KEGG   Xiphophorus maculatus (southern platyfish): 102219014
Entry
102219014         CDS       T02923                                 
Symbol
larp1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    102219014 (larp1)
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102219014 (larp1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 102219014
NCBI-ProteinID: XP_014330142
Ensembl: ENSXMAG00000018780
LinkDB
Position
11:complement(8131392..8169458)
AA seq 1093 aa
MATQVEALLPGNPLAKAEEHGKVIRGEPVEVGEEEEEEEQQRAKRQRGAADSSAEMGGTT
GGEEQTSTRAAELQDDGCDSEDKPGEEGVKGRKEFTDAPPPKVNPWTKKMNAVTVVSVNG
QPHSESSGPAKVVRAGNPPKARRGGKVGDFGDTNSWPTPGEIATKDMQMEAVGQSASGPP
PLRQVRDSWRIAGPKRSVAKKEPKDKRESNEESKENLKAKSDDSGEEKNGDDDPQKNGPK
KKGNKQKWLPLMIDVKPEGPRERSASRNNSRQNEQPRLAPNARNDLRDWHSQKYEREWRD
DHDEVSSVKSEGAPFRGGFRGRGRGRGRGRGRGRGGGRGHHDYHYGYKAFDGKDAPYGQK
FGSSVTYYYDNLSNSELYAADQELLKDYIKRQIEYYFSLENLQRDFFLRRKMDADGFLPV
GLIAGFHRVQALTTDVSLILEALKDSKEVEVIDMKIRRKDDPGRWPLPGLMAPNHTDFSQ
LINCPEFVPRQMAEEFRGSSRSSTPVHQQTKPDGDVSNLKTMPKGLSASLPDLDSESWIE
VKKRPRPSPARPKAPSLQQRERDDSLRSPLPPSGSSPAPLTAGNKDGAEPDEPEELDFMF
DEEMEQMDGRRNTFTDWSDEDSDCELDDHDVNKILIVTQTPPYLRKHPGGDRTGHHTSRA
KLTSELAKVINDGLFYYEQDLWDDKYEPEYATIKQEVENFKKVHLISREQFDCLTPEPPV
DPNQEVPPGPPRPQQIPTDALANKLFGVPDPSSTARSLPTTVPESPNYRSARTPRTPRTP
HRKDAAMTPRFYPVVKESRPVDAKTPRKRKTRHSSNPPLECHVGWVMDSREHRSRTASVS
SNASPSEGTPALGGVGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIG
QSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLVVEDGKEGYRYGLECLFRYYSYGLERKFR
PDIFKDFQEETMKDYEAGQLYGLEKFWAFLKYSKAKNLEIEPKLQQCLSKFKRLEDFRID
PPMDDGGRRRHPSSGDGRRRHPSQPSSRPHSQAGAAAPPTPVAASAGSSAKDVAKPANQN
QRAAAEPDAKTLK
NT seq 3282 nt   +upstreamnt  +downstreamnt
atggccactcaggtggaggccctcctacccggcaacccgctcgcaaaggcggaggagcac
gggaaagtgatccgcggtgagccggtagaagtgggagaggaggaggaagaggaggagcaa
cagcgggccaagcggcagcgaggtgccgccgacagcagcgccgagatgggagggaccacc
ggcggcgaggagcaaacctccacacgggcggcggagctccaggacgacggctgtgacagc
gaggacaagccgggagaggaaggggttaaaggcaggaaggagtttacggacgctcccccg
cccaaggtgaacccgtggaccaagaaaatgaacgccgtgaccgtggtcagcgtgaacgga
cagccacactccgagtcgagcggccctgccaaagtggtgagagcggggaatccacccaaa
gccaggcgaggaggaaaggttggagattttggcgacaccaacagctggccgactccagga
gagattgcaactaaagacatgcagatggaggcagtgggacagagcgcgtccggcccgccg
cctctcaggcaggtcagagactcgtggagaatcgctggtcccaaaaggtcggtggctaag
aaagagccaaaggacaagagagagagcaacgaggagagcaaggagaacctgaaggccaaa
tctgacgactcgggagaggagaagaacggcgacgacgacccgcagaaaaacgggccaaag
aaaaaaggaaacaagcagaagtggcttcctctgatgattgacgtgaagcctgaagggccg
cgggaacgctcggcgtcccgcaacaacagccggcagaacgagcagccgcggctggcgccc
