Xiphophorus maculatus (southern platyfish): 102219180
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Entry
102219180 CDS
T02923
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102219180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102219180
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102219180
Intermediate filaments
Intermediate filament-binding proteins
102219180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
102219180
NCBI-ProteinID:
XP_023183264
Ensembl:
ENSXMAG00000005026
LinkDB
All DBs
Position
22:complement(2721540..2802522)
Genome browser
AA seq
2348 aa
AA seq
DB search
MELQSAPLSPLSPLAPPLDYAGLRTPSPVPGGSGRAPSPSRGAASPGPGFNYNQLEGRFK
QLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKG
RMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVET
EDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLK
KSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVEHPDEKSIITYVVTYYHYFSKMKALKVE
GKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNT
YRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVFTPREGKLISDINKAWERLEKAEHER
ELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEA
IETDIAAYEERVQAVVAVARELEAESYHDIKRITARKDNVIRLWEYLLELLKARRHRLEL
NLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADISIQADRVRN
VNSNAQKFASDTDGYKPCDPQVIRDRVAHMEFCYQELNQLAAERRARLEESRRLWKFFWE
MAEEEGWIREKEQILSLEDHGKDLTGTVRLLSQHKAFEDEMSGRAAHLQQTIRQGQQLVD
DNHFGAEKIKERIQDIQDQWAALERLSAVRKTRLQEACNLHQFQADADDIDTWMLDVLRI
VSSVDVGHDEFSAQALVKKHKDVAEEISSYRPVIEALHEQAQTLPPQDAGSQEVRARLAG
IEERYQEVAELTRHRKQALQDALALYKMLSEASACELWVDEKEQWLNGMDIPDKLEDLEV
VQHRFESLEPEMNSQASRVAVVNQVARQLVHSGHPGETQIRAQQDQLNTRWSQFRDLVDQ
KKENLNSALGVQNYHLECNETKSWIKEKTKVIESTQELGNDLAGVMALQRKLTGMERDLA
AIEDKLTDLDKEAERLASEHPEQAGAIRGRLAEITAVWDDMKGTLKNREESLGEASKLQQ
FLRELDDFQSWLSRTQTAIASEDKPNALAEAEKLLAQHENIKNEIRNYEEDYQKMRDMGD
MVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLN
NQEYVLAHTEMPATLEAAEAAIKKQEDFMTTMDASEEKISGVVDTGRRLVADGNINGERI
QEKVDSIDQRHKKNRQAAKDLLSRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEA
RNLHSKWLKHQAFMAELQSNKEWLDKIEKDGQALMAEKPETEAMVKEKLASLKVMWDDLE
STTQTKAKCLFDANKAELFTQSCADLDKWLTGLDSQLQSDDFGKDLTSVNIMLKKQQMLE
SQVEVRQKEVEELQKQSQALSQEGKGSDEVDGKRITVENKFQTLLAPLKMRRDNLMASRE
IHQFNRDVEDEILWVEERLPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFE
RSQQVLRAGSPTAEPIRQRLTELQALWERIRKETENRHSRLSEAHEAQQYYFDAAEAEAW
MSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADAVHQLSSTSRGLVAAGHPDSE
RIGMRQSQVDKLYAGLKDLAEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELG
QDYEHVTMLQERFREFARDTGNIGQERVDGVNKLADELINAGHGDAATIAEWKDGLNEAW
ADLLELIDTRTQILAASYELHKFYHDAKEILHRILDKHKKLPEELGRDQNTVETLQRMHT
TFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKNLLEAAEARRSKL
LDTADKFRFFSMVRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSF
TACIELGKALLARKHYAAEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFSRDAG
VAEAWLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFAALERLTTMELLEV
RRRQEEEERKRQPAEAAEAAAQSREGEPVSQNGLPSDQESPRENVDEAVNGVSERSPAGS
PGAARKAKPSQAATLPAKSQQDGATSLLEAFLHRKHEWEGHNKKASNRSWHNVFCVINQQ
EMGFYKDQKSAAQGVPYHSEIPVSLKEALCEVALDYKKKKHVFKLKLTDGNEYLFQAKDD
EEMNSWISTIVAAAGSRVEVTPSSHSTPAPAARAQTLPATVAASTAESSPGKREKDKEKR
FSLFSKKK
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcagagcgccccgctgtcccccctctctcccctggcccctcccctggactac
gccgggctccggaccccatccccggtaccgggcgggtcgggccgggcccccagccccagc
aggggggccgccagcccggggcccggcttcaactacaaccagctggagggacggttcaag
cagctgcaagatgagcgtgaagcagtgcagaagaagaccttcactaagtgggtgaactcc
cacctgtccagggtgtcgtgtcggatcacggacctgtacatggacctgagggacggccgg
atgctcatcaagctgctggaggttctgtctggagagaggctgcccaaacccaccaagggc
cgcatgcggatccactgcctggagaacgtggacaaggctctgcagttccttaaggagcag
cgggttcacctggagaacatgggctcccacgacatcgtggacggaaaccaccgcctcacg
ctgggcctcatctggaccatcatcctgcgcttccagatccaggacatcagtgtggagacg
gaggacaacaaggagaagaagtcggctaaagacgctctgctgctctggtgccagatgaag
actgcagggtatccaaacgtcaacatccacaacttcaccaccagctggagagacgggatg
gccttcaacgccctcatccacaaacacagacctgatctgatcgactttgataagctgaag
aagtccaacgctcactacaacctgcagaacgccttcaacctggcagagcaacacctgggg
ctcaccaagctgctggacccggaagacatcagcgttgaacatcctgatgaaaaatccatc
atcacctacgtcgtcacctattaccactacttctccaagatgaaggcgctgaaggtggag
ggcaagaggatcggcaaggttctggacaacgccatcgagacggagaagatgatcgagaag
tacgagtctctggcgtcggacctgctggagtggatcgaacagaccatcatcatcctcaac
aacaggaagttcgccaactcgctggtgggcgtccagcagcagctgcaggccttcaacacg
taccgcaccgtggagaaaccgcccaagttcacagagaaggggaacctggaggttctgctc
ttcaccatccagagtaagatgagagccaacaaccagaaagttttcacgccacgcgaagga
aagctcatctccgacatcaacaaggcctgggagcgtctggagaaggcggagcatgagcgg
gagctggccctgaggacggagctgatccgccaggagaagctggagcagctggcccgccgc
ttcgaccgcaaggctgccatgagggagacgtggctgagcgagaaccagaggctggtctca
caggataactttggattcgacctgcaggccgtggaggcggccacgaagaagcatgaagcc
atagagacggacatcgcggcgtacgaggagcgcgttcaggcggtggttgccgtggcgagg
gagctggaggcggagagttaccatgacatcaagcgcatcacggccaggaaggacaacgtg
atccggctgtgggagtacctgctggagctgctgaaggcccggcgccacaggttggagctc
aacctgggcctgcagagggttttccaggaaatgctctacatcatggactggatggacgag
atgaagatgctgctgctgtcccaggactatgggaagcacctgctgggtgtggaggatctg
ctgcagaaacacgctctggtggaggccgacatctccatccaggccgaccgcgtccgcaac
gtcaacagcaacgcccagaagttcgccagcgacaccgacggctacaaaccctgcgacccg
caggtcatccgggaccgcgtggcgcacatggagttctgctaccaggagctgaaccagctg
gcggcggagcggcgcgcccgcctggaggagtcccgccgcctctggaagttcttctgggag
