Xiphophorus maculatus (southern platyfish): 102219180
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Entry
102219180 CDS
T02923
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04517
IgSF CAM signaling
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102219180
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102219180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102219180
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102219180
Intermediate filaments
Intermediate filament-binding proteins
102219180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
102219180
NCBI-ProteinID:
XP_023183264
Ensembl:
ENSXMAG00000005026
LinkDB
All DBs
Position
22:complement(2721540..2802522)
Genome browser
AA seq
2348 aa
AA seq
DB search
MELQSAPLSPLSPLAPPLDYAGLRTPSPVPGGSGRAPSPSRGAASPGPGFNYNQLEGRFK
QLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKG
RMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVET
EDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLK
KSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVEHPDEKSIITYVVTYYHYFSKMKALKVE
GKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNT
YRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVFTPREGKLISDINKAWERLEKAEHER
ELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEA
IETDIAAYEERVQAVVAVARELEAESYHDIKRITARKDNVIRLWEYLLELLKARRHRLEL
NLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADISIQADRVRN
VNSNAQKFASDTDGYKPCDPQVIRDRVAHMEFCYQELNQLAAERRARLEESRRLWKFFWE
MAEEEGWIREKEQILSLEDHGKDLTGTVRLLSQHKAFEDEMSGRAAHLQQTIRQGQQLVD
DNHFGAEKIKERIQDIQDQWAALERLSAVRKTRLQEACNLHQFQADADDIDTWMLDVLRI
VSSVDVGHDEFSAQALVKKHKDVAEEISSYRPVIEALHEQAQTLPPQDAGSQEVRARLAG
IEERYQEVAELTRHRKQALQDALALYKMLSEASACELWVDEKEQWLNGMDIPDKLEDLEV
VQHRFESLEPEMNSQASRVAVVNQVARQLVHSGHPGETQIRAQQDQLNTRWSQFRDLVDQ
KKENLNSALGVQNYHLECNETKSWIKEKTKVIESTQELGNDLAGVMALQRKLTGMERDLA
AIEDKLTDLDKEAERLASEHPEQAGAIRGRLAEITAVWDDMKGTLKNREESLGEASKLQQ
FLRELDDFQSWLSRTQTAIASEDKPNALAEAEKLLAQHENIKNEIRNYEEDYQKMRDMGD
MVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLN
NQEYVLAHTEMPATLEAAEAAIKKQEDFMTTMDASEEKISGVVDTGRRLVADGNINGERI
QEKVDSIDQRHKKNRQAAKDLLSRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEA
RNLHSKWLKHQAFMAELQSNKEWLDKIEKDGQALMAEKPETEAMVKEKLASLKVMWDDLE
STTQTKAKCLFDANKAELFTQSCADLDKWLTGLDSQLQSDDFGKDLTSVNIMLKKQQMLE
SQVEVRQKEVEELQKQSQALSQEGKGSDEVDGKRITVENKFQTLLAPLKMRRDNLMASRE
IHQFNRDVEDEILWVEERLPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFE
RSQQVLRAGSPTAEPIRQRLTELQALWERIRKETENRHSRLSEAHEAQQYYFDAAEAEAW
MSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADAVHQLSSTSRGLVAAGHPDSE
RIGMRQSQVDKLYAGLKDLAEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELG
