Xiphophorus maculatus (southern platyfish): 102218640
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Entry
102218640 CDS
T02923
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102218640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102218640
03036 Chromosome and associated proteins [BR:
xma03036
]
102218640
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102218640
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102218640
Chromatin remodeling factors
BAF complex
102218640
PBAF complex
102218640
GBAF(ncBAF) complex
102218640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
102218640
NCBI-ProteinID:
XP_023199334
Ensembl:
ENSXMAG00000015611
LinkDB
All DBs
Position
12:3730950..3771537
Genome browser
AA seq
1605 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QAQGQSDYSQDSMYPMHKPMEAAMNDKTMAEAMHFGHMKGVGMRSLHSGMGPPQSPMDQH
SQGYMSPHPSPLGIHEHASSPMSGGGGGPTPPHMPPAQPSPMMSMDPQGGMASMSGMGQP
GRGPSSFSPIQLQQLRAQILAYKILARGQPLPENLQLAVQGKRSLPTMQQQQPQAALPPQ
QQPQQPQQQQPQQQQQQQQQQASGASPYRPSGMSMAPMSGPQSSPCPTPALQGHNQSTGP
KPWTDGQASDNQAQKHLTPVPSGRPSPAPPQAPVGAPGPVPGSSGAVHPPGQQVSPMLQM
QQKQNRITPVQKPQGLDPVGILQEREFRLQARIAHRIQELESLPGSLPPDLRTKATVELK
ALRLLNFQRQLRQDVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQE
KKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTRAVANWHTNTEREQKKETERLEKE
RMKKLLEEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRRKT
KKKKVEGDGEGTSAIGPDGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLE
MNPGYEVAPRSDSEESGSEFEEEDEEEMGKAETEEKKKVDPNGDKVAENDTKNIIESAKQ
DVDDEYSVPTGQTSSQSYYGVAHAVIERVEKQSSLLINGMLKQYQVQGLEWMVSLYNNDL
NGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVKIA
YKGTPGLRRGLVPQLRSGKFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKL
TQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER
VDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQRVLYRHMQK
GILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIINGHE
LYRASGKFELLDRILPKLQATGHRVLLFCQMTSLMTIMEDYFGYRNFQYLRLDGTTKSED
RAALLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG
QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE
EQNEDEDEVPDDETLNQMIARNEDEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWI
IKDDAEVERLTYEEEEEKMFGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEIEEEIRLK
KRKRKRRQDKDSSSRDDGGMKAKKRRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDGSG
RQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERVRNHKYRSLGDLEKDVMLLCQNAQT
FNLEGSQIYEDSIVLQSVFKSARQKIAKDEDSEDDSDEDDDDDYDSEAEAKSVRVKIKLG
RDGRSHDKGKKRQSRGKAKPVVSDDDSDDDQDDNDLSDKSKSDDD
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccgtcagacacgtcaggtggcatgtcccatcctggcccgtcaccaggggca
ggcctgtccccggggcccatcttgggccccagccccggacccgacccctcaccaggttct
gttcacagcatgatgggccccagtcctggaccagggacacccaacgcaccgcacggcatg
caggcccagggacaaagcgattactctcaggacagcatgtatcctatgcataagcccatg
gaggcggccatgaatgataagacgatggccgaggcgatgcatttcggtcacatgaaaggt
gtcggcatgcgatccctgcacagcggcatggggcctcctcagagcccaatggaccagcac
agccaaggatacatgtctcctcatccatccccactgggaatccatgagcatgcctccagc
cccatgtccggaggtggaggagggccgaccccgccccacatgcctccagcccagcccagc
cccatgatgtccatggaccctcagggaggcatggccagcatgtcagggatgggccagccg
gggcgcggcccctcctccttcagccccatccagctgcagcagctcagggcgcagatcctg
gcctataagatcctggcccgcgggcagccactgcccgagaacctccagctggctgttcag
ggcaaaaggagcctacccacgatgcaacagcagcagccgcaggcagcgctgccgccgcag
cagcagccacaacaaccacagcagcagcagccacagcagcagcagcaacagcagcagcag
caagcatctggtgctagcccatacaggccttcaggtatgtcgatggctcccatgagcggc
ccccaatcaagcccctgcccaacaccagcactgcaaggacacaatcaaagcaccggaccc
aagccttggactgacggtcaagctagtgacaatcaagcacagaagcacctcaccccggtc
cccagtggacgcccgtctcccgctcccccccaggcgcctgtaggggccccgggccccgtc
ccggggagctcaggggccgttcaccctccagggcagcaggtgtcccccatgctccaaatg
cagcagaaacagaaccggatcacaccggtccagaagccccaggggttggacccggtggga
