Xiphophorus maculatus (southern platyfish): 102219302
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Entry
102219302 CDS
T02923
Symbol
myom1
Name
(RefSeq) myomesin-1 isoform X3
KO
K24495
myomesin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102219302 (myom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102219302 (myom1)
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
102219302 (myom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Ig_J_second
C2-set_3
Ig_CD22
C2-set_2
Motif
Other DBs
NCBI-GeneID:
102219302
NCBI-ProteinID:
XP_014324076
Ensembl:
ENSXMAG00000002124
LinkDB
All DBs
Position
21:7647831..7675306
Genome browser
AA seq
1461 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRSYRSTEAESKMRHYQSSSRYSAGTSLSSSSRGLKVSSHSGLEE
NRLSPLPKRSKPSYLALDKENQIIGYVVPIFRGSQEFATGLSDTEEARVRDTAAYMARRD
LFTSGLEMERSEVISRKEAMRESAERISLNKRIHEHEEHFKRMNEDSLMHTPEFVIKPRS
HTVWEKQCVRLHCTVSGWPDPRVIWYKNNVAIDPLANPGKFKLESRYNVHSLEINKCDFD
DTAQYRVSAMNSQGEQSAFASVVVKRFKGEIDETLPVPRLGPVSEYGITFQIHIVDTFGV
SFGREGETMSLGCTVIIYPALHRYQPEVQWYRDDVLLSPSKWTHMHWSGDRATLTLTHLN
KEDEGLYTLRVATKSGYETYSAYAFVKDADAEVEGAPGAPLDVRCLDANKDYIIVTWKQP
AVEGGNAILGYFVDRCEVGTTHWVQCNDTPVKFARFPVTGLVEGRSYIFRVRAVNKTGIS
HPSRVSEPVAAMDPADRARMRGTSAPWTGQIIVTEEEPAEGIVPGRPRELQVTEATKNYV
VLSWKPPGEKGLEGVMYYVEKCVSGTDNWQRVNTEIPVKSPRFALFDLAEGKSYLFRVRC
CNSAGVGEPSEPTEAITVGDKLDIPSAPGKVVPTRNTDTSVVVSWEASKDVKDLVGYYIE
CSIVGSDVWEPCNNKPVRATRFICHGLITGEQYVFRVRAVNAAGLSQFSPISEPVEVKAA
IASPAPPYGITVLECVRDAMVLSWKQPTFIGGADITGYFVDYREVVDGVPGKWHEANVKA
VSERAYRVSELRENRKYQFQVRAANMAGVGIPSMPSNTFLCEEWTIAVPGPPHDLQVLEV
RSDSLVLLWKPPVYQGRDPVNGFYVDIKEGDAPGEAWRGVNTKAAEKTYLKVKDLKEGQT
YVLRVRAQNKAGVGKTSDATEPVLALTKPGTKEIVVEVDDDGVISLNFECSNLTPDSKFV
WSKDYEEITDSSRLTTETKGNKSKTVFNSPGEEDIGVYSCLVTHTDGASSSYTLSEEELK
RLLEVSHDHKFPIIPLKSDLAVELQEKGRVRFWLQAAQMSANGKVDYVFNDNVLSQGDKY
KMNFDKNTGVIEMFMESLTPQDEGTYTFQLNDGKATNQSSLVLIGDVFKQLQKESEFQRK
EWFRKQGPHFIEGLSWEVTPECCVILKCKVGNIKKDTSALWHKDGHQIKADEQLGFTEGV
LKLEIAQISRKDSGVYEVVLKDERGKDTSTLNLTDQGFKDLMNEVFSFIANSSTPLKITS
TDEGIRLYTFVSIYNDLLQVTWHYKDSAISFSDRIKSGVVGEQLWLQITEPTEKDMGKYA
IEFYDGKGGLRRTVELSGQAFDDAFAEFQRLKAAAIAERNRARVAGGLPDVVTIQEGKAL
NLTCNISGNPVPEVTWLKNDREITSDEHCILKFESGKFASFTITGVNTSDSGKYSILVKN
KFGTESGDFTVSVFIPESGKK
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatcaatacccttctaccagaagcaccatcgccactacgaccgtagctaccgt
agcacggaggcagagtctaaaatgaggcactaccagtccagcagcaggtactctgctgga
accagcctgtcctccagcagcaggggacttaaggtgtcttctcactcgggactggaggag
aacagattaagccccttacccaagcgatccaagccatcttacttggctcttgacaaagag
aaccaaatcatcggctatgtagtgcccatcttcaggggcagtcaagagtttgctacggga
ttgtcagacacagaggaggccagagtgagagacacggctgcatacatggcccgcagggac
ttgtttacgagtggtctggagatggagaggtcagaggtgatttccaggaaggaggccatg
cgtgagtcggctgaacgcatctctctgaataaacggatccatgaacacgaggaacacttc
aagaggatgaacgaagacagcctgatgcacaccccggagtttgtgattaaacctcgctcc
cacactgtgtgggagaagcagtgtgtgcggctgcactgcactgtcagcggctggcctgac
cccagggtcatctggtacaaaaacaatgtggcaattgacccacttgccaatcctggcaag
tttaaactggagagcagatacaatgtgcactcgctggagattaacaaatgtgattttgat
gacactgcccagtatcgtgtttctgccatgaattcgcaaggagagcagtctgcatttgcc
tctgtcgttgtcaaaaggttcaaaggtgaaattgatgaaacactgccagtgcccagactc
ggcccagtttccgagtatggcatcacgttccagattcacatcgttgatacgtttggagtg
tcgtttggaagagagggggagaccatgagtttgggctgcacagtaatcatctacccagct
ctccaccgctaccagccggaggttcagtggtacagagatgatgtgctgttgtctccatct
aaatggacccacatgcactggagtggagaccgagccacgttgacactcacccaccttaac
aaggaggacgagggcctgtacactttgcgcgtcgccactaagtctggatacgagacctac
