Xiphophorus maculatus (southern platyfish): 102219051
Help
Entry
102219051 CDS
T02923
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102219051
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xma01009
]
102219051
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102219051
Protein phosphatases and associated proteins [BR:
xma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102219051
Cell adhesion molecules [BR:
xma04515
]
Cadherins
Protocadherins
102219051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Syndecan
TMEM154
Motif
Other DBs
NCBI-GeneID:
102219051
NCBI-ProteinID:
XP_005802166
Ensembl:
ENSXMAG00000016502
UniProt:
M4APY5
LinkDB
All DBs
Position
23:complement(12762319..12958270)
Genome browser
AA seq
1217 aa
AA seq
DB search
MLSGRDMVILRWELLSLLAVILMVSCNAVPTDILYRVNEEQPPNTLIGSLAADQGLPDTG
HLYKLEVGTPFLRVDGKTGDIYTTEIPIDRETLRDCQNQFDDKCYLEFEVSITDMVKGIG
SGPRLIEGRIEVLDMNDNTPQFSSPILSLAIPENTHIGALFSIPMATDKDSGSNGVAEYS
LSSGPDADQLFSLQVALDTDEKQPQLVVMGNLDREKKDSYDLNIRVVDGGDPPRASSALL
RVTVTDQNDNAPKFERNHYEAELPENSPLGHSVLQVRANDADTGANGEIDYILHQASETV
QRLLRIDRSTGIIYVKGLVDREETNFLKFFVVARDRGPNSKSSKVLVTIIVKDQNDNAPA
IEIRGIGLVTHQDSVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPAS
ESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDVNDNTPTF
SPALLEVFFPEGNQPGDRVLDILATDADSGINAEMIYSIIESSANRLFEVDANTGEVRVK
NTLDREEVERYEFHIAAADKGLPSKTGTATVVINVLDRNDNEPKFMLNGYSFSVIENMLP
LNPVGVVTVTDADKGENSRVTLFVEPDNGKFVIQNGTGTILSSISFDREKESTYTFRLKA
VDGGEPPRSSYVGVTINVLDENDNAPYVTKPSNSSYTYLTPVTPPETRVEVVEAEDIDAG
LNAELYYSITGGNPYGLFQISSTSGEITLAQAFSGKHNGLHRLVVKVSDQGKPARYTTAL
VHVFVNETKSNVSLIEALVGHSLYTPLDRDIAGDPNYAYSQQTNILYAVLAGVAVVILVI
VAVVVIRHHLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKPRAPKPTKPLEEDEE
ASLQKGLKFNLINDVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKH
QAVQDLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYNNKQLPHRRVTFSTSNQAQDLQ
DASQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPL
PDVAMTGNCTRECTEFGHSDSCWMPGQSSPNRKVSKNAPKLSTFVPYQEMDGQEHLMANG
SPKPMVTEERGTGGGAGGSSSKVASMRFMTPYSSAYPGSGDSSGKDCGLEEIPLSQAAEY
HSATTPTGQTSKREIYL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccggcagagacatggtgatcctgaggtgggagctactgtccctcttggccgtc
atcctgatggtctcctgcaatgctgtgcctacagatattctgtatcgggttaatgaggaa
cagccacccaacacattgattggcagcctggcggcagaccaaggccttccagacactgga
catctgtacaagctggaggtgggcacccctttcctgagggtggacggcaaaactggggac
atctacaccacagagattcctattgaccgtgagacactgagagactgccaaaaccagttt
gatgacaaatgctacctggaatttgaagtgtccatcacagacatggtgaaagggattggc
tcagggccacggctgatcgaaggtcgcattgaagtgctggatatgaatgacaacacgccg
cagttctcttcacccatcctctccctagcaattccagaaaatacacacattggtgcactc
ttctccatcccaatggccacagacaaggactctggttccaacggcgtggctgagtactct
ctgagttccggaccggatgctgatcaactcttcagcctgcaggtcgctttggacacggac
gagaagcagccacagctggttgtcatgggtaacctggatcgtgagaagaaagactcgtat
gatctgaatattcgggttgtagatggaggtgatccaccaagggcgagcagcgctttactg
cgagtcaccgtgaccgatcagaatgacaatgcgccaaagtttgagagaaatcactacgag
