Xiphophorus maculatus (southern platyfish): 102218500
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Entry
102218500 CDS
T02923
Name
(RefSeq) sorting nexin-27-like isoform X2
KO
K17936
sorting nexin-27
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102218500
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102218500
Membrane trafficking [BR:
xma04131
]
Protein recycling
Others
Others
102218500
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
102218500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
PDZ_2
SNX17_FERM_C
USP7_C2
SNX17-31_F2_FERM
FERM_N
DarA_N
RA_3
Dickkopf_N
GEVED
Motif
Other DBs
NCBI-GeneID:
102218500
NCBI-ProteinID:
XP_005814387
Ensembl:
ENSXMAG00000010582
UniProt:
M4A819
LinkDB
All DBs
Position
3:17990166..18002373
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AA seq
568 aa
AA seq
DB search
MADVKGQGVCSSVPPLPRPSSRNGSGSGSVTPDTGGSWQTPTTVTSGPRLVRIVKSDSGY
GFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGAT
HKQVVDLIRAGEKELVLAVLSVPPQEADCLDPGDDVSALSCYDYSDKQAVPISIPSYKHT
ELNSEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFANFTFPKLPGKWPFSLSEQQLD
ARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDNTTLTVRVRK
NSTTDQVYQAVVMKLGIDSITASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAIPGT
CLTLRKWLFTTEEEILLSDNQLAVSYFFHQAADDVKKGFIKVEQKSYQLQKLAEQKKMSM
YLSLLRSCEGYNEIVFPHCSCDSRRKGHVITAISIHNFKLHACTEEGTLESQVIAFEWGE
MQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATD
KDNKNCSKDGMCGKNIFQLLRHRRDGGT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtaaagggacaaggagtttgctcctcggtccctccgttgcctcgcccttcc
tcccgtaacggctccggtagcggcagcgttacgccagacaccggcggcagctggcagacg
ccaaccaccgttacttcaggccccaggctggtgcggatagtgaagtctgactcgggctac
ggcttcaacgttcgggggcaagtaagcgaaggcgggcagctgcggagcattaacggggag
ctgtacgctcctctgcagcatgtgagtgctgtcctccccgggggagctgcagacagagcc
ggtatctcaaagggggataggatcctggaagtcaatggtgtaaatgtagagggagccaca
cacaagcaggtggtggacctgatccgggctggcgagaaggagctggtgctggcagttctg
tccgtcccaccgcaggaagccgactgcctggatcctggtgacgacgtgtcggccctgtcc
tgttatgactactctgacaagcaggccgtcccgatctccattccgagctacaaacacact
gaactcaatagtgaaaagtttgtggtatataatgtgtacatggctggtaggcagctgtgc
tccaagcgttatcgggagtttgtgattttacaccaaaaccttaagagggaatttgccaac
tttacgttccccaaacttcctgggaagtggcctttttcactctctgagcagcagctagat
gcacggcgccgaggcctggaggaatacctcgaaaaagtctgttcagtacgggtaattgga
gaaagcgacatcatgcaggagttcttgtctgaatcagacgagaactataacggtgtttca
gacgtggagttgagaatagccatgccagataatactaccctcactgttagagttcgtaaa
aactctactacagaccaggtttatcaggccgtggtcatgaagcttggcatagacagtata
actgctagctactttgctctgtttgaggtcatcaaccataccttcgtgcgtaaactggcc
cccaacgagttcccccacaaactttatgtacagaactatacctcagccatcccaggaacc
tgcctcactctgcgaaagtggctcttcaccacagaagaagagatcttgctcagtgacaac
caacttgctgtcagctacttctttcaccaggcagctgatgatgtgaagaaaggcttcatt
aaagttgagcagaagtcttatcagctccaaaaactggcagagcagaagaagatgtccatg
tacttgagtttgttacggagctgtgagggctacaatgagatcgtattccctcattgttcc
tgtgactcccgacgtaaaggccatgtgatcacagccatcagtatacataactttaagcta
cacgcctgtacagaagaaggtactctggagagccaggtgattgctttcgaatggggggag
atgcagagatgggacacagacgaagagggcatggctttctgttttgaatatgcacgggga
gagaagaagccgcgctgggtgaagatttttactccttattttaactacatgcatgagtgc
ttcgagagagtcttctgtgagctgaagtggaggaaagaggtggaagaggaggccacagac
aaggacaacaagaactgcagtaaagatggtatgtgtggaaagaatattttccaactgttg
aggcacagaagagatgggggcacgtag
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