tctgcctatgcgtttgtcaaagatgcagatgcagaggtggaaggtgctcctggagcccca
ctggacgtacgctgtctggatgccaacaaggattacattattgttacctggaagcaacca
gctgttgagggaggaaacgccatcttgggctactttgttgacagatgtgaggttggaaca
actcactgggttcagtgcaatgacactccggtcaagtttgcccgtttccccgtcactggt
ttggtggagggtcgatcctatatcttcagagtccgagctgtcaacaagaccgggatcagc
cacccgtctcgggtctctgaaccggtggcagcaatggatccggccgatcgagcccgcatg
agaggcacttctgcaccctggaccggccaaatcattgtcacagaggaggagcctgcagag
ggcattgttcctggcagacctcgtgagttgcaagtgactgaagcaaccaaaaactatgtg
gtcctgagctggaagcctcctggagagaagggccttgaaggggtcatgtactatgtggag
aagtgtgtctcgggcacagataactggcagagggtgaacacagagatcccagtcaagtct
cctcgcttcgctctgtttgatctcgctgagggaaagtcctacctgttccgtgtccgctgc
tgcaactctgctggtgttggcgaaccgtctgagccaactgaagccatcactgtgggcgac
aagcttgatatcccatcggctccggggaaagtcgtccccaccagaaacacagacacatcc
gtcgtggtgagctgggaggcgtctaaggatgtcaaagatttggtggggtactacattgag
tgtagtattgttgggagcgatgtgtgggagccatgcaacaacaagcctgttagggcaaca
aggttcatctgccatgggttgattactggagagcagtacgtgttcagggtgagggctgtg
aacgccgcagggctcagccagttctccccaatatcagaaccagtggaagtaaaagctgcg
attgcttctcctgctccaccctatggcatcacagttctggagtgtgtgcgcgatgccatg
gtgctctcttggaagcagccgactttcattggaggagctgacatcaccggctattttgta
gattaccgcgaggtcgttgatggcgtgccggggaaatggcacgaggccaacgtgaaggct
gtgagcgagagggcctacagggtgtcggagctgcgggaaaacagaaagtatcagttccag
gtgcgagctgccaacatggcgggcgtcgggatcccatcgatgcccagtaacaccttcctg
tgcgaggagtggaccattgctgtaccaggacctcctcacgatctgcaggttttagaggtg
cgtagcgactccctggtgttgctgtggaaacctcctgtgtaccagggccgcgatccggtc
aacggtttctacgtagacatcaaggaaggagatgcaccaggggaagcctggaggggcgtc
aacaccaaggctgcagagaaaacgtacctcaaggttaaggatcttaaggaaggacaaacg
tatgtgctgagagtgcgtgctcagaataaagccggtgtgggcaaaacctcagatgctaca
gagccagtcctagctctgaccaaacctggcactaaggagatagtcgtggaagtcgatgat
gatggtgtcatctccctgaattttgaatgctctaacttgacgcccgactccaaatttgtg
tggtccaaggattatgaagaaatcacagactccagtcgcctgaccacagagaccaaggga
aacaaatccaaaaccgttttcaacagtcctggggaggaggacattggtgtttactcatgt
cttgtcacccatactgatggtgcttcatccagctacactctctctgaagaagagctaaag
aggctgctggaggtcagtcacgaccacaaatttccgattattccactgaagtcagacctg
gcagtcgagttacaggagaagggcagagtgcgcttctggctgcaggcggcgcaaatgtca
gcaaacggcaaagtggattacgttttcaacgataacgttctctcccagggagataaatac
aaaatgaactttgacaagaacaccggtgttattgagatgttcatggagtctctgactcct
caagatgaagggacttacactttccagctgaacgacggaaaagcaacaaatcagtccagc
ttggtgctgataggtgatgtgttcaagcagctgcagaaagaatcagagtttcagagaaag
gaatggttcagaaagcaaggtcctcattttattgaaggcttgagttgggaggtaacgcca
gagtgctgcgtgatactcaagtgcaaggttggcaacataaagaaggatacctcggctctg
tggcacaaagacggacatcagatcaaagccgatgagcaactcggcttcacagagggagtt
ctcaaactggaaattgcccagatttccagaaaggattctggtgtgtatgaggttgttcta
aaggatgagagaggaaaggacacatccacactgaatctgacagatcaaggtttcaaagac
ttgatgaatgaagttttcagctttattgctaattcctccactccactgaagatcacaagc
acagatgagggaattcgactctacacatttgtcagcatctacaacgacttgctccaagtc
acatggcactacaaggactcggcgatctccttctctgaccgtataaagagcggggtggtt
ggagaacagctgtggcttcagatcacagagcccacagagaaagacatgggaaaatatgcc
atagagttttacgatggaaagggcggtctcaggagaacagtggaactctctggtcaagca
tttgatgatgcttttgcagaatttcagagactcaaagctgcagctattgcagagagaaat
cgtgctcgagtggcaggaggcctaccagacgtggtgactatacaggagggcaaggctctc
aatctcacctgcaacatttcgggcaacccggtgccagaggtcacctggctgaagaacgac
agggagatcacctccgatgagcattgcatcctgaagttcgagtcgggcaagttcgccagc
ttcaccatcaccggcgtgaacacgtcggactccggcaagtacagcattctggtgaagaac
aagttcggcacagagagcggcgacttcaccgtaagtgtgttcatcccggagtcaggcaag
aaatag
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integrated database retrieval system
