Xiphophorus maculatus (southern platyfish): 102218453
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Entry
102218453 CDS
T02923
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102218453
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xma01009
]
102218453
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102218453
Protein phosphatases and associated proteins [BR:
xma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102218453
Cell adhesion molecules [BR:
xma04515
]
Cadherins
Protocadherins
102218453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Syndecan
Motif
Other DBs
NCBI-GeneID:
102218453
NCBI-ProteinID:
XP_005803668
Ensembl:
ENSXMAG00000000419
UniProt:
M3ZDW9
LinkDB
All DBs
Position
11:complement(23063404..23189238)
Genome browser
AA seq
1190 aa
AA seq
DB search
MELNLRVVLFWVVVLHGGSVDGSILYRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRSLAKGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFPSSVLAISVPENTIMGALFSIPLATDRDSERNGVADYALTAGPDAATL
FGLQVAEDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVTDANDN
APKFEKTSYDAEVLENSPVGHSVLQVKANDSDMGPNGEIEYTIHQAVDPVPRLLRIDRST
GIIYVKGPLDREEISSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVT
HSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSPTDNKRKY
FLQTTTPLDFERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVDFA
EENQPGERILDVTATDADSGTNAQLLYDIVADSAIKGLFEIDPNSGEVRARSPLDREHKE
RYEFRVTAADKGSPVHKGTATVVVKVLDRNDNEPKFMLSGYSFSVLENMPPLSPVGMVTV
QDMDKGENALVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPKS
SYVGVTINVLDENDNDPVITKPSNSSFRRLSPLASPDSHVEVVEAEDLDSGPNAELVFNI
AGGNPYQLFRISPTTGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVNETI
SNVSLVEALVGHSLYTPLDRDIAGDPDSGFAAHRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQAPKNTKGKRGRKGKPQKSPKPLGEDEEVSLQKSLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA
NTFVGTGGDDNSTGSDQYSDYSYKTSQPKYNNKQHPHRRVTFSTANPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGN
CTTECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSARLGGEEHR
PRLPPSRSAYSSSGQDPGQDCPVEEMPLSVASEFPPTSPSAHTPKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaatttacgagtagtactgttttgggtcgtggtgctgcacggtggctccgtc
gatggcagtatcctctaccgagtccaggaggagcagccccccaacactctcataggcagt
ctggcagcggaccaggggctgccagactcaggtcacctctacaagcttgaggtgggcgcc
ccttatctccgagttgatgggaagacaggagacattttcactacagagattccaatagac
agagagaccctccgggactgtcgatccctggccaagggcaagccgtgctacttggaattt
gaagtatcggtaacagacctgatacaaaaccagagcccacgacttattgaaggacgtatt
gaagtacaggacatcaatgacaacaccccacaatttccctcttctgtgctcgccatctcg
gtacctgagaacacaatcatgggggcattattctccatacctctagccactgacagggac
tctgagaggaatggagtggctgactatgcgctgactgcgggcccagatgcagcaactcta
tttggtttacaagtggcggaggacaggggagggaaactcccacagctcatcgtcctcggc
aatttggaccgcgagttaaaggattcttatgacctcacaataaaggcggtggatggaggg
aaccctcagcgctacagcagtgctctgctcagagtggttgttaccgacgccaacgataac
gcccctaagtttgaaaagacttcatatgatgcagaagttttagaaaacagtccagtcggg