atggccgaggaggagggctggatccgggagaaggagcagatcctgtccttggaggatcat
gggaaggatctgacggggacggtgcggctgctgagtcagcacaaagccttcgaggacgag
atgagcggccgcgccgcccacctgcagcagaccatcaggcagggccagcagctggtggac
gacaaccacttcggagccgagaagatcaaggagcgcatccaggacatccaggatcagtgg
gcggctctggagcgtctgtctgccgtacggaaaacccgcctgcaggaggcctgcaacctg
caccagttccaggctgacgccgacgacatcgacacctggatgctggacgtcctgcgcatc
gtctccagcgtggacgtcggccatgacgagttctcggcccaggctctggtgaagaagcac
aaagatgtggcggaggagatcagcagctaccggcccgtcatcgaggcgctgcacgagcag
gcgcagacgctgccgccgcaggatgccggctcccaggaggtccgggcccgactggccggc
atcgaggagcggtaccaggaggtggcggagctgacccggcacaggaagcaggcgctgcag
gacgcgctggcgctctacaagatgctgagcgaggccagcgcctgcgaactgtgggtcgac
gagaaggagcagtggctcaacggcatggacatccctgacaagctggaggacctggaggtg
gtccagcaccggttcgagagtctggagccggagatgaacagccaggcgtctcgcgtcgcc
gtggtgaaccaggtggcccggcagctggtccacagcgggcatcccggggagacccagatc
cgggcccagcaggaccagctcaacaccaggtggagccagttcagagacctggtggaccag
aagaaggagaacctgaactcggcgctgggcgtccagaactaccacctggagtgcaacgag
accaagtcctggatcaaggagaagaccaaggtgattgagtcgacccaggagctgggcaac
gacctggccggggtcatggcgctgcagaggaagctgaccggcatggagcgcgacctggcc
gccatcgaggacaagctgacggacctggacaaggaggcggagcgcctggccagcgaacac
ccggagcaggccggcgccatcaggggccggctggccgagatcaccgccgtctgggacgac
atgaaggggacgctgaagaaccgcgaggagtctctgggcgaggccagcaagctgcagcag
ttcctgcgggagctggatgacttccagtcgtggctgtcccgcactcagacggccatcgcc
tcggaggacaagcccaacgcgctggccgaggccgagaagctgctggcccagcacgagaac
atcaagaacgagatccgcaattatgaggaggactaccagaagatgagggacatgggggac
atggtgacgcagggccagacggacgcccagtacatgttcctgcggcagcggctgcaggcg
ctcgacaccggctggaacgagctgcacaagatgtgggagaaccggcagagcctgctgtcc
cagtcccacgcctaccagctgttcctgagggacaccaagcaggctgaggccttcctcaac
aaccaggagtacgtcctggcccacaccgagatgcccgccaccctggaggccgccgaggcc
gccatcaagaagcaggaggacttcatgaccaccatggacgccagcgaggaaaagatcagc
ggcgtggtcgacaccgggcgccgcctggtcgccgacggcaacattaacggcgagcgcatc
caggagaaggtggactccatcgaccagagacacaagaagaaccggcaggcggcgaaggat
ctgctgagcaggctgaaggacaacagggacctgcagaagttcctgcaggactgccaagag
ctgtccctgtggatcaacgagaagatgctgacggctcaggacatgacgtacgacgaggcc
aggaacctgcacagcaagtggctgaagcaccaggccttcatggccgagctgcagtccaac
aaggagtggctggacaagatcgaaaaggacggccaggcgctgatggcagagaagccagag
acggaggccatggtgaaggagaagctggcgtccctgaaggtcatgtgggacgaccttgag
tcgaccacccagaccaaggccaagtgtctgtttgacgccaacaaggccgagcttttcacc
cagagctgcgccgacctggacaagtggctgaccggcctggacagccagctgcagtccgac
gactttggcaaagacctgacctccgtcaacatcatgctgaagaagcagcagatgctggag
agccaggtggaggtgcgtcagaaggaggtggaggagctgcagaagcagtcgcaggcgctg
agccaggaggggaaaggttctgacgaggtggacgggaagcggatcaccgtggagaacaag
ttccagacgctgctggcgccgctcaagatgaggcgcgacaacctgatggcgtctcgcgag
atccaccagttcaaccgagacgtggaggacgagatcctgtgggtggaggagcggctgcct