QDYEHVTMLQERFREFARDTGNIGQERVDGVNKLADELINAGHGDAATIAEWKDGLNEAW
ADLLELIDTRTQILAASYELHKFYHDAKEILHRILDKHKKLPEELGRDQNTVETLQRMHT
TFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKNLLEAAEARRSKL
LDTADKFRFFSMVRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSF
TACIELGKALLARKHYAAEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFSRDAG
VAEAWLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFAALERLTTMELLEV
RRRQEEEERKRQPAEAAEAAAQSREGEPVSQNGLPSDQESPRENVDEAVNGVSERSPAGS
PGAARKAKPSQAATLPAKSQQDGATSLLEAFLHRKHEWEGHNKKASNRSWHNVFCVINQQ
EMGFYKDQKSAAQGVPYHSEIPVSLKEALCEVALDYKKKKHVFKLKLTDGNEYLFQAKDD
EEMNSWISTIVAAAGSRVEVTPSSHSTPAPAARAQTLPATVAASTAESSPGKREKDKEKR
FSLFSKKK
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcagagcgccccgctgtcccccctctctcccctggcccctcccctggactac
gccgggctccggaccccatccccggtaccgggcgggtcgggccgggcccccagccccagc
aggggggccgccagcccggggcccggcttcaactacaaccagctggagggacggttcaag
cagctgcaagatgagcgtgaagcagtgcagaagaagaccttcactaagtgggtgaactcc
cacctgtccagggtgtcgtgtcggatcacggacctgtacatggacctgagggacggccgg
atgctcatcaagctgctggaggttctgtctggagagaggctgcccaaacccaccaagggc
cgcatgcggatccactgcctggagaacgtggacaaggctctgcagttccttaaggagcag
cgggttcacctggagaacatgggctcccacgacatcgtggacggaaaccaccgcctcacg
ctgggcctcatctggaccatcatcctgcgcttccagatccaggacatcagtgtggagacg
gaggacaacaaggagaagaagtcggctaaagacgctctgctgctctggtgccagatgaag
actgcagggtatccaaacgtcaacatccacaacttcaccaccagctggagagacgggatg
gccttcaacgccctcatccacaaacacagacctgatctgatcgactttgataagctgaag
aagtccaacgctcactacaacctgcagaacgccttcaacctggcagagcaacacctgggg
ctcaccaagctgctggacccggaagacatcagcgttgaacatcctgatgaaaaatccatc
atcacctacgtcgtcacctattaccactacttctccaagatgaaggcgctgaaggtggag
ggcaagaggatcggcaaggttctggacaacgccatcgagacggagaagatgatcgagaag
tacgagtctctggcgtcggacctgctggagtggatcgaacagaccatcatcatcctcaac
aacaggaagttcgccaactcgctggtgggcgtccagcagcagctgcaggccttcaacacg
taccgcaccgtggagaaaccgcccaagttcacagagaaggggaacctggaggttctgctc
ttcaccatccagagtaagatgagagccaacaaccagaaagttttcacgccacgcgaagga
aagctcatctccgacatcaacaaggcctgggagcgtctggagaaggcggagcatgagcgg
gagctggccctgaggacggagctgatccgccaggagaagctggagcagctggcccgccgc
ttcgaccgcaaggctgccatgagggagacgtggctgagcgagaaccagaggctggtctca
caggataactttggattcgacctgcaggccgtggaggcggccacgaagaagcatgaagcc
atagagacggacatcgcggcgtacgaggagcgcgttcaggcggtggttgccgtggcgagg
gagctggaggcggagagttaccatgacatcaagcgcatcacggccaggaaggacaacgtg
atccggctgtgggagtacctgctggagctgctgaaggcccggcgccacaggttggagctc
aacctgggcctgcagagggttttccaggaaatgctctacatcatggactggatggacgag
atgaagatgctgctgctgtcccaggactatgggaagcacctgctgggtgtggaggatctg
ctgcagaaacacgctctggtggaggccgacatctccatccaggccgaccgcgtccgcaac
gtcaacagcaacgcccagaagttcgccagcgacaccgacggctacaaaccctgcgacccg
caggtcatccgggaccgcgtggcgcacatggagttctgctaccaggagctgaaccagctg
