Xiphophorus maculatus (southern platyfish): 102219593
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Entry
102219593 CDS
T02923
Name
(RefSeq) unconventional myosin-Va-like isoform X1
KO
K10357
myosin V
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102219593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102219593
04131 Membrane trafficking [BR:
xma04131
]
102219593
03029 Mitochondrial biogenesis [BR:
xma03029
]
102219593
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102219593
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
102219593
mRNA cycle factors
P-body specific factors
102219593
Membrane trafficking [BR:
xma04131
]
Others
Actin-binding proteins
Myosins
102219593
Mitochondrial biogenesis [BR:
xma03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
102219593
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
102219593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
Myosin_N
Motif
Other DBs
NCBI-GeneID:
102219593
NCBI-ProteinID:
XP_014328339
Ensembl:
ENSXMAG00000006730
LinkDB
All DBs
Position
2:6912353..6936174
Genome browser
AA seq
1821 aa
AA seq
DB search
MAAFELYSKNAHVWLPDAAEVWKSAELLKDYSPGDLTLSLQLEDGTVVEHNVDPKTKNLP
PLRNPNILVGENDLTTLSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPIYE
ADIINAYSGQNMGDMDPHIFAVAEEAYKQMARDQINQSIIVSGESGAGKTVSAKYAMRYF
ATVSSSSEETNVEKRVLASNPIMEAFGNAKTTRNDNSSRFGKYIEIGFNEDHCIVGANMR
TYLLEKSRVVFQAHGERNYHIFYQLCASSHLSEFKAFKLGCADDFCYTNQGQGPVIDGVN
DAKEMCNTRRAFSLLGIGESDQVRIYQILSAILHLSNVDVKDQSSDTCSILPDNAHLMVF
CELMGVPCEEMAHWLCHRKLQTITETFVKPVSKENAVHGRDALAKHIYARLFGWIVNNIN
NALESTVKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
EIPWTLIDFCDNKPCINLIEAKLGILDLLDEECRMPKGSDDTWAQKLYNTHLKQNAYFDK
PRLSNEAFIIHHFADKVEYQCVGFLEKNKDTVNEEQINVLKKSKFGLLPKLFEDEEKIKA
PTSKISSNTGRPGKSQKEHKKTVGLQFRQSLYLLMDTLNATSPHYVRCIKPNDRKAPFTL
DPIRAVQQLRACGVLETIRISAAGFPSRWTYQEFFGRYRVLMKQEDVLPDRKQTCRNLLE
KLIKDQQKYQFGKNKIFFRAGQVAYLEKLRSDRLRSACVAIQKTIRCWLARKKYLRMRES
AIMIQKHVRAQQARSYVKFLRQTKAAIVIQRNVRMWSKKRRFLQQRSAAVTVQRVWRGYL
ARKHYFKLLHEQKAVVIQRMARGWLARQRFRRAMEAVVLLQSCVRRMSAKKELKKLKVEA
RSVEHFKNLNIGMENKIMQLQHKINEQHKENRELTERLSVLEKTHTTEREKQCREIENLR
SSEQEARAKAEKVPSLLEQLSFLQEELENTRREKEHQEEQTKIYKEQTQQKIHELNMKNS
LLNNNLEELNEEFSIQAQQLAEIKTNLENTKQLEKDFTEERSRYQSLLSKHLQLEERHKD
LKEEMNVTIISNQSSHQRTDSNYSSNSSEFSQILSSTEDEDSAIQAEDEVETKVDLPILL
KLQKRVKELEGENRSLWKKLDKKEEAQQEKAKELEMQTTFGRTELDVEKLKRQELESENK
KLKQNLNELRKSLTSENSDLAPPAAGTLSYNILLEQLSSSNEELELRKEEVLLLRSHMVR
QEALKHKDSVLGESVKLDLGEIHSLQDSDRSTNIHTLNEDGELWLAYEGLKETNRLLETQ
MQEQECLHNEKYRKLNEEMNKLRAEKEHQQKLLAVSLLLPEDARIDASLKHEITRLTTEN
LERMEQQQKQDKTIRKLKKQLKLYMKKVEDLEANAHQTVSSSGTSMPVRPVHIARKEKEF
QGMLEFKEDDTGHLLKNLVIDLKPRGVAVSFTPGLPAFIIFMCLRYADNVNDDRRLSTLL
NSTISSIKGVIKRKGNDFEVVSFWLANTCRLMHCLKQYSGDEVFMVHNTAKQNEQCLANF
ELTEYHQLFGDLAIQIYRQIIKSMENILLPLIIPCMLEHEAEQGVLGSKPTGLRKRSPSF
PDEALTVEVLLQRLSFFHTTMSQHGMDPDIIKQVVKQQFYIISAVTLNNLLLRKDMCSWG
KGLQIRYNVWQLDEWLGEKELSDCGAKETLEPLIQAAQLLQINKNTEADAKAICSMCSSL
