Xiphophorus maculatus (southern platyfish): 102219970
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Entry
102219970 CDS
T02923
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X2
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102219970 (usb1)
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
102219970 (usb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
2_5_RNA_ligase2
Motif
Other DBs
NCBI-GeneID:
102219970
NCBI-ProteinID:
XP_005796402
Ensembl:
ENSXMAG00000015219
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All DBs
Position
2:complement(18019032..18024341)
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AA seq
278 aa
AA seq
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MLVGYSSSSEEDSEPGSEARSRNSRRSVEEDEGTRDLPTKKKARTEELDPKTRLPLPGCL
LSMFPDDDDEALTEDSSLHGGRIRSFKHERGNWATYVYLPYPPEEEFEELLEELLSALGA
HGLMLTQQEEFHLSLSQTVVLRHHWIQPFTQSLQSGLSQCGRFACSAATLKVYCNAERTR
TFLGMEVSTGHAQLLDLVRVVDKTMIEFQLDTFYKEPSFHVSLAWCVGDQTEKMKELLQE
LQIMVDDREEGPFLLRLDCVEVRCRTGNKTFRFSLKTS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgttggttggttacagcagcagctctgaggaggacagtgaacccggaagtgaagcgagg
agtcgaaatagccgaagatcagtggaggaagatgagggaacccgagaccttccaaccaag
aagaaagccagaaccgaggagctggatcctaaaacgagactgcctctgcccggttgcctc
ctgagcatgttccctgatgacgacgatgaagcactgactgaagacagctcccttcatggt
ggacgcatccgctccttcaagcacgagagaggaaattgggccacttatgtttatctgcct
taccctcctgaggaggaatttgaggagcttttagaggagttgctgtcagccttgggggct
catggtctgatgctgacgcagcaggaggagttccacctgagtctgtctcagacggtggtg
ctcaggcaccactggatccagccatttacacaaagcctccagtcgggcctttctcaatgc
ggaaggtttgcgtgttcagcagcaacgctgaaggtctactgcaacgctgagaggacaagg
accttcttggggatggaagtgtccaccggtcatgctcagttgttggatctggtccgagtt
gtcgacaaaacaatgatcgagtttcaattggacactttttataaggaaccatctttccac
gtgagtctggcctggtgtgtgggagaccagacggagaagatgaaggaactcttacaggag
ctgcagattatggtagatgatcgtgaagaagggccgtttctgttgaggttggactgtgta
gaagttcgctgcaggacaggaaacaagacttttcgtttctcactaaagacctcgtga
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