cactcagtgttacaggtcaaagcaaatgactctgacatgggccctaatggagaaattgaa
tacaccattcaccaagcagtggacccagtaccaagactcttacgaattgatcggtctact
ggcattatctatgtgaagggaccactggacagggaggaaatcagcagcttgtctttctat
gtggtggcaagggataagggtcctcaacctaagagctctaagacatttgtaacgattgaa
gtgactgatcaaaatgacaatgctcctgctgtggagattcgtggaattggtctggtgact
cacagtgacggagtggccaatatttcggaggacatgccagtggggacagctgttgcttta
gtacaagtatctgacaaagatgaaggagagaacgctgtcgtcacatgcgtggtagcggga
gatgtgccctttcagcttcgtcctgccagtgactctcccactgacaacaaaagaaaatat
tttcttcagacaaccacacctcttgactttgaaagagtcagggactacagagtagaaatt
gttgcagtggactctggaaacccagcactgtctagtacaaactccctaaaagttcaggtg
actgatgtgaacgacaactctccaatattttccccaacactgtttgaagttgactttgct
gaagaaaaccaacctggggagaggattttggatgtcactgctacagatgctgacagtggc
actaatgcccaactcctgtacgatattgttgcagattcagccatcaaaggtttgtttgag
attgacccaaactcaggtgaagtaagagctcgaagcccgctggatcgtgaacataaagag
cggtatgagtttcgggtcacagctgcagacaaaggttcacctgtccataaaggaacagca
acagttgtggtaaaagttcttgaccgcaatgacaatgaaccaaagttcatgcttagtggg
tacagcttttcagtactggaaaacatgcctcccctaagtcctgtgggtatggtaacagtt
caagatatggacaaaggtgagaatgccctagttcacctctccgtagaaccagatggaggg
aagtttgtagttcagaatggaacaggtacaattctctcaagcatctcttttgacagagaa
aaagaaagcagctatactttccgtctaaaggcagtggatgggggagaaccacccaagtcc
tcctatgttggtgtcactatcaatgtactcgatgaaaatgacaatgaccctgtcatcacc
aaaccctccaactcttcattcaggcgcttatcacctctcgcatctccagacagccatgtt
gaggtggtggaggctgaagacctggacagtggacccaatgcagagttagtcttcaatatt
gctggaggaaatccttaccaattgttccgcatctcccccactactggagagattactctg
gcaaaggagatgacccgcaaacatggggggctgcatcgtttagtagtacgggtgagtgac
aggggaaagcctccacgtcatgcaactgccctggttcacatctatgtcaatgaaacaatt
tcaaatgtcagcttagtggaagccttagtgggacacagtctttacactccactagacagg
gacattgccggtgatcctgacagtggtttcgctgcccatcgcagtaacattttgtttgga
agccttgccggtgtggcgggagttgttatgttgatcttggtggtggtgtttattcgccac
cgcatccagagagaaacaaagagtggctatcaagcaggtaaaaaagaaacaaaagaccta
tatgctcccaagcaagcaccaaaaaacaccaaaggcaaacgagggcgaaaaggcaagcca
caaaagtccccaaagccacttggggaagatgaggaggtcagcctgcaaaagagtctaaag
tttaatcttgatggagtaaacgacagtccccgcatacacctgcccttaacatattccccg
ggaagccccgacatcggtaggcattaccgatccaactctcccttaccttctatccaactg
caagcccaatccccttcagcttctcagaagcaccaggccgtgcaagacctccctgcagcc
aacaccttcgttggaacgggaggagatgacaactctaccggctcagaccagtactcagat
tacagctacaagaccagccaacccaagtataacaacaaacagcatccccatcgtcgcgtg
accttttccaccgccaaccccgtgcaggacctgcaggacgcctcgcagcacagctactat
gacagcggcttagaggagtcggagacccccagcagcaagtcctcatctggtcctcgcatc
ggacccctgaccctgcccgaggaccactacgagaggaccaccccagatggcagcattgga
gaaacagaacacccagaaaacgacatccgctccctccctgacgtggcgatgaccggaaac
tgcacaaccgaatgcagtgaattgggtcactcggatgcctgctggatgccggggcatccc
tcccccgtgcggaagaccaggaacccccccaagctctccacatttgtgccttaccaggag
agagggagtctgggtcgcctggccaacggcagcgccaggctgggtggagaggagcaccgg
ccgcgccttccgccctcccgcagtgcctattccagcagcggccaggaccccggtcaggac
tgtcccgtagaggagatgcccctgagtgtggcctctgagttcccgcccacgtccccttct
gctcatacccccaaacgagagatttacctgtga
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