TTAQIVKILTLYTPVIEFEERVSNTFITTIKNLLKDRAESSNLMMDAKKIFSVTFPFTPS
SVALETVQIPASLNLGFLTRV
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttttgaactttactccaagaatgcccatgtttggctcccagatgcagcagaa
gtgtggaagtctgctgagcttctcaaagactacagtcctggtgacctgacgctgtctcta
caactggaggatggcacggttgtggagcacaatgttgaccccaaaaccaaaaacctgccc
cctctcagaaaccccaacatcctggtgggagaaaatgacctcacaactctcagttacctc
catgagccagcagtgctacacaaccttaaagtgcgctttattgactccaagctgatttac
acctactgtggaatcgtcctggttgccatcaatccctatgagagtctgcccatctatgaa
gctgatatcatcaacgcctacagtgggcaaaacatgggagacatggacccacatatcttt
gcagtagctgaggaagcatacaaacaaatggccagagatcaaataaatcagtccataata
gtcagcggggagtctggtgcaggcaaaacggtttctgctaaatacgccatgcgttacttc
gccacagtcagcagctcatcggaggagaccaacgttgagaagagagttcttgcttctaat
ccaatcatggaggcctttgggaatgccaagacaacaagaaatgacaacagcagccgcttt
gggaagtacattgagatcgggtttaacgaggatcactgcatagtcggggctaacatgagg
acctacttactggaaaagtctagagtagtgtttcaggctcacggagaaagaaactaccat
attttttaccagctatgtgcctcttcacatctgtctgagtttaaggccttcaaattaggc
tgtgcagatgacttctgctacactaaccagggtcagggtccagtcatcgatggagtcaat
gatgccaaagagatgtgcaacaccaggagggcgttctcactattaggaattggtgaaagt
gatcaagtgagaatttaccagattctttcagctattctccatcttagcaacgtggatgta
aaagatcagtcatctgacacatgcagcatcctgccagataatgcccacctgatggtcttc
tgtgagctcatgggagttccttgtgaagaaatggcccactggttatgccataggaaactc
cagacgatcacggaaacctttgtgaagcctgtttccaaagagaatgcggtccatggaagg
gatgcactggccaaacatatttatgccagactcttcggctggatcgtgaacaacattaac
aatgcgctggaatctacagtgaaacaacactcatttatcggtgtgctcgacatttatggg
tttgagacatttgatgtcaacagctttgagcagttttgtatcaactatgccaatgaaaag
cttcagcagcagttcaacctgcatgtcttcaagctggagcaagaagagtacatgaaggag
gagattccctggacgttgatcgacttctgtgacaacaagccgtgcattaatctcatcgag
gccaagcttggcatcctggaccttctggacgaggagtgcagaatgcccaaaggttctgac
gacacatgggctcagaaactgtacaacacccacctgaagcagaatgcttattttgataaa
cccaggttatcaaacgaagctttcatcattcaccactttgctgacaaggtggagtaccag
tgtgtcggattcctggagaaaaataaggacactgtcaacgaggaacagattaatgtgctt
aaaaagagcaagtttggtttgctgccgaaactgtttgaggatgaagaaaaaataaaagcg
ccaactagcaagatttctagtaacactggaagacctgggaagtctcaaaaggaacataag
aaaactgtcggactgcagtttcgacagtctctatacttgcttatggacacactaaatgca
acatcgcctcattatgtgcgctgcatcaaaccgaatgaccgtaaagctccattcactctg
gacccaataagagccgtgcagcagcttcgagcatgtggcgtcctggaaacgatccgtatc
tctgcagcaggattcccatctagatggacctatcaggaatttttcggtcgttatcgggtc
ctgatgaaacaagaggatgttctgcctgatagaaaacaaacctgcagaaaccttctggaa
aaacttatcaaggaccaacagaagtaccagtttggcaaaaacaagatcttcttcagggct
ggccaggtggcttacctggagaagctgcgttcggacagactgcgttcagcttgtgtcgcc
atccagaagacaatccgctgctggcttgctcgcaaaaagtatctgaggatgagagagtcc
gccatcatgattcagaagcatgtacgggctcagcaggcacgcagttatgtcaagtttctg
cggcagaccaaagcagctattgttattcagcgcaacgtgcgaatgtggtctaaaaagaga
cgtttcctgcagcagcgctctgcagctgtcactgttcagcgtgtttggaggggctatttg
gctaggaagcattacttcaagttgctgcatgagcagaaggctgtggtgattcagaggatg
gcgagaggctggttggccaggcagcgtttccggcgcgcaatggaggccgtcgtcctgctg
cagagctgtgtgcgccgcatgagtgccaagaaagaattgaagaagctaaaagtggaggca
