Xiphophorus maculatus (southern platyfish): 102218810
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Entry
102218810 CDS
T02923
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102218810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102218810
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
102218810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Pentapeptide
Motif
Other DBs
NCBI-GeneID:
102218810
NCBI-ProteinID:
XP_005807741
Ensembl:
ENSXMAG00000003551
LinkDB
All DBs
Position
7:complement(22186722..22238449)
Genome browser
AA seq
252 aa
AA seq
DB search
MSDQKEVNLSGVRQNKGVWLVKVPKYLSQQWEKATEKGEVGTISIEKKQGKTEVCFTLNE
ELAAMTAVGEKEESLQAPREYPFTMHTAGAQTMAVFSQTDADEVSLEGTVLHRAECRPVV
SDSYMKVKRLQVESVKPRRLVQQLDRAVATVFKPVANHDFNLEYEKKKKSEGKMVRADRQ
QVLDLLFSAFEKHQYYSFKDLVDITKQPVTYLKEIMREIGVCNRKGAHKCTWELKPEYRH
YQPSEEEEQKSP
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccaaaaggaggtgaatttatctggagtccgacagaataaaggcgtgtggctc
gttaaggttcccaagtatttatctcagcaatgggagaaagccacagaaaagggagaagtt
ggaacgatatcaatagaaaaaaaacaaggaaaaacagaggtgtgtttcactctaaatgag
gagctggctgccatgacggctgtaggagagaaggaggagtccctgcaggccccgagggaa
tatcccttcacgatgcacacagcgggtgcacagaccatggctgtcttcagccagaccgac
gcagatgaagtcagtctggaggggacggtgttgcacagagccgagtgccggcccgtcgtc
tccgacagctacatgaaggtcaagaggctgcaggtcgagtccgtcaagccgcggcgtttg
gtgcagcagctggaccgagccgtcgccaccgtcttcaagcctgtggccaaccacgacttc
aatttggagtacgagaagaagaagaagtctgagggtaagatggtgagggcggatcggcag
caggtgttggacctgctcttctctgcttttgagaagcaccagtactacagcttcaaggac
ctggtggacatcaccaagcagcccgtgacatatcttaaagaaatcatgagggaaatcggt
gtatgcaatcgcaagggagcgcacaaatgcacctgggagctgaagccagagtaccgtcac
taccagccgagtgaggaagaggagcagaaaagcccctga
DBGET
integrated database retrieval system
