Xiphophorus maculatus (southern platyfish): 102219503
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Entry
102219503 CDS
T02923
Symbol
zc3h12d
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102219503 (zc3h12d)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
102219503 (zc3h12d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
UBA_N4BP1_C
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
102219503
NCBI-ProteinID:
XP_005806093
Ensembl:
ENSXMAG00000005023
UniProt:
M3ZS32
LinkDB
All DBs
Position
15:21984581..21996003
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AA seq
538 aa
AA seq
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MDRQQHAKVERFLKLGYAHTDILRVLESLHHDAQTNDILEELIKTCHTRSTSVPNSPKLV
PRGCSPSPGPSKARTGPDRESNTGFRPVVIDGSNVAMSHGDKKVFSCQGLQLAVNWFWDK
GLRHITVFVPLWRKEQPRPEAPITDQHILHELERRKILVYTPSRCVNGKRVVCYDDRYII
KLAVEYDGIIVSNDNYRDLQTENPQWKKFIEERLLMYTFANDKFMPPDDPLGRNGPTIDD
FLRKKPWTQDNKQQHCPYGKKCTYGIKCKFYHPERVNQSQLAVADELRALAHQPEHRYTP
PTPPYGSRDDLTHSDPAICYRESSNLRSQLNKSPLFYQYSSSDADEAFSSMGSSMSRLSI
QDLPYSLEPPLTSYSSGRGSYQMSGSYAGNSLRLSPNGHSYYPPQNGSMPCESHMYSQCR
CGHQNPANHHHHHHHQQQQQQQRQPAWSSCPAVPAHSGADMQYRHTSLSRDPWVQQPSAP
ISQSRSVSSEQRNGLRSQLSTLFPQSMVEQVLNAHPHVSDTLELIGLIQSYRTSNMSF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccagcagcacgccaaagtggaacgctttctcaagttgggatacgctcacacc
gacatcctcagggtgctggagagcctgcaccacgacgcccagaccaacgacatcctggag
gagctcatcaagacctgccacactcgcagcaccagcgtacccaacagtcccaagctggtg
cccagaggctgcagccccagccccggccccagcaaggccaggaccggccctgacagagag
tcgaacacaggcttcagacccgtggttatagacggcagcaacgtggccatgagccatggt
gacaagaaggtgttttcgtgccaaggcctccagctggcggtgaactggttttgggacaaa
gggctgcgtcacatcaccgtgtttgtgcccctgtggaggaaggagcaaccgcggcctgag
gcgcccatcacagatcaacatattctccatgaactggagcggagaaagatcctggtgtac
acaccgtcccgctgtgtcaacggcaagagggtggtgtgttatgatgaccgctacatcatc
aagctggcagttgaatatgacggaatcatcgtgtccaacgacaactaccgtgacctgcag
acggagaatccccagtggaaaaagtttattgaggagagactcctaatgtacacatttgcc
aacgacaagttcatgcctccggatgatcccctgggtagaaacggtcccaccattgatgac
ttcctcaggaagaagccatggacacaggacaacaagcagcagcactgtccatatggaaag
aaatgtacttatgggataaagtgcaagttctaccatccagagagggtgaaccagtcacag
ctggctgtagcagatgaactgagggctctggcacatcaacctgaacacagatacactccg
cccacccctccctacggaagcagagacgacctgactcacagcgaccccgccatctgttac
agggagagcagcaacctgagaagccagctaaacaaaagtcctcttttttaccagtactcc
agctccgatgcagacgaggccttcagctccatgggtagctccatgtccaggctcagcatc
caggacctgccctacagcctggagccccctctgaccagctacagcagcggcagaggcagc
taccaaatgtccggctcgtacgccgggaacagcctgaggctttcacccaatggacacagt
tactaccctccccagaacggctctatgccctgtgagagtcacatgtacagccagtgcagg
tgtggccaccaaaacccggccaaccatcaccaccatcaccaccaccagcagcagcagcag
cagcagcgccagccggcgtggagctcctgccccgctgtgcctgcacacagcggggcagac
atgcagtaccggcataccagcctgtccagagacccctgggtgcagcagcccagcgccccc
attagccagagcagaagcgtgtccagtgagcagaggaacggcctgcggagtcagctgagc
acgctcttccctcagagcatggtggagcaggtcctgaacgcccacccccacgtctcagac
acgctggaactgatcggactcatccagagctacaggaccagcaacatgtccttctag
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