Xiphophorus maculatus (southern platyfish): 102219953
Help
Entry
102219953 CDS
T02923
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102219953 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xma03009
]
102219953 (utp15)
Ribosome biogenesis [BR:
xma03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102219953 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
WD40_RFWD3
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IFT122_2nd
Beta-prop_NWD2_C
baeRF_family11
DUF7099
Motif
Other DBs
NCBI-GeneID:
102219953
NCBI-ProteinID:
XP_005795059
Ensembl:
ENSXMAG00000014206
UniProt:
M4AIF5
LinkDB
All DBs
Position
12:complement(10363874..10371927)
Genome browser
AA seq
528 aa
AA seq
DB search
MASFKPTKIPVYPKLGEKVTQDTLYWKNYKAPVQIKEFGAVSNIDFSPVAPHNFAVTAFT
RVHLYGPFSQEPVKTFTRFKDTAYCGRFRSDGQLLVAGCEDSVVRLFDVSGKVALRMFKG
HTKAVHVTDFTSDRYQILTGSDDYTCRLWDIPNAAELSTYQEHTDYIRCGVTSKLNRDLF
ITGSYDHTLKVFDARAEKSAITMDHGQPVESLLLYPSEGLLVSAGGRYVKVWDLLKGGQP
LVSLKNHHKTVTCLALGNNGERLLSASLDRHVKVYNTTTYKVVHNFDYAAAILSLALAPD
DESIVVGMTNSILSIKHRKHTEESKEIMSQQRRRPSYRVFVKGKNYVPKPDDYLVSKPVK
EHLAKYDKELKKFNVSKALDAALEVWLRRKKPEITVGVIKELDRRGTLKNALAGRDEKQL
SQLLHFVIGNIVDTRFAPVLLTAAEMILDIYKSVIGQSALIDQQLLRLQNILESEINLER
ELLEVLGMLDAMFATSITRKEVPYSDVGRSNGLAQGEASSSRPELQVT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttaaacccacaaaaatcccagtgtatccaaagctcggagaaaaagtcaca
caggacactctttactggaaaaactacaaggctcctgtccagataaaagaatttggagca
gtctcaaacatcgacttctctcctgtggctcctcataattttgctgtgactgccttcaca
agagtccacctctatgggcccttctctcaagagcctgtcaaaacatttacccgattcaag
gacactgcgtattgtggaagattcaggtcagatggccagctgctcgtggcgggatgcgaa
gactcggttgtcagactttttgatgtcagcggcaaggtggcactaaggatgttcaaaggg
cacacaaaggccgtacatgtcactgacttcacctcagaccgttatcagatcctcacggga
tctgacgactacacctgccgactgtgggacatcccaaacgcagccgagctcagcacctac
caggaacacacagactacattcgctgtggtgttaccagcaaactcaacagagatctcttc
attactggatcatatgaccacactctgaaagtgtttgatgccagagcggagaagagtgcg
attaccatggatcatggacagccagtggagagcctcctcctctacccctctgagggactc
ctcgtctcagcaggtgggcgctacgtcaaagtgtgggatctgctaaaaggaggtcaacct
ctggtgtcgctgaaaaaccatcataaaaccgtcacctgtttggctctcggcaacaatgga
gagagactgctgtcggcatctctggacaggcatgtgaaagtctacaacacaaccacgtac
aaagtggtccacaactttgactacgctgctgcaatcctcagtttggctttggctccggat
gacgagtccattgttgtgggaatgaccaacagtattttaagcatcaaacacagaaaacac
actgaagagtcaaaggaaataatgagccaacagagacgccgcccttcatatcgtgtcttt
gtgaaaggaaaaaattatgtcccaaaaccagacgactatcttgtcagtaagccagtcaaa
gaacatttggccaaatatgacaaggagctcaagaaatttaatgtatccaaagctttggat
gcagccttggaggtgtggttaagaaggaaaaagccagagataactgtgggtgtaatcaag
gagctggaccgaagaggaactctaaagaatgcgctagcaggaagagatgaaaagcaactc
tctcagttactccactttgtcattggaaacattgtcgacaccaggtttgcccccgtcctt
ttgacggcagctgaaatgatccttgatatctataaatcggtgattggccagtcggcactg
atcgaccagcagctgctgcgcctacagaacatcctggagtcagagatcaacttggagcgg
gagctactggaggtcctgggaatgttggacgccatgttcgccacctccatcactcgtaag
gaggtgccgtactccgacgtgggaagatctaatgggctggctcagggagaggcgagcagt
tcgagacccgagcttcaggtcacttga
DBGET
integrated database retrieval system
