Xiphophorus maculatus (southern platyfish): 102218559
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Entry
102218559 CDS
T02923
Name
(RefSeq) E3 SUMO-protein ligase RanBP2
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
xma03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102218559
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102218559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102218559
03110 Chaperones and folding catalysts [BR:
xma03110
]
102218559
04121 Ubiquitin system [BR:
xma04121
]
102218559
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102218559
Chaperones and folding catalysts [BR:
xma03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
102218559
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
102218559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
TPR_1
TPR_2
TPR_16
TPR_CcmH_CycH
TPR_14
TPR_8
ARM_TT21_C
TPR_7
DUF1681
PPR_1
Motif
Other DBs
NCBI-GeneID:
102218559
NCBI-ProteinID:
XP_023192278
Ensembl:
ENSXMAG00000003519
LinkDB
All DBs
Position
7:22054527..22088176
Genome browser
AA seq
3027 aa
AA seq
DB search
MRRSKAEVDRYVSSVQSSSPSLKEKPVKGFLFAKLYFEAKEYELAKRHVSEYLKVQERDP
KAHKFLGQLYEREGEINKAIGCYKRSVDLNPVQRDLVLKVAELFVGKGDCNSRAEFWVEK
AAKLLPGNPEVFNLKERLLSRQGQQGWNQLFDLLQAELAARPADSLVNVKLVQLFCQDGR
LDEAVKHCLATEKKGFLRNSLDWYNVQRNTLQEYLAQPSVLNNEKMCRRLQREVLLAHCS
LLRIRLSESGVQPSLEAFRSFDQAMQALSVVAARFADELFEVFVEMRAHLYLHAATLLLK
MAQDQQHAWRAVIDLAALCYLLAYQAPRPKTNVTKRDQSAPQLLELLASDRQSQAGHMLL
NLSADASTLIREVVEAFGNRIGQESLFELLWGPQASSASSFIANDDIHSLSSLGPELSKL
AKWDSGSILLHGGDLQHLSWLGLQWTLLDQRPPMRDWLQQLFPRLTLETSKLDTNAPESI
CLLDLEVFLCGVVFCSHCQLQDTAKISRSLSPRQQQLFEPRCLPLPLLRLLATQRQREWW
DAVYSLIHKRALPGTSAKLRMVVQHGLNTLRAGEKHGLQPALIIHWAQILSQTGDGINSY
YDQKEYVGRSVHYWQVVTLLLEKIKSRRSIPEPLDPLFIHFASKDIQISAVKGYEDEAKI
AFAVLLDIEGRTEEAIATLESINNMSSIWHLAQIYQRLAEEASNGVEETQDRCLTFLRKF
RNYLSKIYNANADDIERLPVSMEEVVDLLNDVNQQLGETQEDMEEEEEQEINLRRGPTHS
SPARLTETSATISHIKFASPSPSKSIVSPSKRLISPKTPPHWIEDQKSLLQMLCQQVEAL
KNEVHDLKHNASGNSGSPHHKMYGDTYRAESLQEPFTPVQSYHGAPLTVATTGPPVYYNQ
SPAYSSQYLLRTAANVTPTKGPVYGVNRMPPQQHMYAYQPPTHTPPLQTAPSCIYPPQEQ
VFGSPLRFESQATGLLSPYSEEYYGQSVTQQTNPTLPEPGYFTKPSVAPVQPPKAVEGKP
VDFGKLSFSQQAATEVPRVPNFGAGSVGPATTSPAFKFNCFPKSSERDLNFCSPQTKQSE
SLLGLLTSDLPPKPDSFPEKPPAQEQPPGHQSIFTFGNKNISSFSFVDSTPNASAGGLFG
