Xiphophorus maculatus (southern platyfish): 102218732
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Entry
102218732 CDS
T02923
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xma00535
]
102218732
Proteoglycans [BR:
xma00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
102218732
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_6
LRR_9
LRR_14
LRRNT
LRR_LRWD1
DUF7409
Motif
Other DBs
NCBI-GeneID:
102218732
NCBI-ProteinID:
XP_005810785
Ensembl:
ENSXMAG00000018604
UniProt:
M4AVZ6
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All DBs
Position
17:6630589..6635389
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AA seq
342 aa
AA seq
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MFPLHVTLLVLLANIARCQYYDYDYQPFSMLGPSGPNCNKECDCPINFPSAMYCDSRKLK
FVPVVPTGIKYLYLQNNLIEEIKAGVFDNVTDTLRWLVLDNNQITNAKIEKGTIDKLTAL
EKLFFSFNEITEAVIPPSKSLEELKMTNNKLSKFPSGLLNDKENLTSVSLQHNELTSEGI
ADAFKGPKKLLSLDLSHNKLKKLPAGVPSSMEILYADYNEIDKIGAGYLKKLPTLRYLRV
SHNKLQDAGIPAGVFNVTSLLELDLSFNKLQSIPEINEQLEQLYLQANEISKFDLASFCK
FTGPLNYSRLKHLRLDANNVTHTDMPPESANCLRQASDIMFE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctctccatgtcaccctcttggtattactggccaacatcgcccggtgccagtat
tacgactacgactaccagcctttttcgatgcttgggccgtcagggccaaactgcaacaaa
gaatgtgattgcccaatcaatttcccaagtgcaatgtattgcgatagccgcaagctaaag
tttgtccctgtggttcccactgggatcaagtacctgtacctccagaacaacttgattgaa
gagatcaaggcaggagtttttgataatgtcactgacaccctgcgctggctggtgctcgac
aacaatcagatcaccaacgccaagatagagaaaggcacaattgacaaactgacggccctg
gagaagctattcttcagcttcaacgagatcacagaggcagtcattcctccctcaaagtcc
ctcgaagagctgaagatgacgaacaacaagttgtccaagtttccgtctggactcttgaat
gacaaggagaatttgacctccgtcagccttcagcacaatgagctaacctctgaaggcatc
gcagacgcattcaaaggcccgaagaagctgctgtcgttggacttgagccacaacaagttg
aagaagctgccagccggagtcccgagttcgatggaaattctctacgctgattataatgag
attgacaaaatcggagcagggtatctgaagaagctgcccaccctgcggtacctgagggtc
tcccacaataagctgcaggatgctgggattcctgctggggtgttcaatgtgacttcgctg
ttggagctggatctgtcgttcaacaaacttcagtcgatccctgagatcaacgagcagctg
gagcagctctaccttcaggccaatgagatcagcaagttcgatctggcgagtttctgcaag
ttcacaggaccgctgaactattcacgtctcaaacatctgcgtctggacgccaacaacgtc
acgcacaccgacatgccccccgagtccgcaaactgcctgcgtcaagcttcggacatcatg
tttgaatga
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