aacgcccggaacgacctcagagattggcacagtcagaagtacgagcgggagtggcgtgac
gaccacgacgaggtttccagcgtgaagagcgagggggcgccgttccgcggagggttcaga
ggtcgcgggcgtggcagaggaagagggcggggccgaggccgaggcggcggcagaggtcac
catgactaccactacggatacaaggcgttcgacgggaaagacgctccgtacggccagaag
ttcggcagctcggtcacatattactacgacaacctgagcaacagcgagttgtacgccgcc
gaccaggagctgctcaaggactacatcaagaggcagatagaatattacttcagcctggaa
aacctgcagcgggacttcttcctgcgcaggaagatggacgccgacggcttcctcccggtc
ggactcatcgccggcttccacagagttcaggcgctcaccaccgacgtctcgctcatcctg
gaggctctgaaggacagtaaagaagtggaggtgatcgacatgaaaattcgccggaaggac
gatcccgggcggtggcctcttccgggcctgatggcgccgaaccacacggacttttcccag
ctcatcaactgtcctgagtttgttcccaggcagatggcggaggagttcagaggatcatcc
agatcttccactccggtgcaccagcagaccaaacccgacggagacgtgtccaacctgaag
acgatgcccaaaggcctctcagccagcctgcctgacctcgactccgagtcctggatcgag
gtgaagaagagacccagaccttcgcctgccagacccaaggcgccctcgctgcagcagagg
gaaagagacgattcgctgcgctctccgctgccgccatccggctcttcgccggcgccgctc
accgctggaaacaaggacggcgccgagccggatgagccggaggagctggacttcatgttc
gacgaggagatggagcagatggacggccggcgcaacaccttcaccgattggtcggacgag
gactcggactgcgagctggacgaccacgacgtcaacaagatcctgatcgtcacgcagacg
ccgccgtacctgcggaagcacccgggcggcgaccgcaccggccatcacacgtcgcgcgcc
aagctgaccagcgagctggccaaggtcatcaatgacggcctcttctactacgagcaggac
ctgtgggacgacaaatacgagccggagtacgccaccatcaagcaagaggtggaaaacttc
aagaaggttcatctgatcagccgcgaacagttcgactgcctgacccctgaacccccggtc
gaccccaaccaggaagtgccgccggggccgccccgcccccagcagatccccacagacgct
ctggcaaacaaactgttcggcgttcccgacccgtcctccacggcgcgctcgctgcccacc
accgtgcccgaatccccgaactaccgcagcgcccggacgccccgcacgccgcgcacgccc
cacaggaaggacgccgccatgacgccgcgcttctacccggtggtgaaggagagccggccg
gtcgacgccaagacgccgaggaagaggaagacccgacacagctccaaccctcctctggag
tgccatgtgggctgggtgatggactccagggagcaccgctcccgcaccgcctccgtcagc
tccaacgccagcccgtctgaagggacgcccgcccttggcggcgtcggctgcacgccgcag
tccctgccgaagttccagcacccgtcacacgagctgctgaaggagaacggcttcacgcaa
cacgtctaccacaagtaccgccggcgctgcctgaacgagaggaagcggctgggaatcggc
caatcgcaggagatgaacacgctgttccggttctggtcattcttcctgcgggatcacttc
aacaggaagatgtacgaggagttcaggcagctggtggtggaggacggcaaggagggctac
aggtacggtttggagtgcctgttccggtactacagctacggcctggagaggaagttcaga
cccgacatcttcaaggacttccaggaagaaaccatgaaagattacgaagcaggtcagctc
tacggcctggagaagttctgggctttcctcaaatactccaaagccaagaacctggagatc
gaacccaaactgcagcaatgtctgagcaagttcaaacgcctggaggacttcaggattgac
cctccgatggacgatggcggacgcaggagacacccgtccagcggagacggccggcgccgc
cacccctcccagccctccagccggccccatagccaggccggcgccgccgcccctcccaca
cctgttgctgcttctgctggctcctcagccaaggacgttgccaaacccgccaatcagaac
cagagagctgctgcagaaccggacgccaaaacactgaaataa

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