHYYSYGRNINGADGTQHPAGFSSVKQDLASDQAACSLCKSEQGDSLPNVGLEARDWLLF
NDSRVTYTSLQSVQNITNRFPKDTAYVLMYRKQELPALNGNEGQMANGMRLSAEPPLQKE
LLDAIIKDNKLYLQEQELSARTQALQASSSSCSFRPNGSDDNNPPGSCGPSGGGGGGGGG
GFNTISRLVF
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattctggagggcctgatcagctccgatcactctgtcccggtgaagagggcc
atagtgaagaaggtggttgaagcagcagagaacgacgtgacgcaggaacagtgtcgagcc
ctattcacactcaccacccgcctcatcttgctcggtgacgatgctttccagaagcagatt
ggcctgcaagttctggaggcctatgctcgctaccaccggcccgagtttgagctcttcttc
tgcaaagactttgtgctctgtttactccagcagggctacgggcagctggaacacagagat
gctgcaataatcgattacatccactgctgcctgcggctgctcatcagctgcccctccgtc
ctggagaccttcagtgtcatccaagtggaggttttgaggatggtgtgcgaacggcctgag
ccagctctctgcgcccgactcagcactttgctgtcagactttatgcagtgcatcccgagg
gaaaagtcaggtgtcttgttctgccagcagctagtgaggaccatcagctgctttcagtgc
tttgccagtgaagagcgggaactgagagagtatgtaggccaggtgacaaaggtcagcact
cttctacagaacatctggaaggcagagccagccacactgttgccttcactgcaagaagtc
tttgctattatctcctccacagacccatcctttgacccatctattgccctggctagtctg
gtccagcacatccctgtccagatgatcaatgtgctcatcaagagtctcaccacagaccag
aacgtcagagatgcaagcatgaccaaagctctcagccgaatgatcgactggttgtcttgg
ccgctggcccaacatgtggatacctgggtcatcgcactactgaaaggactggctgctgtt
cagaagtttaccattcttatagatgtcactctgctgaaaattgaactggtattcagccgt
ctgtggtaccctattgtgcggcagggggcgctatccgtgctttcccacatgctgttgagc
ttccagcactctcctgaggccttccatttggttgttccacacgtgcgctctctagttcag
actctaaacacagacggtctccccaccagtcaaactttcctgctccaattcactgagctt
atacactgcatgatgtaccagtactctggcttccctgacctctacgaccacatattggaa
gccataaaggatttcccaaaaccttcagaagaaaagatcaagttggtgttgaatcaaagt
gcctggacatcccagtccaattcgtttgcttctggtttattgaggccggctgggaagtct
gagacaggaaggacaggtctgatcaacctggggaacacctgctacatgaacagcatcatc
cagaccctttttatggcaacagatttcaggaggcacgttttgtctttacatctaaatggc
tccaacacagtaatgaagagactccagctcctttttgctttcctggcacacacacagagg
gcagcgtacgctcccaggaacttcttggaagtgtctcgtcctccctggttcaacgtgggc
tcacagcaggactgttcagagtatctcagattccttctagaaaggttgcacgaagaggag
aaaacgcttcacgttctgcaatcagccaagccaacagtagcctccctggttgatcccatt
agcagagacccaataagcccaacaacttctgaagactgcaaggattgccatttggttgaa
gcagagaaccgatgtgcaaatgatggaaggactttgatagagcggatgtttggtggaaag
ctgatcacaggcattcggtgcatgcagtgtaacagcatctccgagaaagaagagcctttt
acagacttgtctttggccttttgtccgtcttcttcctctcagggcagtcccaaatcagag
agacctacagaggaaggcaaggtgctctgtcagggatctgtcaatggtggcagcgaagct
cctgaatcaagcaatctagctactaatgttcagtatgagccagtgacgaacgaaccccct
ctgtctgtgcctgacctggtgaactattttctggctcctgaaatcctggacgaagacaac
gcgtacttttgcgagaagtgtgtttccctccaacgagctgagaggaccatgaaggtggtt
tccgcgcctgaatacctcatcctcacgttgctccgattctcttacgatgccaaaagccac
atccgcaagaagatcctagataacgtcatcatcccgccagctctgagacttcctgtccat
gcctctgcgacgccagtgcagtggtcctccgcctcttcgtctcctttgcaagttgattct
ccggaaagcagcgagaacctggctaagaaacttaaaccatcacaaggagaagaggaggaa
gagaggaagttaaggttagatgaagctgagaagatgacaagaggaagagagacttcagtc
caatcagtgccctatatgctcagctctgttgtggtgcattctggggtttcctcggagagt
ggccactactactcctacggacgaaacatcaacggagcggatgggacgcagcatccagcg
ggtttctcttctgtcaaacaggatttagcgagtgaccaggccgcttgtagcctctgcaaa
tcagaacaaggcgactcattacccaacgtgggcctggaggcgagggactggctcctgttc
aatgacagcagagtgacatacacttccctacagtcagtacaaaacatcaccaatcgcttc
cccaaagacacagcctatgtgctcatgtacaggaaacaggagctgccagcgttgaatgga
aatgagggacaaatggcaaatggaatgagactgagtgccgagcctcccctgcagaaagag
ctgctggatgctatcatcaaagacaataagctgtatttgcaggagcaggaactcagcgct
cggacccaggctcttcaggcgtcttcgtcttcctgctcattcaggccaaacggttcagat
gacaacaacccaccagggagctgtggcccatctggaggaggaggaggaggaggaggagga
ggattcaacaccattagcagactggtcttctaa
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integrated database retrieval system
