Xiphophorus maculatus (southern platyfish): 102219219
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Entry
102219219 CDS
T02923
Name
(RefSeq) polycomb protein SCMH1-like isoform X3
KO
K11465
sex comb on midleg-like protein 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102219219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102219219
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
102219219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
RBR
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
102219219
NCBI-ProteinID:
XP_014324505
Ensembl:
ENSXMAG00000002002
UniProt:
M3ZIF9
LinkDB
All DBs
Position
4:complement(23779474..23806182)
Genome browser
AA seq
683 aa
AA seq
DB search
MGRTPQRDPKEEKKERRSSITAGSALDKSNEPFSWEDYLRETSSVAASPSCFKQSRIPPS
NDFKAGMKLEARDPRNSNSVCIATVMGMMGTRLRLRLDGSDNTNDFWRLVDSSDIQPIGT
CERTGDMLQPPLGFRMNASSWPMFLLRTLSGAEIAPASAFKKEPASADKNYFQPGMKLEA
VDRKNPYLICPATVGEVRGLEIFVMFDGWRGAFDYWCPFDSRDIFPVGWCALTKHSLQPP
GNFFTLPGALLAPVSSTSATRRSSFNSSSSSTSMQTSYRLPNPLPPLPVRKGVRGRRPKS
QTIALLKAAAEAAAAAAAAVNGAPQSPVTETSLAPRPHKKRGPKPKGKKKPLMGQSPGSS
PVTTPPPEIKLNPSHVSVDSNLSNGSNVICTVCVYVNKHGNYGPHLDRKLVQQLPDHFGP
APVNAVLQQAVQACVDCTYQPSVLLSFLQSQSHSGGEVIRVCSEHGIRYVKLPSASSASS
VLRFLENMCQHLESDSLFSSQPFNPYSNSTRFYNRTKSEPLSITENGVSNDNPTKDPTPS
PRPLHNTLDYRAAKRERPCYPGHTQTPPPLRRVSSNPPELGPVNTHRRVEAASSTTGPDH
MKQDRETSGNNASSWSVDEVIRFVQEADPQTLGPHVDLFRKHEIDGKALMLLRSDVIMKY
MGLKLGPALKLCHHIEKLRQTKH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggacggacaccacaaagagatccaaaagaggagaagaaggagaggcggagcagcatc
acagcaggctctgccctcgacaaatcaaacgaaccgtttagctgggaagactatctgaga
gaaacctcatctgttgcagcatcaccttcttgcttcaaacagtctagaatccccccttcc
aatgatttcaaagctggtatgaagcttgaggctcgagaccctcgcaactctaactcggtg
tgcatcgccacggtgatgggcatgatggggactcgcctgcgactacgactggatggcagt
gacaacactaatgacttctggcggcttgtggactcttcggacatccagccaataggaact
tgtgaaaggactggagacatgctgcagccgcccctcggtttcaggatgaatgcatcctca
tggcccatgtttctcctgcggacgctaagcggtgcagagatagcccccgcctctgctttt
aagaaggagccagccagcgcagataaaaactacttccagcccggcatgaagctggaggct
gtggacaggaaaaacccctacctgatctgtcccgccacggtgggagaggtccgaggcctt
gagatttttgtaatgtttgatggctggcgaggtgccttcgactactggtgccccttcgac
tccagagacatcttccctgttggttggtgtgccctgacgaagcacagcttacagccacca
ggaaacttctttactcttcctggtgcacttctcgctccggtttcttccacatctgcaaca
cgtcgctcctctttcaactcctcctcatcctcgacctccatgcagacctcataccgactg
ccaaatcccctgccacccctccccgtccgcaagggtgtccgaggtcgccgtccaaaatcc
cagaccattgctttactgaaagcagcggctgaggcggcggcagcggcggcagcggctgtg
aatggagcaccgcagagcccagtgactgagacttcactggcccctagaccacacaagaag
agaggaccgaagcctaaaggcaagaagaaacctctgatggggcaatccccaggctcatct
ccagttactaccccgcctccagagatcaaactgaaccccagccacgtctctgtggacagc
aacctcagcaacggctcaaatgtaatttgcacagtgtgtgtctatgtcaacaaacatggc
aactatggcccacatctagatcgaaaactggtccagcagctgccggaccactttggtcca
gctccggtcaacgcagtccttcagcaggctgttcaggcctgtgtggactgtacgtatcag
ccctcggtgctgttgtcttttctacagagccagtcccactcgggaggagaggtcattaga
gtttgctcagagcatggcattcgctatgtgaagttgccctcggcctccagtgcgtcgtct
gtgttgcggttcttggaaaacatgtgccaacacctggagagcgacagtcttttcagctcg
cagccctttaacccctacagcaacagcacacgcttctacaacagaaccaagtcagaacca
ctgtccatcactgagaatggcgtttccaatgacaatccaacaaaggaccccacaccttcc
cctcggccccttcacaacacactggactacagagcagcaaagagggagcggccgtgttat
cctggacacacacaaacaccgccgccccttcggcgagtcagctccaacccccccgagctt
ggtcctgtaaatacacacagacgagtggaagcagctagctcaacaacaggtccagatcac
atgaaacaggacagagaaacttcagggaacaacgcttcctcctggtcagttgatgaggtc
ataagatttgtccaagaggcggatccacaaactcttggtccgcatgtcgacctgttcagg
aaacatgagatcgacggcaaggctctgatgctgctgcgcagtgatgtcattatgaagtac
atgggactgaagctgggtccggctcttaaactgtgtcatcacatcgagaagctgagacag
accaagcattga
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