KPEQPFKLGEVTAFGIGKTSELEKAAESDESTHVEEDEDGPHFEPIVPLPDKVDVKTGEE
EEEEMFCNRAKLYRFDTETKEWKERGIGNIKILKHNTKGKVRLLMRREQVLKICANHYIT
ADMLLRPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTVDEAALFKAKFEEAQKVTSKSP
EKQKQQEKKEETSKDLGLLASRFALKEGEWECAVCDVRNKATAVQCAACNTPNPQSSSKP
ELQVTTEAKTSPFNFKFGTDTSKPSGSTPTFTGFGAFGTSVPSSFTFGMSSSKPTDKPAG
PFGFSFGSQFPTKPEQWDCGKCSAKNEASTDSCASCKTPKTTVKTAEIAQIAPAPEAPAT
QSSVSAVDAGFAARFSKKPGQWDCDVCEVRNEASADKCVSCQTPNPASKSSTVAPAAPAA
PAGSGFAANFAMKDEQWDCNVCLVRNEGSAAQCVSCQSPNPNPSLEAMFGKKEGEWDCDA
CLVRNKASSNECVACKTSNPNAKSTITSAASASSFSFNIGTTSSSNQAAGSAFTFGSSGA
FQFGQNKDKASASAFKFEAPQAAPATTTSSGFSFSMPIPAGGFKFGVQDSATGLASSNNQ
TSTGSASSILKNMADKHKEKENVSTPSIDQTEKDQNPLIAGKADTFSFADLAKSSEGTFQ
FGQKDPNFKGFSGAGAQVFATPQTTPTKAEASNELEDDGMYKTEEHDDIQFEPVVQMPDK
VDLVTGEEDEQVLYSQRVKLFRFDSSTSQWKERGVGTLKFLKNNANGRLRVLMRRDQVLK
VCANHWITTTMNLKPLSGSDKAWIWMANDFSDGDAKLEQLAAKFKTTELAEEFKEKFEEC
QRLLLDIPLQTPHKLMDTGRTAHLIKKAEEMKSGLKDLKSFLTDEKTKIQDEEVQGDVTA
ASELSSLGIRPHGETGPTLEWDNYDLREEALDDTADSSVYTTPISSSPLRKNLFRFGEST
SGFSFSFQPGISPSKSPAKLNLSRASVGTDEEQDTTQDEERDGQYFEPVVPLPDLVEIST
GEENELVVFSHRAKLYRYDKEMKQWKERGIGDLKILQSYETKRVRLIMRRDQVLKLCANH
WISAAMRLEPMKGAEKAWVWSALDFAEEGEGKVEQLAVRFKMQETANTFKQVFEEAKAVE
EKSELMTPVTPRLSAPSESGSSATSESTTTSLCGQAAIAVLEETTQERTATSPAVRSTAA
GSQSPVNPLKTVVSPPKFVFGSDSVQKIFGSPKSESQASASVSGLTAKDGGSSVKPTIPA
PAFKMHTGSPQAAAAEASSSGSDDDSDVEIVFVREPTAEQAALARKLLLPLTFFCYKNEP
GYTSDDEPDDEDFEAAVRALNGKLYPDAPGAAVAVCAEEPDCQFVWEKKPTPEEEERAKS
LQLPPTFFCGLSATDSEPDSEEPEDFETELRKAQQDLVAQLNRGEPVSTDPAEPSQASFS
GPSTSRAEPADGRPTPGDQPGEKPTDTQSETPSSSSSPIDLSTKKSTEPESRTDTTAAQD
SSSFGFDSVAGFSFAELAKNTDGFAFGSNDANFSWANAGATVFGAAAPTEAKNMAAEEGS
DEEEASNNVDIYFEPIVSLPEVETKSGEEDEEILFKERAKLYRWDRDLGQWKERGIGDLK
ILFHPTKHFYRVLMRRDQVLRVCANHTISESMELKPMNTSANALVWTATDYSDGEGEVEQ
LAAKFKTSEIAESFRKTFCECQSRIGQTGDDASVLSRVQEHSRDTNPLVFLRVAADGEPL
GSITIELFSHIVPKTAENFRALCTGEKGFGLQNSVFHRVIPDFMCQGGDITKSDGTGGKS
IYGAAFEDENFDVRHTGPGILSMANRGRDTNNSQFFITLKKAEHLDFKHVAFGYVRDGMS
VVQQMGELGTKGGAPAKKLVVTECGQL
NT seq
9084 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggagtaaggctgaagtggaccgctacgtttcctccgtacagagttcctctcct
tcactcaaagagaagccggtcaaaggatttctatttgcaaaactgtactttgaagcaaaa
gaatatgaacttgcaaaacggcatgtatcggagtatctcaaagtgcaggagagggatccc
aaagcacacaaattccttggacagctctatgaaagagagggagagatcaacaaggcaatc
