Xiphophorus maculatus (southern platyfish): 102219928
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Entry
102219928 CDS
T02923
Symbol
gdf6
Name
(RefSeq) growth/differentiation factor 6
KO
K20012
growth differentiation factor 6
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04060
Cytokine-cytokine receptor interaction
xma04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102219928 (gdf6)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
102219928 (gdf6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xma04052
]
102219928 (gdf6)
Cytokines and neuropeptides [BR:
xma04052
]
Cytokines
Transforming growth factors (RSTK binding)
102219928 (gdf6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Herpes_IE2_3
DUF3330
Motif
Other DBs
NCBI-GeneID:
102219928
NCBI-ProteinID:
XP_023186361
UniProt:
A0A3B5R6S4
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Position
3:26764572..26773008
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AA seq
418 aa
AA seq
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MDASRFAAVHLGLVLVLFGNVPCFQSAAIISPSAPRRHREARTSHPHGQRSPRLFRDVVA
SSHPAAGRHKDGEVPKDAVVPHEYMLSIYRTYSAAEKLGLNASFFRSSKSANTITSFVDK
GTDNLLHSPLRRQKYLFDVSTLSEKEELVGAELRIFRKALGAPQAAGPFHLQLYPCRSDK
PLDSRSLDAADSAETGGWEVLDVWDAFQTQRQHRSQLCFQLRAARGRSDDEVDLRRLGLD
RSGRGQQEKAILVAYTRSRKRENLFNEMKEKIKSRRSAEEKPARAEGPGQGPPRRRRRTA
PNNRHGKRHGKKSKYRCSKKALHVNFKELGWDDWIIAPLGYEAYHCEGVCDFPLRSHLEP
TNHAIIQTLMNSMDPNSTPPSCCVPTKLSPISILFTDSGNNVVYKQYEEMVVEQCGCR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatctcggttcgctgcggtacatctgggcctggtcctcgttctgtttgggaat
gtaccgtgtttccagtctgctgctatcatctccccctctgcgccgaggaggcacagggaa
gccaggacctctcatccgcacggacaaaggtcacccaggctcttcagagacgtcgtcgcc
tcctcgcacccggcggcgggacgccacaaagacggagaggtcccaaaggacgccgtggtc
ccgcacgagtacatgctctccatatacaggacgtattcggcggcggagaaactcggacta
aacgcgagcttcttccgctcctcaaagtctgccaacaccatcacgagttttgtggacaaa
ggaacagacaatcttttgcactctcctctgagaagacagaagtatctgtttgatgtctca
accctgtccgagaaagaggagctggtcggagccgaattaaggatatttagaaaagctttg
ggggcccctcaggcggcggggcccttccacctccagctctacccgtgccgctccgacaag
ccgctggactccaggtctctggacgccgcggactccgccgagaccggcggctgggaggtt
ctggacgtgtgggacgcgttccagacgcagcgccagcacaggagccagctctgcttccag
ctccgggccgcgcgcggcaggtccgacgacgaggtggacctgaggcggctgggcctggac
aggagcggccgcgggcagcaggagaaggccatcctggtggcctacacccgctccaggaag
agggagaacctgttcaacgagatgaaggagaagatcaagtcgcggcggtcggccgaggag
aagccagcgagggcagaggggccgggccagggccccccgcggcggcgccggaggacggcg
ccgaacaaccggcacgggaagcggcacgggaagaagtccaagtacaggtgcagcaagaag
gctctgcacgtgaacttcaaggagctgggctgggacgactggatcatcgccccgctgggc
tacgaggcctaccactgcgagggcgtgtgcgacttcccgctgcgctcgcacctggagccc
accaaccacgccatcatccagaccctcatgaactccatggaccccaacagcaccccgccc
agctgctgcgtgcccaccaagctcagccccatcagcatcctgttcacggactcgggcaac
aacgtggtgtacaagcagtacgaggagatggtggtggagcagtgcggctgcaggtag
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