gccgaacttccagagaacagcccactgggacactccgttttgcaggttcgagccaatgac
gctgacactggtgccaatggagagatagattacatcttacatcaagcatccgagactgtc
cagaggcttctgcgcattgaccgttccactggcatcatttacgtcaaaggcctggtagac
agagaagaaactaattttctcaagttctttgtggttgccagagaccgtgggcctaattcc
aagagttccaaagtcctagtgaccatcattgtcaaggaccaaaatgacaacgcaccagca
atagagattcgtggtattgggttggtcactcaccaggacagtgtggcaaacatctctgag
gacatgccgattggtaccccagtagcactagtccaagtgtctgaccgtgacgagggagaa
aacgctgtggtgacatgtgtggttgcaggtgacgtcccttttcaactccgacctgctagc
gagtcagccaatgatcgaaagagaaaatacttcctgcagacaactactctgctggactat
gaacgtattaaagattaccgaattgaaatagttgctgtggattccggtaacccagctctg
tcaagcaccaattctcttaaggtccaggtcacagacgtgaatgataacacaccaacattt
tctccagctttgcttgaagtgttctttcctgagggcaaccagccaggtgacagagtgcta
gatattttggccacagatgcagatagtggtataaatgcagagatgatttatagcatcatt
gagtcctctgctaacaggctttttgaagtcgatgccaacacgggagaggttcgtgtgaaa
aacacactggatcgagaggaagttgagcgctatgagttccatatcgctgcagccgacaaa
ggccttccgagtaaaactggaactgctacagtggttataaatgttctagaccgcaatgac
aatgaacccaaattcatgttaaacggatacagtttttctgtaattgaaaacatgctccca
ctaaatcctgttggtgtagtgactgtgactgatgctgataagggggagaactcaagagtg
acactgtttgtagaaccagataacggcaagtttgtgattcaaaatggaacaggaacgatc
ctgtcgagcatttcttttgaccgtgaaaaggaaagcacctacaccttccgtctgaaggct
gtggatggtggtgaaccacctcggtcttcctacgttggtgtgaccatcaatgtcctggat
gagaatgataatgccccctatgtcaccaaaccatccaactcctcctacacttatctgaca
cctgtcacacctccagaaacaagagtggaagttgttgaggctgaggacattgatgctggg
ctcaatgcagagctgtattattcaatcactggaggaaacccttatggcctttttcaaatc
tcgtccaccagtggggaaatcacactggcacaagcattctctggcaagcacaatgggctt
caccgacttgtcgtgaaggtcagtgatcaaggcaaacctgctcgatacaccacagcctta
gttcacgtgtttgtaaatgaaaccaaatctaatgtgtccctcattgaggcacttgtgggt
cacagtctttacacacctctggacagagacatagcaggagaccctaactatgcctacagt
cagcaaaccaacattttatatgctgtccttgcaggtgttgctgttgttattttggtcatt
gtagctgtggtggtcatcagacaccatctgcagaaagatactaaaagcggttaccaagct
ggcaaaaaggagagcaaagatctttatgctcccaagcagggacccaaaaatggcaaagga
aaaaagagcaaaaaacccagagctccaaaacccaccaaaccactggaagaggatgaggag
gcgagtttgcagaaaggtctgaagttcaaccttattaatgacgttaatgacagtcccaga
atccatctgccccttaactatccaccaggaagccccgacctgggccgtcactataggtcc
aactctcctttgccatctatccagctgcaaccacagtcaccctctgcctccaagaaacac
caggctgttcaggacctccctgcaaccaacaccttcgtagggacgggcgacaacaactcc
acgggctcggatcaatattcggattacagctacaaggccaacccacccaaatacaacaac
aaacagctgccccaccgccgagtaaccttctccacctccaaccaggcccaggatctgcag
gatgcatcccagcacagctactacgacagtggcctggaggagtcagagaccccaagctcc
aagtcatcatcgggccccaggatcggaccactagctctgccagaagaccactacgagagg
accacacctgatggcagcatcggcgagatggaacacccggagaacgacctcaggcccctt
ccagacgtggcaatgaccggtaactgcacccgtgagtgcaccgagtttggccactctgac
tcctgctggatgcccggccagtcttcccccaaccgtaaggtctccaagaacgcccccaag
ctctccaccttcgtgccttaccaggaaatggacggacaggagcacctgatggccaacggc
agcccgaagcccatggtgacggaggaacgtgggacgggtggtggcgctggtggcagcagc
tccaaagtggccagcatgaggttcatgaccccatacagcagtgcctaccctgggagcgga
gactcatctggcaaagactgtggcctcgaggagatcccactgagccaggcagcggagtac
cactctgccaccacccccactggccagacctccaagagagagatctacctgtga
DBGET
integrated database retrieval system