ggttgctacaagcgctcggtggacttgaacccggtgcagagagacctggtgctgaaagtt
gccgagctgtttgttggtaagggagactgcaacagcagagccgagttctgggtggaaaaa
gctgcaaaactcttgcctggaaacccagaagtcttcaacttaaaggagcgcctattgagc
cgtcagggccagcagggttggaatcagctgttcgacctcctccaggccgagctggcagcc
cggccggccgactctctggtgaatgtaaagttggttcagctgttttgccaggacggtcgg
ctggatgaggccgtcaaacattgtctggctactgagaaaaagggctttctgcgcaacagt
ctggactggtacaacgtgcagcggaacacgttacaggagtatctggctcagcccagcgtt
ttaaataatgagaagatgtgtcgacgtctccaaagagaagtgctgctggcgcactgcagc
ctgctgcgaatcagactgtctgagagcggcgtgcagccaagccttgaagcattcagaagt
ttcgaccaagctatgcaggcgctgagcgtagtcgccgcacgctttgccgatgaactcttt
gaggtgtttgtggagatgagggctcacctgtacctgcatgccgccacgctgctgctgaaa
atggctcaggaccagcagcacgcctggagagccgtcatcgacctggccgcgctctgctac
ctgctggcataccaggctcccagaccaaagactaacgtgaccaaaagagaccagtcggcg
ccgcagctgctggagctgctggccagtgaccggcagagtcaggcggggcacatgctgttg
aacctgagcgccgacgcctccactttgataagagaggtggtggaggcgtttgggaaccgt
atcggtcaggagtctctgtttgagctcctctggggtccgcaggcttcctccgcgtcctcg
tttatcgccaacgacgacattcactcgctcagctctctgggtccagagctctccaaactg
gccaagtgggactcgggctccatcttgctgcacggcggggacctgcagcatctgagctgg
ctggggctgcagtggacgctgctggaccagaggccgcccatgcgcgactggctgcagcag
ctgtttcccaggctgacgctggaaacgtccaagctggacaccaacgcgccggagtcgatc
tgcctgctggacctggaggtgtttttatgcggcgtggttttctgcagccactgtcagctt
caggacacggcgaagatcagccgcagcctgagtccgcggcagcagcagctcttcgagcct
cgctgccttcctcttcctctcctccgcctcctcgccacgcagcgacagagggagtggtgg
gacgccgtctacagcctcatccacaaacgagcccttcctggcacgtcggccaaactgcgg
atggttgtgcaacatggcctgaacacgctgagggccggagagaaacacgggcttcagccg
gcgctgataatccactgggctcagattctgagccagacgggcgatggaataaactcgtat
tacgaccagaaggagtacgtcggccgcagcgtccactactggcaggttgtgactttactg
ctggagaaaataaaaagccgacgaagcataccagaaccgctggaccctctcttcatacac
ttcgcctctaaggacattcagatttccgctgtgaaaggttatgaagacgaagcgaaaatc
gcgttcgccgttcttctggacatcgaaggcagaactgaggaggcgatcgcgactttagaa
agcatcaacaacatgtcatccatctggcatttagcacagatttatcagcggctggcagag
gaggccagcaatggcgtggaggagacccaggacaggtgtttaactttcctgaggaagttc
aggaactacttgtcaaaaatctacaacgccaatgcagacgacatcgaaaggcttcccgtg
tccatggaggaagtggtggacctcctgaacgacgtaaatcagcagcttggtgaaactcaa
gaggacatggaagaggaagaggagcaggaaattaaccttcggcgaggaccgactcactcc
agcccggctcgtctcacagaaaccagcgccaccatttcgcacatcaagtttgcttctccg
tctccgagcaaaagcatcgtttctccttccaaaagactgatttcaccaaagacgccgcct