ctggccacgtccaccgaccacggacacaacctgcagacggtgcagctgctcatcaagaag
aaccagacgctgcagaaggagatccagggccaccagcctcgttttgacgacatctttgag
cgaagccagcaggtcctgcgggccggcagccccacggccgagccgatccggcagaggctc
accgagctgcaggcgctgtgggagcggatccggaaggagacggagaaccggcattcccgc
ctcagcgaggcccacgaggcccagcagtactactttgatgctgcggaggccgaggcctgg
atgagcgaacaggagctgtacatgatgtctgaggagaaggccaaggatgagcagagctcg
gtggccatgctgaaaaagcatcagatcctggagcaggcggtggaggattacgccgacgcc
gtccatcagctgtccagcaccagccggggtctggtggccgcaggacaccccgacagcgag
cgcatcggcatgcggcagtcgcaggtggacaagctgtacgcggggctgaaggacctggcg
gaggagcggcgcgggaagctggacgaacgtttccgcctgttccagctgaaccgggaggtg
gacgacctggagcagtggatcgccgagagggaggtggtggccgggtcgcacgagctgggc
caggactacgagcacgtcacgatgctgcaggagcgtttccgagagttcgcccgcgacacg
gggaacatcggtcaggagcgcgtcgacggcgtcaacaagctggcggacgagctgatcaac
gcgggccacggcgacgcggccaccatcgccgagtggaaggacgggctgaacgaggcctgg
gccgacctgctggagctcatcgacacgcgcacgcagatcctggccgcctcctacgagctg
cacaagttctaccacgacgccaaggagatcctgcaccgcatcctggacaaacacaagaag
ctgccggaggagctgggccgcgaccagaacaccgtggagacgctgcagaggatgcacacc
accttcgagcacgacatccaggcactgggcacgcaggtccggcagctgcaggaagacgcc
gtccgtctgcagtcggcgtacgccggagacaaagccgacgacatccagaagagagaagga
gaggtgctggaggcctggaagaacctcctggaggcggcggaggcccggcgctccaagctg
ctggacacggccgataagttccggttcttcagcatggtgcgggacctgatgctgtggatg
gacgacgtcatccggctcatcgaggcccaggagaagcccagggacgtgtcgtcggtggag
ctgctgatgaacaaccaccagggcatcaaggcggagatcgacgcccgaaacgacagcttc
acggcctgcatcgagctgggcaaggcgctgctggccaggaagcactacgcggcagaggag
atcaaggagaagttgctccagctgacggataagaggaaagagatgatcgataagtgggag
gaccgctgggagtggctgaggctggtgctggaggtgcaccagttctcgcgggacgcgggc
gtggcggaggcgtggctcctgggccaggagccgtacctgtccagccgggagatgggccag
agcgtggacgaggtggagaagctcatcaaacgccacgaggccttcgagaagtccgccgcc
acctgggaggaacgcttcgccgcgctggagaggctgaccacgatggagttactggaagtg
agaagaaggcaagaggaagaggagaggaagaggcagccggcagaggctgctgaggctgca
gcccagagcagggagggcgagccggtgtcccagaacgggctgccgtccgaccaggagtcg
ccccgggagaacgtggacgaggcggtgaacggggtgtcggagcgcagccccgcggggtcg
cccggcgccgcccgtaaggccaagcccagccaggcggcgacgctgccggctaagagccag
caggacggcgccacctctctgctggaggccttcctgcaccgcaaacacgagtgggagggt
cacaacaagaaggcctccaacaggtcctggcacaatgtgttctgtgtgatcaaccagcag
gagatgggtttctataaggaccagaagagcgcggcgcagggcgtcccctaccacagcgag
atccccgtcagcctgaaggaggcgctgtgtgaggtggcgctcgactacaagaagaaaaaa
cacgtcttcaagctcaagctcactgacgggaacgagtatctcttccaagccaaagacgac
gaggagatgaactcctggatctcgaccatcgtggcggccgcgggctccagggtggaagtg
acgcccagcagccacagcacgccggcccccgccgcgcgcgcccagacgctgccggccacc
gtggcggcctccaccgccgagtccagcccgggaaaacgggagaaagacaaggagaaacgc
ttcagcctgttcagcaagaagaagtag
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integrated database retrieval system
