Xiphophorus maculatus (southern platyfish): 102219471
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Entry
102219471 CDS
T02923
Symbol
dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X2
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
xma03012
]
102219471 (dhx57)
Enzymes [BR:
xma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102219471 (dhx57)
Translation factors [BR:
xma03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102219471 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
HA2_C
DEAD
HA2_N
zf-CCCH_4
AAA_22
zf_CCCH_4
zf-CCCH
nSTAND3
NB-ARC
Torus
AAA_19
NPHP3_N
AAA_14
Viral_helicase1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
102219471
NCBI-ProteinID:
XP_014331543
Ensembl:
ENSXMAG00000004136
LinkDB
All DBs
Position
17:complement(13046486..13057703)
Genome browser
AA seq
1428 aa
AA seq
DB search
MNAKRRGGKPNRGGGRFNKPRGGGGGGGGSRKGGGAGRWDDDDDDFSLDFGPSRSSRPGK
GRGGIGGAGGGGRGRGRDAGRGRGFNDRRRDSKGDRKPLPRSLVSTRVPLKAGDGSRPEA
SSMPLQRIFMTNENQEQLKELLRELQTQDFDEPYEESGSDYSQEEGEEYDELDPREEGQF
WVTNDEPVERDESPAYYPEEEEEEEEDKERPTPEPVISLFAVGKLCRYGFDRERSKQALE
SGGGEFGSTLEHLLLQVFSERYGQKAVSPDGLQGVPMDECLSQRQEEALALAAIFGDRFY
ERIANAVWTVSLDVSFLSDKPARNGGDAAGKNSRNVCKFYLKDRGCRFGDKCRFRHELPG
RERSGAGSLDPKGPSQPGFTSYSPPEYELEVRFPKGNRYPHQAPIVAFSTNDESVAAAGR
LGVTEKLFGEALAAAKSGEPVVYTLITLCEDELSMKELLAVGHHKYSTPPPVVAPQPNPL
GIAKSRTSSTNSRRAAPPATQKPAEIKATGEAEEPEEEAEVEAEVEVEAVPVEAESYVNL
RKKMESKHSQKTENLLQENGKLCRDFQRKRSSRRFKSMLEQRRNLPAWQEKENILDELDS
CQVLVISGMTGCGKTTQIPQFILDASLAGPAGQVANIICTQPRRISAISVAQRVAQERAE
CLGNSVGYQIRLESVRTPATRLLYCTTGVLLRRLEGDADLRGVSHVIVDEVHERTEESDF
LLLVLKDLITKRQDLKIILMSATLNANLFSEYFYDCPTIHIPGRTFPVDQFFLEDAVAKT
GYVIEDGSPYLRSGKQNSSSASSQRVTRDTVDDLGDDVWNFMSFCKKDFVKDSTPDQQLS
LQELTIRYKDTKKSVLKTIAAMDLDKINMDLVESLLEWIVDGQHNYPPGAVLVFMPGLAE
IKMLYEQLQSNRIFNNRRTTRCVVYPLHSTLSNEEQQAVFSRPPEGVTKIIISTNIAETS
VTIDDVVYVIDSGKMKEKRYDASKSMESLEDSWVSRANALQRKGRAGRVASGVCFHLFTS
HCFRHQLAEQQLPEIQRVPLEQLCLRIKILDLFAEQQLESVFSRLIEPPAEGSQDAARQR
LQDLGALTPDEKLTPLGYHLACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVS
PWDKREEASEKKLGFAVANSDHLALLQAYKGWCCAAKSGNQAGFRYCRENFLSWRSLQEI
ASLKRQFAELLSDIGFIKEGLRARVIERLSSQGADGVLEATGPEANLNSENIRLMSAMLC
AALYPNVVQVRAPQGNYKMTSKGAMKMQPKANELRFMTKSDGCVHIHPSSVNYTVRHYGS
PYLVYHEKVKTSRVFIRDCSMVSVYPLVLFGGGQVNVELHKGEFVISLDDGWIRFAAASH
QVAELVKELRWELDQLLEDKIRNPSMDLCSCPRGSRIIRMIVHLITTQ
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaagagaagaggagggaagccaaacagaggaggagggaggtttaacaagccc
agaggaggcggaggtggcggaggtggaagccggaagggaggaggagccggtcgctgggat
gacgacgacgatgatttcagcctcgattttggaccctctcgctccagcagacctggcaaa
ggacgaggcggcatcggtggtgccggcggtggcgggcgtggaagggggagagatgcggga
cgaggacggggatttaatgatcgccgaagggactcgaagggcgacaggaagcccctcccc
aggtcccttgtgagcaccagggtccctctgaaagcaggcgatggcagcaggcccgaggcg
agcagcatgcccttgcagaggatcttcatgaccaatgagaaccaagagcagctcaaggag
ttgctgcgggagctgcagacgcaggattttgacgagccttatgaggagtctggctctgat
tattcacaagaagagggggaggaatatgatgagttggatcctcgtgaggaaggtcagttt
tgggtcactaacgatgagcctgtggagcgagatgagagccctgcttattacccagaggag
gaagaggaagaggaggaagacaaggagcggcccacacctgaacccgttatctccttattt
gctgttgggaagctctgcagatacggcttcgacagggagagaagcaaacaggctctggag
tccggcggaggagaattcgggtcgactttagagcatctcctcctccaggtcttcagcgaa
cgctatggacagaaagcggtttcccccgatggcctccagggggtgccgatggacgaatgc
ctgagccagcgtcaggaggaagccctagcgttggctgccatttttggcgaccgtttctac
gagcgcatcgccaacgccgtgtggacggtgtctctggacgtctccttcctctctgacaaa
ccggcccgaaacggaggcgatgccgcgggcaaaaacagccgcaacgtttgtaaattctac