gcggcggagcggcgcgcccgcctggaggagtcccgccgcctctggaagttcttctgggag
atggccgaggaggagggctggatccgggagaaggagcagatcctgtccttggaggatcat
gggaaggatctgacggggacggtgcggctgctgagtcagcacaaagccttcgaggacgag
atgagcggccgcgccgcccacctgcagcagaccatcaggcagggccagcagctggtggac
gacaaccacttcggagccgagaagatcaaggagcgcatccaggacatccaggatcagtgg
gcggctctggagcgtctgtctgccgtacggaaaacccgcctgcaggaggcctgcaacctg
caccagttccaggctgacgccgacgacatcgacacctggatgctggacgtcctgcgcatc
gtctccagcgtggacgtcggccatgacgagttctcggcccaggctctggtgaagaagcac
aaagatgtggcggaggagatcagcagctaccggcccgtcatcgaggcgctgcacgagcag
gcgcagacgctgccgccgcaggatgccggctcccaggaggtccgggcccgactggccggc
atcgaggagcggtaccaggaggtggcggagctgacccggcacaggaagcaggcgctgcag
gacgcgctggcgctctacaagatgctgagcgaggccagcgcctgcgaactgtgggtcgac
gagaaggagcagtggctcaacggcatggacatccctgacaagctggaggacctggaggtg
gtccagcaccggttcgagagtctggagccggagatgaacagccaggcgtctcgcgtcgcc
gtggtgaaccaggtggcccggcagctggtccacagcgggcatcccggggagacccagatc
cgggcccagcaggaccagctcaacaccaggtggagccagttcagagacctggtggaccag
aagaaggagaacctgaactcggcgctgggcgtccagaactaccacctggagtgcaacgag
accaagtcctggatcaaggagaagaccaaggtgattgagtcgacccaggagctgggcaac
gacctggccggggtcatggcgctgcagaggaagctgaccggcatggagcgcgacctggcc
gccatcgaggacaagctgacggacctggacaaggaggcggagcgcctggccagcgaacac
ccggagcaggccggcgccatcaggggccggctggccgagatcaccgccgtctgggacgac
atgaaggggacgctgaagaaccgcgaggagtctctgggcgaggccagcaagctgcagcag
ttcctgcgggagctggatgacttccagtcgtggctgtcccgcactcagacggccatcgcc
tcggaggacaagcccaacgcgctggccgaggccgagaagctgctggcccagcacgagaac
atcaagaacgagatccgcaattatgaggaggactaccagaagatgagggacatgggggac
atggtgacgcagggccagacggacgcccagtacatgttcctgcggcagcggctgcaggcg
ctcgacaccggctggaacgagctgcacaagatgtgggagaaccggcagagcctgctgtcc
cagtcccacgcctaccagctgttcctgagggacaccaagcaggctgaggccttcctcaac
aaccaggagtacgtcctggcccacaccgagatgcccgccaccctggaggccgccgaggcc
gccatcaagaagcaggaggacttcatgaccaccatggacgccagcgaggaaaagatcagc
ggcgtggtcgacaccgggcgccgcctggtcgccgacggcaacattaacggcgagcgcatc
caggagaaggtggactccatcgaccagagacacaagaagaaccggcaggcggcgaaggat
ctgctgagcaggctgaaggacaacagggacctgcagaagttcctgcaggactgccaagag
ctgtccctgtggatcaacgagaagatgctgacggctcaggacatgacgtacgacgaggcc
aggaacctgcacagcaagtggctgaagcaccaggccttcatggccgagctgcagtccaac
aaggagtggctggacaagatcgaaaaggacggccaggcgctgatggcagagaagccagag
acggaggccatggtgaaggagaagctggcgtccctgaaggtcatgtgggacgaccttgag
tcgaccacccagaccaaggccaagtgtctgtttgacgccaacaaggccgagcttttcacc
cagagctgcgccgacctggacaagtggctgaccggcctggacagccagctgcagtccgac
gactttggcaaagacctgacctccgtcaacatcatgctgaagaagcagcagatgctggag
agccaggtggaggtgcgtcagaaggaggtggaggagctgcagaagcagtcgcaggcgctg
agccaggaggggaaaggttctgacgaggtggacgggaagcggatcaccgtggagaacaag
ttccagacgctgctggcgccgctcaagatgaggcgcgacaacctgatggcgtctcgcgag