cattggattgaagaccagaaaagtctcctccagatgttatgtcagcaagtagaagccctc
aagaatgaggttcatgatctcaaacacaacgcatcagggaactccggctcgcctcaccat
aagatgtatggagacacctacagagccgagagcttgcaggagccgttcaccccggtccag
tcctaccacggagccccactaacagttgccaccacaggccctcctgtttattacaaccag
tctcctgcctacagctcccagtatttactgcggacagcggcaaatgtaacccccaccaag
ggtccagtgtatggggtgaaccgtatgcccccacagcagcatatgtatgcctaccagccg
cccacgcacacgcctccgctgcagaccgccccgtcctgcatctaccctccgcaggaacaa
gtcttcggttcccctcttcggtttgaatctcaagccacaggccttctctctccatacagt
gaggaatattatggccagagcgtcacccagcagactaaccccactctgcctgagcctggc
tacttcaccaagccctctgtcgcccccgttcaaccaccaaaggccgtcgaggggaagcct
gtggactttgggaagctttccttcagccagcaggctgcaactgaagtacccagagtgcca
aatttcggtgcagggtcagttggcccggctacaacttcacctgcttttaaattcaattgt
tttccgaaatcctctgagagagatttaaatttctgttcaccccaaaccaagcaaagtgaa
agtttgctcggcctcctcacttcagacctccccccaaaacccgactcgtttccagagaag
ccaccggcccaagagcagcccccaggccaccagagcatcttcaccttcgggaataaaaac
ataagcagcttctcgtttgtagattccactccaaacgcatcagctggaggtctgtttggg
aagcctgagcaaccgtttaagttgggtgaagtaacagcgtttggcatcggcaagacatca
gagctggagaaggccgcagagagcgatgagagcacacatgttgaggaggacgaagacggt
cctcactttgaaccgatcgtccctcttcctgataaggtagatgtgaaaacaggtgaagaa
gaagaggaggagatgttctgcaacagggcaaagctgtaccgattcgacacggagacaaaa
gaatggaaagaacgaggaatcggaaatattaaaatcctgaaacacaacactaaagggaag
gtccgcctcctgatgagaagagagcaggtccttaagatctgtgcaaatcactacatcacc
gcagacatgctgctgagacctaacgccggctcagacaaatcctgggtgtggaacgccatt
gactatgcggatgaagagcctaaacctgaacaactggcgattcgcttcaaaactgtggat
gaggcggctcttttcaaagccaagtttgaggaagcccaaaaggtgacgagcaaatcgcca
gaaaagcaaaaacagcaagagaagaaagaggaaacctccaaagacttgggtttactggcg
tctcggtttgctcttaaagaaggcgagtgggagtgcgctgtgtgtgatgttcgaaataaa
gcaacggctgtgcagtgtgcagcatgcaacactcccaatccacagtcttcatctaaacca
gaacttcaggttactactgaagccaaaaccagcccatttaacttcaagtttggtacagat
acatcaaagcccagtggttcaacccctacatttacaggatttggtgcttttggaacttca
gtaccctcctcttttacattcgggatgagctcctcaaaacctaccgacaaaccggctggt
ccatttggtttcagctttggttcacaatttcccacaaagccagagcagtgggactgtggc
aagtgttctgcaaagaatgaagcatcaacagacagttgtgcttcttgtaaaactcctaaa
actacagtcaaaacagccgagatagcacaaattgctccagcaccggaagctcctgctaca
cagtcttctgtatctgcagttgatgctggatttgctgcacgcttcagcaaaaagccagga
cagtgggactgtgatgtttgtgaagtgagaaatgaagcctctgcagacaaatgtgtttcc
tgtcaaactccaaacccagcttcaaagtcatccactgtggctccagcagcaccagctgca