cgctcagtggagcacttcaagaacctcaacattgggatggagaacaagatcatgcagtta
cagcacaagataaacgagcaacacaaagaaaacagagagctcacagagaggctcagtgtt
ctggagaagacccacactactgagagggagaaacagtgcagagagatagaaaacctgcgc
tcttcagagcaggaggccagagccaaagcagagaaggttccctcgctgctggagcagctg
tccttccttcaggaggagctggaaaacacccgcagagagaaggagcaccaggaggagcag
acaaagatctacaaagagcaaacgcaacagaaaatccatgaactgaatatgaagaacagc
ttgttaaataacaacttagaagaactaaacgaggaattctccatacaagctcagcagttg
gcagaaattaaaaccaacttggagaacaccaaacagctggagaaagactttacagaagag
cgctctcgctaccaaagtctcctcagcaagcatctgcagctggaggaacggcacaaggac
ctcaaggaggagatgaacgtcaccataatttcaaaccagtctagtcaccagaggacagac
tccaactacagcagtaactcatctgagttttctcaaatcctgagctccactgaagatgaa
gacagcgccattcaagcagaggatgaggtcgagactaaagtggacctgcccattcttcta
aagctccagaaaagggtgaaggagctagagggagaaaatcgatctttatggaaaaagctg
gataaaaaagaggaggcccaacaagaaaaggcaaaagaactggagatgcagacaactttt
ggcaggacagaactggacgtagaaaaattgaagcggcaagagctggagtctgaaaacaag
aaactgaagcagaatctgaatgagctgcggaagtctctaaccagcgagaatagcgatttg
gcgccccctgctgctggtactttgtcttataacattctgctggaacaactcagttcttcc
aacgaggagctggagctgcgtaaagaggaggtgttgctcctccgttcacatatggttcgt
caggaagctcttaaacacaaggattctgtacttggagaaagtgtgaaactggatctcggt
gaaatccactcattacaagattctgacaggtccactaatattcataccctgaatgaagat
ggagagctgtggcttgcttatgaaggcttgaaagagacaaataggcttctggagacccag
atgcaggagcaggagtgtcttcacaatgagaagtacaggaagctgaatgaggagatgaac
aaactgagggctgaaaaggagcatcaacaaaagctgctggctgtgagcctgcttctaccc
gaagatgcccgaatagacgcaagcctgaagcacgagataacacgactcaccactgagaat
ctggaacgaatggaacaacaacagaaacaagataaaacaatacgcaaattgaaaaaacaa
cttaagctctatatgaaaaaagtggaagatttagaagcgaacgctcaccagacagttagc
tcttctgggacaagcatgcctgtccgaccggtgcacatcgcacgcaaggagaaggagttc
cagggcatgttggagttcaaggaggacgacacgggtcatttgctgaagaacctggtcata
gatctgaagcctcgtggcgtcgcagtcagcttcactccagggcttcctgccttcatcatc
ttcatgtgccttcgatatgcagacaatgtgaacgacgacaggagactcagcactctcctc
aattctacaatcagcagcatcaaaggcgtcatcaagagaaaaggaaatgattttgaagtg
gtgtcgttctggctggccaacacgtgccggttaatgcactgtctgaagcagtacagtgga
gatgaggtgtttatggtgcacaacactgctaagcagaatgagcaatgcctggctaatttt
gagctgacagagtaccatcagctttttggtgacctggccattcaaatctaccgtcagatc
atcaaaagcatggagaacatcctgctacccctgataataccatgcatgctggagcatgag
gcagagcagggagttttaggctccaaaccaacaggcctgaggaagaggagccccagcttc
cctgatgaagctttgacagtggaagtcctcctgcaacgtctcagcttcttccacaccacc
atgagtcaacacgggatggaccctgacatcatcaaacaggtggtcaaacagcagttttac
atcatcagcgccgttactcttaacaatctgctgctgaggaaagacatgtgctcgtggggt
aaaggcctacagatcaggtacaacgtttggcagctggatgagtggctgggagagaaggag
ctgagcgactgtggagcgaaggaaactctggagcctctcattcaggctgcacagctttta
cagatcaataaaaacactgaagctgatgccaaagcaatctgtagcatgtgctcctccctc
accacagcacagattgttaaaatcctgacgttgtacactccagtgattgagtttgaagaa
agagtatcaaacacattcatcaccaccattaaaaaccttttgaaagacagagctgagtcg
tccaacttgatgatggacgccaagaaaatattctccgtcacattcccgttcacgccttcc
tctgtggctctggagaccgtccagatccccgcaagcctcaacctgggcttccttacacgt
gtctag
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integrated database retrieval system
