Xiphophorus maculatus (southern platyfish): 102218536
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Entry
102218536 CDS
T02923
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102218536 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102218536 (gtf2b)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
102218536 (gtf2b)
Prokaryotic type
Archaeal type
TFB
102218536 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
BRF2-like_C_cyclin_rpt
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
102218536
NCBI-ProteinID:
XP_005802414
Ensembl:
ENSXMAG00000004206
UniProt:
A0A3B5QCM1
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All DBs
Position
6:2969368..2982399
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AA seq
318 aa
AA seq
DB search
MASTSRGESLALPKVQCPNHPDALLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMISRGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacgagtcgtggagaatctctggccttacccaaagttcagtgtcccaaccat
cctgatgctttactggtggaggactacagggcaggcgacatgatttgtcctgaatgtggc
cttgttgttggtgaccgtgtgattgacgtgggctctgagtggaggacgttttctaatgag
aaggctctcaaagatccatccagagtgggagacgctcagaaccccctgctcaacggagga
gacctgaccaccatgatcagcaggggaacaggcgcggccagcttcgatgagttcggcaac
tcaaagtaccagaaccggcggaccatgagcagctctgaccgggccatgctgaacgccttc
aaagagatcagcaccatggcggatcgcatcaacctgccgagaaacatcgtagacagaaca
aacaacctgttcaagcaggtttatgagcagaagagtctgaagggtcgagccaacgatgcc
atcgcctcagcctgcctctacatcgcctgcagacaagagggcgtaccaaggacatttaaa
gagatctgcgccgtctccaggatctcaaagaaggagatcggcaggtgcttcaagctgatc
ctgaaggctctggagaccagcgtggacctcatcaccacgggagatttcatgtcccgcttc
tgctccaacctgggcctgccgaagcaggttcaaatggccgccaccttcatcgccaggaaa
gccgtggagctggacttggtgcccggcaggagccccatctcggtggccgctgcagccatc
tacatggcctcccaggcctccgctgagaagaaaacccagaaagaaatcggcgatatcgct
ggcgttgccgacgtcaccatcagacagtcctaccgactcatctatccacgcgcagcagaa
cttttccctccagactttaagtttgacacgcctgttgataaactgcctcaactgtga
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integrated database retrieval system