atcctgcaggagagagagttcagactgcaggcccggatcgctcatcggatccaggaactg
gagagtctgcctggctctttgcctccagacctccgaactaaagcgacggtggagctcaag
gcgctgcggctgctcaacttccagcggcagctgaggcaggatgtggtggcgtgtatgagg
cgcgacacgaccctggagacggccctcaactcgaaggcgtacagacgcagcaagcggcag
acgctcagggaggcgcgcatgacggagaaactggagaagcagcagaagctggagcaggag
aagaagcgccgacagaaacatcaggaatatctcaacagtattctccaacatgccaaggac
tttaaggaataccatcgctcggtgtccgggaaaatccagaaactcacccgagccgtcgcc
aactggcacacaaacaccgagcgggagcagaaaaaggagacggagcggctggagaaggag
aggatgaagaagctgctggaagaggatgaggaaggctatcgaaaactcattgaccagaag
aaggacaagcgtctggcctacctgctgcagcagacggatgaatacgtggccaacctcacg
actctggtgtacgaacacaaagccgctcaggctgccaaggagaagaagagaaggaagacg
aaaaagaagaaggtggaaggagacggtgaaggtaccagcgccattggaccggatggcgag
cccatggatgagagcagccagatgagcgagctgccagtcaaagtgatccagaccgagacc
gggaaggttctgcaggggaccgatgcccccaagtccagccagctggaggcttggctggag
atgaaccctgggtatgaagtcgctccccgttcagacagcgaggaaagcggctcagagttc
gaggaagaggatgaagaggaaatgggcaaggcggaaacggaggagaagaagaaagttgat
cccaacggagacaaagtggctgagaacgacaccaagaacatcatcgagtcggccaaacaa
gacgtggatgatgagtacagcgtccccactgggcagaccagctcccagtcgtactacggt
gtggcgcacgccgtcatcgagagggtagagaagcagtcgtctctgctgatcaacggcatg
ctcaaacagtaccaggtccagggtctggagtggatggtgtccctctacaacaacgacctg
aacggcatcctggctgatgaaatgggcctggggaagaccatccagaccatcgccctcatc
acctacctgatggagcacaagaggctcaacggcccctatctcatcatagttcctctctcg
actttgtccaactgggtttatgaacttgacaaatgggctccttctgtggtcaaaattgct
tacaagggaactcctggtctgcgtcggggtctcgtccctcagctccgcagcggcaagttt
aacgtcctcataacgacgtatgaatacatcatcaaggacaaacacatcctggcgaagatc
cgctggaagtacatgatcgtggacgagggccaccgcatgaagaaccaccactgtaagctg
acccaggtgctgaacacccactacgtggctccgcgccgcctgctgctcaccgggacgccg
ctgcagaacaagctgcccgagctctgggccctgctcaacttcctgctgcccaccatcttt
aaaagctgcagcacctttgagcagtggttcaacgcgccgttcgccatgactggagagagg
gttgacctaaacgaggaagagaccatcctgatcatccgccgtctgcataaggtgctgcgc
ccgtttctgctccgcaggctgaagaaggaggtggagtctcagctgcccgagaaagtggaa
tacgtcataaaatgcgacatgtctgcgatccagagggttctctaccgccacatgcagaaa
ggcatcctgctgaccgacggctcggagaaggacaagaagggcaaaggcggagctaagact
ctgatgaacaccatcatgcagctgaagaagatctgcaaccatccgtacatgttccagcac
atagaggagtcttttgctgagcacttgggctacccgaatggcatcatcaatgggcatgaa
ctgtacagagcttctggaaagtttgagctccttgatcggatcctaccaaagctccaggcc
actggacacagagtcctgctgttctgccagatgacgtctctgatgacgatcatggaggat
tacttcggctatcgcaacttccagtatctacgcctcgatggaaccactaaatccgaggac
cgagccgcactcctaaagaaatttaacgaggaagggtcccagtacttcatcttcctcctc
agtaccagagccggtggcctggggctcaacctgcaggccgccgatacggtcgtcatcttt
gacagtgactggaacccgcaccaggacctgcaggcccaggatcgggctcaccgcatcggg
cagcaaaacgaggtccgcgttctgcgcctctgcaccgtcaacagcgtggaagagaagatc
ctggctgctgccaaatacaaactgaacgtggatcagaaagtcatccaggccggcatgttc
gaccagaaatcctccagccacgagcggcgcgccttcctgcaggccattttagagcatgag
gagcagaacgaggatgaagacgaggtccctgatgatgaaacgcttaaccagatgatagct
cgcaatgaagacgaatttgatctgttcatgcgcatggacatggaccgtcggcgcgaggac
gcccggaacccgaagcgtaagcctcgtctgatggaagaagacgagctgccgtcgtggatc
atcaaggacgacgccgaggtggagaggctcacctacgaggaggaggaggagaagatgttt
ggccgagggtcgcgctgccggcgggacgtggactacagcgacacgctgaccgagaaacag
tggctgcgagccattgaggacgggaacttggaggagatagaggaggaaatccgcttgaag
aagcgtaaacgcaaacgacgtcaggacaaagactcgtccagcagagacgacggcggcatg
aaggccaagaagaggcgagggcgaccgccggccgagaagctctcgcccaacccgcccaaa
ctcaccaagcagatgaacaccatcatcgacacggtcatcaactacagagatgggtcaggc
aggcagctgagtgaggtgtttgtgcagctgccgtccaggaaggaactgccagaatattac
gagctgatcagaaaacctgtcgacttcaagaagatcaaggaacgtgtgagaaaccataaa
taccgaagtttgggcgaccttgagaaggacgtgatgcttctctgtcagaacgcacagacc
ttcaacctggagggatcccagatatacgaggactccattgttctccagtctgttttcaag
agtgccagacagaagatcgccaaggacgaagacagcgaggatgacagcgatgaggatgat
gatgacgactatgactcagaggccgaagccaagtctgtgcgggtgaagatcaagctgggt
cgggacggacgcagccacgacaaaggcaagaagaggcaaagccgcggaaaggccaagccg
gtggtgagcgacgacgacagcgacgacgaccaggacgataacgatctgtcggataaaagc
aaaagcgacgacgactga
DBGET
integrated database retrieval system