cctgcagggtcaggttttgcggcaaattttgccatgaaagacgaacagtgggactgcaac
gtctgtttggtcagaaatgaagggtcagcagctcagtgtgtttcctgccagtctccaaat
ccaaatccttctttagaggccatgtttggcaagaaggaaggagaatgggactgtgacgct
tgtctcgtgagaaataaggcctcttctaatgaatgtgtggcctgtaaaacctcaaaccct
aatgctaaaagcacaatcacatctgctgcttctgcctcgtctttcagtttcaacattgga
accacaagttcatccaaccaggctgctggatctgcatttacttttgggagcagtggtgct
tttcagtttggacaaaataaagacaaagcttcagcatctgcattcaagtttgaagctcct
caggctgcgccagccaccacaacctcctctggattctctttttcaatgcccatcccagct
ggtggcttcaagtttggcgttcaggactcagcaacaggtttggcctcatctaataatcaa
acttcgacagggtctgcttccagtatcctcaaaaacatggctgacaaacacaaggagaaa
gaaaatgtgtctacgccttccatagaccaaacggaaaaagatcaaaatcctttaattgct
ggaaaagccgatacgtttagttttgcagacttggccaagtcctccgaaggaaccttccag
tttggccagaaagatcccaacttcaaaggtttctcgggagcaggggcgcaggtattcgca
acgccacagacgacccctaccaaggcagaggcctcaaacgaactggaagacgacggcatg
tataaaacggaagaacacgacgacatccagtttgaaccagtggtccagatgcctgacaaa
gtggacctagtgactggtgaggaagatgaacaggtcctctactcccagcgtgtcaaactc
ttccgattcgattccagcactagtcagtggaaggaacgtggtgtaggaaccctgaagttc
cttaaaaataacgcaaatggccggctcagagtgctaatgagaagggatcaagttctgaag
gtttgcgccaaccactggatcaccaccaccatgaaccttaaaccgctgtctggctcagac
aaagcctggatatggatggccaacgacttctctgatggagatgctaaactcgaacagctg
gcagccaaatttaaaaccacggagctagcagaggagttcaaagagaagtttgaggaatgt
cagagacttcttttggatatccctctgcagacgccccataagctgatggacactggtcga
acggctcacctcatcaagaaagcagaggagatgaagtccggtttaaaagacttaaaatcg
tttttgacggacgagaagacgaaaatccaagacgaagaagtgcagggagacgttactgcc
gcaagcgaactttccagtttagggatcaggcctcatggggaaacaggccctaccttggag
tgggataactacgacctacgggaagaagctttggatgatactgctgactcatcagtctac
accacccccatttcgagcagcccccttaggaagaacctcttccgctttggagaatccaca
agtgggttcagcttcagtttccaacccggcatcagcccgtccaagtctcctgcgaagctc
aacctgagcagagcatcagtgggtaccgacgaggagcaggatacaactcaggacgaagag
cgagacggacagtactttgaacctgtcgtacctttgcctgacttggttgagatttctact
ggagaggaaaatgagctggtggtcttcagccacagagccaaactgtaccgttatgacaaa
gagatgaaacagtggaaggagaggggcattggagacctcaagatcctgcagagttatgag
accaaacgtgtgaggttaataatgaggagagatcaggtgctcaagctctgtgccaaccac
tggatctcagccgccatgaggctggagcccatgaagggggcagaaaaggcctgggtctgg
agtgccttggactttgccgaagaaggagagggcaaagttgagcagctggctgtgaggttt
aagatgcaagagactgcaaatacattcaaacaggtctttgaagaggccaaggcagtggag
gaaaaatcggaactcatgactccggtgacgccaagactctcagcaccatcagaaagtgga