ctcaaagaccgcggctgccgcttcggcgacaaatgccggttcagacacgagcttccgggt
agagagaggtccggggcgggttccttggacccaaaagggccaagccagcccggcttcacc
agctactctcctcctgagtatgagctggaggtccgcttcccaaagggaaaccgttaccct
caccaggcgccgatagttgccttcagcaccaacgacgagtcggtagcagccgcggggaga
ctcggtgtcaccgagaagctgtttggagaagcactagctgcggcgaagagtggcgagccc
gtcgtttacaccctgatcaccctctgcgaggacgaactcagtatgaaggagcttctggcc
gtcgggcatcacaagtacagcacgccgcctcctgtggtggcaccacaaccgaatcctctc
ggcatcgcaaagagcagaaccagcagcacgaacagcaggagggccgctccaccagcaacc
cagaaacccgcagaaataaaagcgactggagaggctgaggagcctgaggaggaggcagag
gtggaggcagaggtggaggtggaagccgtcccagtggaggctgagagctatgtcaacctg
aggaagaagatggagagcaagcacagtcagaaaactgagaacctcctgcaagaaaacggc
aagctgtgtcgagacttccagagaaaacggtcttcccggcgctttaagtctatgctggag
cagaggaggaacctcccggcttggcaggagaaagagaacatcctggatgagttggacagc
tgtcaggttctggtgatcagcgggatgaccgggtgtggtaagaccactcagattcctcag
ttcatcctggacgcctctctggccggtcccgccggacaggtggccaacatcatctgcacc
cagcctcggcggatttctgccatctctgtggctcagagagtcgcacaggagcgggccgag
tgtctggggaactcggtgggctaccagatccgcctggagagcgtcaggacgccggccacc
cggctgctgtactgcaccacaggcgttctgctcagaagactggagggcgacgcagacctc
agaggagtctcgcacgttattgtggatgaggtgcatgagcggacagaggagagcgacttc
ctgctgttggtgcttaaggatcttattacaaagaggcaagacctgaagattattctaatg
agtgccactctcaatgccaacctcttctctgagtatttctacgactgtcctactatccat
atacccggtcgtacattccctgttgatcagtttttccttgaagatgctgttgctaaaact
ggctacgtcatagaagacggcagcccttacttgcgctcaggaaagcagaactcgtcttcc
gcaagcagccaaagagttacgagggacacggtggacgacttgggcgacgacgtgtggaac
ttcatgtctttctgcaagaaagattttgtcaaagactcgaccccagaccagcagctcagc
ctgcaggagctgaccattagatacaaagacacaaagaaatctgtcctgaaaactattgct
gccatggacctggacaagatcaacatggacttggtggagagcctgctggagtggatagtg
gacggacaacacaactacccaccaggtgctgtgttggtgtttatgccaggccttgctgag
attaaaatgctttatgagcagctgcagtccaacagaatattcaacaacagacgcaccacc
agatgcgtggtctaccccctccactccaccctgtccaacgaggagcagcaggcagtcttc
agccgcccccccgagggcgtcaccaagatcatcatctccaccaatattgcggagacctcg
gtaaccatcgacgacgtggtttatgtcatcgattctggaaagatgaaggaaaagaggtac
gatgcttccaagagcatggagagcctggaggactcgtgggtgtcccgggccaatgcgctg
cagaggaaaggtcgagcgggccgagtggcctcgggggtttgcttccacctcttcaccagc
cactgcttccgccatcagctggccgagcagcagctgcccgagatccagagagttcccctg
gagcagctctgcctgcgaattaagatcctggacttgttcgccgagcagcagctggagtcc
gtcttctctcggctcatcgagccgccggccgaggggagccaggacgccgccaggcagcgc
ctccaggacctgggagctctgaccccggatgagaagctgaccccactgggctaccacctg
gcctgcctgcccgtcgacgtgcgcatcgggaaactcatgctgttcggcgccatcttccgc
tgcctcgacccggcgctcaccatcgcagccagtctggcctttaaatcaccgtttgtgtca
ccatgggataagagagaggaagccagtgagaagaaacttggctttgctgtggccaacagt
gaccatctggctttgttacaggcatacaagggttggtgctgcgctgcaaagagcggtaac
caggccggcttccgctactgtagggagaacttcctgtcctggcgcagtttgcaggaaatc
gccagcctgaagaggcagtttgcagagctgctgtcagacatcggcttcattaaggaggga
ttgagggccagggttattgaacgcttatcctcacagggagcggatggtgttttggaggct
actgggcctgaggccaaccttaactcagaaaacatccgcctgatgtctgcaatgctgtgc
gcagctctctatccaaatgtggtgcaggttcgagctccgcaggggaattacaagatgacc
agcaagggagccatgaagatgcaaccgaaagccaacgagctgcgcttcatgaccaagagc
gacggctgcgtccacatccacccctcgtccgtcaactacacagtgcgtcattacggcagc
ccctacctggtttaccacgagaaggtgaagacgagccgcgtcttcatcagagactgcagc
atggtgtccgtctacccgctggtgctgttcggaggcggtcaggtcaatgtggagctccac
aaaggggagtttgtcatctctctggatgacggctggatccggttcgcagcagcatcgcat
caggtggctgagctggtgaaggagctgcgctgggagctggaccagctgctggaagacaaa
atcaggaacccgagcatggacctgtgcagctgcccccgaggttcccgcatcatccgcatg
atcgtccacctcataaccacccagtaa
DBGET
integrated database retrieval system
