Xiphophorus maculatus (southern platyfish): 102218576
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Entry
102218576 CDS
T02923
Name
(RefSeq) PR domain zinc finger protein 1-like isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102218576
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102218576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-met
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2HE
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
102218576
NCBI-ProteinID:
XP_014329724
Ensembl:
ENSXMAG00000016765
LinkDB
All DBs
Position
13:14500373..14508919
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AA seq
712 aa
AA seq
DB search
MKLESSLSDMSAWREVDFALNCTYIVPDQVSDPSFSLPKAMTSIPRNLTFDYSADNEVTG
VFSKEYIPQGTRFGPLQGDLYTKDSVPKEANRKYFWRIYSGGQLQHFIDGYDVQKSNWMR
YVNPARCLAEQNLVACQNGRDVYFYTIRPVEPKQELLVWYSQEFAQRLCSQQGDLRHKHS
DEEHPKQHLPQQTFLQGRTKEEVKEQLEDGEEKIDVEMLERDTPPDTPDDQIMDFSRKMD
REEDPEGRGVIPSPQPDRREALLGLNHPYLSDHHPSLPAPHRGLPLHLHGLYGHREGLVS
SYPPLYSHSRHLQPPYQFLPPYGPHYPRLVLPPYSPPFPSVIPSRGSLRYSSYLGTDGVP
YPPIAPPNLLPVSLPYAPSSQGGLKELTPNVSPPRGAPATPELSPPAKPDSYHPSPEQSP
SSCEEAMNLSLALNKSSTAPRNGPGHKSLPYPLKKQNGKIKYECNICSKTFGQLSNLKVH
LRVHSGERPFQCHLCKKSFTQLAHLQKHHLVHTGEKPHECQVCHKRFSSTSNLKTHLRLH
SGEKPYQCKLCNTKFTQYIHLKLHRRLHSSRDRPYRCALCSQTFFHRFSLFVHQRSCCLA
NSACPVNVHMKEMVERFDASQEADTLTETASTSQVGEAVEHWLARTLEGEGKEDQKEATV
LLKALTAAINAPVTPMVPSAVPVSHHSPTLGFQERASVVHLHRRPTVKTEGQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggagagcagcctgtcggacatgagcgcctggagggaggtggactttgctctc
aactgcacctacattgttccggaccaggtgtcggacccgagcttcagcctccccaaagcc
atgacctccatcccacgcaacctcacctttgactacagcgcagacaacgaggtgacaggt
gtgttcagcaaggagtacattcctcagggaactcgctttggccccctgcagggagacctc
tacaccaaagacagcgtaccaaaggaggccaacaggaagtacttctggaggatttacagc
ggcggtcagcttcaacacttcatcgacggctatgatgtccaaaagagcaactggatgcgt
tacgtgaacccggcgcgctgcctggccgagcagaacctggtggcctgccagaacggccga
gacgtctacttctacaccatccggcccgtggagcccaagcaggagctgctggtgtggtac
agccaggagtttgctcagagactctgcagccagcagggtgacctccgacacaagcacagc
gatgaagagcatcccaaacagcatctacctcaacagacatttcttcagggcagaacgaag
gaggaggtgaaggagcagcttgaagacggtgaggagaagattgacgtggagatgttggag
agagacactcctcctgacacgcctgacgatcagatcatggacttcagcagaaagatggac
agggaggaagatccagaaggccgaggcgtcattccctcccctcagcccgaccgcagggaa
gccctgctgggcttgaatcacccctacctatccgaccaccacccctctctgcctgctcca
caccgaggtctcccgcttcacctccatggcctctacggccacagggagggcctggtctcc
tcttacccgccgctctactcccactccagacatcttcagcctccttaccagttcctccca
ccgtacggtcctcactatcctcgcctcgtcctccctccctactcccctcccttccccagc
gtcattccttcacgaggatccctccggtacagcagctacctgggcactgacggagtgccg
tacccccccatcgctccacccaacctgctcccagtgtccctgccatacgctccgtcgtct
caaggaggcctgaaagaattaaccccaaacgtttcaccaccaagaggcgctccagccacc
ccggagctgtcgccgcctgccaaacctgacagctatcatccctctccggagcagtctccc
tccagctgtgaggaggccatgaacctcagcctggctttgaacaagagcagcacagcgccg
cggaacggacccggacacaaatccctgccctaccccctgaagaagcagaacggaaagatt
aaatacgaatgtaacatctgctccaaaaccttcggacagctctccaacctaaaggtccac
ctccgagtgcacagcggtgagagacccttccagtgtcatttgtgcaagaagagtttcacc
cagctggcccacctccagaaacatcacctggtccacaccggagagaagccccatgaatgc
caggtgtgccacaaacgcttcagcagcaccagcaacttgaaaacacacctgcgactgcac
tcaggggagaaaccttatcagtgcaaattatgcaacaccaagttcacccagtacatccac
ctgaagctgcaccggcgcctccacagcagccgcgaccggccctaccgctgcgcgctctgc
tcacagaccttcttccaccgattcagcctcttcgtccaccagcgcagctgctgcctggct
aactccgcctgtcctgtcaacgtgcacatgaaggagatggtggagcgcttcgacgccagc
caggaggcagacacgctcacagaaaccgcctccacctctcaggtaggggaagctgtggag
cactggctggcccgtacgctggaaggagaggggaaggaggaccagaaggaggccacggtt
ctgctgaaagccctgaccgccgccatcaacgcaccggtaacacccatggtcccgtcggcg
gtgccagtgtcacaccacagccctactttgggcttccaggagcgggccagcgtggttcac
ctccacagacggccaacagtaaaaacggagggacagtga
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