tcgtcagcaacatctgaaagcacaactacatctctttgtgggcaagcagctattgctgtt
ctggaagaaacaacacaggaacgtacggcaacgtctccggccgtcaggtcgactgcagct
ggatctcagagtcctgtcaatcccctgaagaccgtggtgtctcccccgaagtttgtgttc
ggctctgattctgttcagaagatttttggctctcctaagtcagagtcccaagcatctgca
tctgtgtctggtttgacggccaaagatggtggaagctcagtcaagcctactattcctgct
ccagcattcaaaatgcatacaggttctcctcaggcggcggcggcggaagcttccagctcg
ggttcggatgacgactccgatgtggagattgttttcgtcagagagcccacagctgagcag
gcggcgttagccaggaagctcctgctgcctctcaccttcttctgctacaagaacgagcca
ggctacaccagcgatgacgaacccgatgatgaggactttgaggcggctgtaagagccttg
aatggaaagctctacccagatgctcctggagcagcagtagcagtctgtgctgaggagcca
gactgccagtttgtttgggagaagaaaccaacgccagaggaagaggagcgggcgaagagc
ctccagcttcccccgacgttcttctgcggcctgagcgccacagacagcgaaccggacagc
gaggagcctgaagactttgagacggagctacgcaaagcccaacaagacctggttgcccag
ttaaacagaggtgagccggtctccaccgatcctgcagaaccctcacaggcctcgttctcc
ggcccgtcgaccagcagagcagaacctgcagacggcagacccacaccaggtgatcagcca
ggagaaaaacccacagacactcagagtgaaactcccagcagcagcagttctcctatcgac
ctgtccaccaagaagagcacagaaccagagtccagaaccgacaccacagctgctcaagat
tcttcctcctttggcttcgactcagtcgctgggttttcgtttgctgagctcgccaaaaac
actgatggattcgcatttggatctaatgatgccaatttctcctgggcgaatgccggagcg
actgtgtttggagctgcggctcccactgaggctaaaaacatggccgccgaggaaggaagt
gatgaagaggaggcctccaacaatgtggatatctactttgagcccatcgtttctctacct
gaggtggagacgaaatctggcgaggaagacgaggaaatcttgtttaaagagcgagccaag
ctctaccgatgggaccgcgacctcggccagtggaaggagcgcggcatcggagacctcaag
atcctcttccacccgaccaaacacttctaccgggtcctgatgcgaagagaccaggtgctg
agggtttgtgccaaccacaccatctcagagtccatggagctgaaacccatgaacacctcc
gccaacgcgctcgtctggaccgccaccgactactcggatggtgaaggtgaggtggagcag
ctggcagcgaagttcaaaacctcagagatagccgagtcgttcaggaaaaccttctgcgaa
tgtcagagccgcatcggtcaaaccggcgacgacgcttcggtgctgtccagagtacaggaa
cactccagagacacgaacccgctggtgttcctcagggtggcagccgacggcgagccgctg
ggctccatcaccatcgagcttttctctcacatcgtccccaaaacggcggagaacttcaga
gcgctgtgcaccggagagaaaggcttcggcctgcagaactccgtcttccatcgggtcata
ccggacttcatgtgtcagggaggcgacatcaccaaaagtgacggcaccggcggcaaatcc
atctacggcgccgcgttcgaggacgaaaacttcgacgtccggcacacggggccgggcatc
ctgtcgatggcgaaccgtgggcgggacaccaacaactcgcagttcttcataacgctgaag
aaagccgaacatttggacttcaaacacgtggcgttcggctacgttcgggacgggatgagc
gtggtgcagcagatgggagagctgggcacgaagggcggggctcccgccaagaagctggtc
gtcacggagtgcggacagctgtag
DBGET
integrated database retrieval system