atccaccagttcaaccgagacgtggaggacgagatcctgtgggtggaggagcggctgcct
ctggccacgtccaccgaccacggacacaacctgcagacggtgcagctgctcatcaagaag
aaccagacgctgcagaaggagatccagggccaccagcctcgttttgacgacatctttgag
cgaagccagcaggtcctgcgggccggcagccccacggccgagccgatccggcagaggctc
accgagctgcaggcgctgtgggagcggatccggaaggagacggagaaccggcattcccgc
ctcagcgaggcccacgaggcccagcagtactactttgatgctgcggaggccgaggcctgg
atgagcgaacaggagctgtacatgatgtctgaggagaaggccaaggatgagcagagctcg
gtggccatgctgaaaaagcatcagatcctggagcaggcggtggaggattacgccgacgcc
gtccatcagctgtccagcaccagccggggtctggtggccgcaggacaccccgacagcgag
cgcatcggcatgcggcagtcgcaggtggacaagctgtacgcggggctgaaggacctggcg
gaggagcggcgcgggaagctggacgaacgtttccgcctgttccagctgaaccgggaggtg
gacgacctggagcagtggatcgccgagagggaggtggtggccgggtcgcacgagctgggc
caggactacgagcacgtcacgatgctgcaggagcgtttccgagagttcgcccgcgacacg
gggaacatcggtcaggagcgcgtcgacggcgtcaacaagctggcggacgagctgatcaac
gcgggccacggcgacgcggccaccatcgccgagtggaaggacgggctgaacgaggcctgg
gccgacctgctggagctcatcgacacgcgcacgcagatcctggccgcctcctacgagctg
cacaagttctaccacgacgccaaggagatcctgcaccgcatcctggacaaacacaagaag
ctgccggaggagctgggccgcgaccagaacaccgtggagacgctgcagaggatgcacacc
accttcgagcacgacatccaggcactgggcacgcaggtccggcagctgcaggaagacgcc
gtccgtctgcagtcggcgtacgccggagacaaagccgacgacatccagaagagagaagga
gaggtgctggaggcctggaagaacctcctggaggcggcggaggcccggcgctccaagctg
ctggacacggccgataagttccggttcttcagcatggtgcgggacctgatgctgtggatg
gacgacgtcatccggctcatcgaggcccaggagaagcccagggacgtgtcgtcggtggag
ctgctgatgaacaaccaccagggcatcaaggcggagatcgacgcccgaaacgacagcttc
acggcctgcatcgagctgggcaaggcgctgctggccaggaagcactacgcggcagaggag
atcaaggagaagttgctccagctgacggataagaggaaagagatgatcgataagtgggag
gaccgctgggagtggctgaggctggtgctggaggtgcaccagttctcgcgggacgcgggc
gtggcggaggcgtggctcctgggccaggagccgtacctgtccagccgggagatgggccag
agcgtggacgaggtggagaagctcatcaaacgccacgaggccttcgagaagtccgccgcc
acctgggaggaacgcttcgccgcgctggagaggctgaccacgatggagttactggaagtg
agaagaaggcaagaggaagaggagaggaagaggcagccggcagaggctgctgaggctgca
gcccagagcagggagggcgagccggtgtcccagaacgggctgccgtccgaccaggagtcg
ccccgggagaacgtggacgaggcggtgaacggggtgtcggagcgcagccccgcggggtcg
cccggcgccgcccgtaaggccaagcccagccaggcggcgacgctgccggctaagagccag
caggacggcgccacctctctgctggaggccttcctgcaccgcaaacacgagtgggagggt
cacaacaagaaggcctccaacaggtcctggcacaatgtgttctgtgtgatcaaccagcag
gagatgggtttctataaggaccagaagagcgcggcgcagggcgtcccctaccacagcgag
atccccgtcagcctgaaggaggcgctgtgtgaggtggcgctcgactacaagaagaaaaaa
cacgtcttcaagctcaagctcactgacgggaacgagtatctcttccaagccaaagacgac
gaggagatgaactcctggatctcgaccatcgtggcggccgcgggctccagggtggaagtg
acgcccagcagccacagcacgccggcccccgccgcgcgcgcccagacgctgccggccacc
gtggcggcctccaccgccgagtccagcccgggaaaacgggagaaagacaaggagaaacgc
ttcagcctgttcagcaagaagaagtag
DBGET
integrated database retrieval system
