Xiphophorus maculatus (southern platyfish): 102220008
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Entry
102220008 CDS
T02923
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xma03032
]
102220008 (rtel1)
Enzymes [BR:
xma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102220008 (rtel1)
DNA replication proteins [BR:
xma03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102220008 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
102220008
NCBI-ProteinID:
XP_023194957
Ensembl:
ENSXMAG00000004603
LinkDB
All DBs
Position
1:complement(5704392..5725580)
Genome browser
AA seq
1165 aa
AA seq
DB search
MPSLNLRGVTVNFPFTPYECQKDYMSKVLQCLQEKVNGVLESPTGTGKTLCLLCATLAWR
EHFRDSISARRLADKLKGQELFPNTPLASWGTAATDGDKPTYYTDIPKIIYASRTHSQLA
QVINELKNTSYRPKVCVLGSREQLCINQEVMRQESNHIKVHMCRGKVSTRSCQYYNNVDE
KSTDRDLVNSILDVEDLVKFGNKQRVCPYYLSRSLKQQADVIFMPYNYLLDPKSRRAHNI
ELNGAVVIFDEAHNVEKTCEESTSFDLTPYDIASAITAVDRLLVEQAREVSQGGSVTEDH
NVESLSSGSKIDINTIAKIKKILLDLEAAIDSYEVPSDKGITKPGIFIYELLERAHLTYR
TKTEIHDALEQIIGSLAGLPGIFLSTAGLQKLVDMIQLVFCGEASDKDKQKQMEFNTAHF
KVHIHLDNSYQRKRQTPDLWSAPSSKKQGNVLSYWCFSPGFSMQDLVNQDIRCVILTSGT
LSPLTSFTSEMRIKFPVLLENGHVIDRDQIFVSVIDRGPDGVHLSSAFDRRFNPDNMTSL
GNTVANLSRVVPHGLLVFFPSFPLMEKTLEFWRANGHTDRIENMKPMFVEPKGKGTFNEV
IDGYYNKVNDPVSKGGSFFAVCRGKASEGLDFADTFGRGVIITGLPFPPKFDPRVILKMQ
FLDEMSRKKSPGMRYLSGQEWYKQQAFRAVNQAIGRVIRHKEDYGAIFLCDQRFKSSDAR
AQLPSWVKPYVRLYDRFGNIVRDVSQFFRVAQKIRPVVVKMPALENLPTECSSNTPSFSS
GSASESYHTQKAKALDAHLPSLKRRKLDEQSRANGVAKLCLAYQSEVQENQRKPTNLLDA
LERGDRCWEDGKNNVGEEKAGRFSTLSLQYDKKMEDELRGGKRKIKLIQEQKTSVSEDGS
EESKASRAKQFLADMKKSLSKVSFDHIVQALQSYKKTDDLSVLLTETAVLVEDPNTHSLF
RGFYQFVRPHHKKTFDEKCQELVGQGCGFKPEHSLSKEKKAEILQTDHSAVGAVSSRSTC
SQLDTQQLNRGGPYLSQQGLRAAPSGSDHKNEIHAAFLADVKQALGPERSAQLFQAIHGY
KKTDNYDSLVATVVSLFTERDENFHLLIRFGVFVRPHHKKQYKEMLDALIGQPVSCPAVS
EEQPSAAPLSPPLKTQSKISSFFSK
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactgaatctgagaggagtgacagtaaatttccccttcactccgtacgagtgt
cagaaagactacatgagcaaagtgttgcaatgtttgcaggagaaagttaatggggttctg
gagagtcctacaggaactggcaaaactctgtgtctgctgtgtgccactcttgcatggagg
gagcacttcagggactccatctctgctcgcaggctggcagacaagctgaaaggacaggag
ttgttcccaaacacacctctggcttcctgggggacagctgctactgacggggacaagcca
acctactacactgatattcccaagatcatctacgcttccaggactcattcacagctcgca
caggttatcaatgagttaaagaatacgtcatacaggccaaaggtgtgtgtgctggggtca
agagagcagctgtgtatcaaccaggaagtaatgcgtcaggagagcaaccacatcaaggtt
catatgtgcagaggaaaggtgtccaccaggtcatgtcaatactacaacaatgttgacgag
aagagcacagacagagacttggttaactctatccttgatgtggaggacttggtcaaattt
ggcaacaaacaaagggtctgtccgtactacctcagtcgttctctaaagcagcaagctgat
gtcattttcatgccatacaactatctgctggatccaaaaagccgcagggctcacaatatt
gagctgaatggagccgtggtgatttttgacgaagctcacaatgtggagaagacgtgtgaa
gaatcgacgtcctttgacctgactccatacgatatcgcttctgccatcactgctgtggac
cggctgctggtggagcaggctagagaagtcagccaaggaggctctgttacagaagaccac
aatgtagagtccctcagctcaggttcaaaaatagatataaatacaatcgctaaaatcaaa
aaaatactgctggatttggaagctgccattgattcgtatgaagttccaagtgacaaaggc
atcacaaaaccaggaatcttcatctatgagctgctggagagagcccatctgacctatagg
accaagacagagatccatgacgctttggagcagatcattggaagcttggctggactgcca
ggaattttcctcagtacggctggactgcagaaactggttgatatgatacagttggtgttc
tgtggggaagcatcggataaggacaaacagaagcagatggagttcaacacagcccatttt
aaggttcacatccatcttgacaacagctaccagagaaaaagacagacccctgatttgtgg
tctgctccttcttcaaagaaacaaggcaacgtcctgagttactggtgcttctcccctggc
ttcagcatgcaggacctggtgaatcaagacattcgctgtgttattctgaccagtggcacc
ctctctcccctgacctctttcacctctgagatgaggataaaatttccggtgcttctcgaa
aatggccatgtgatcgatcgagaccagatctttgtgagcgttattgatcgaggtccagat
ggagttcacctgagttcagcattcgatcgaaggtttaatcctgataacatgacttcttta
ggaaacactgtagccaaccttagccgggtggttcctcatggcctcttggtgttttttcct
tccttccctttgatggagaaaactctggagttttggagggccaacggacacacggatcgc
atcgagaacatgaagcccatgtttgttgaacccaaagggaagggaacctttaacgaggtt
attgatgggtattacaacaaagtgaatgacccagtgtctaaaggaggaagcttctttgcc
gtctgccgtgggaaggctagtgaaggtttggattttgcagacacctttggccggggcgtc
atcatcaccggcctgccgtttcctcctaagtttgacccacgagtcatcctgaagatgcag
tttctggacgaaatgagcagaaaaaaatctccaggaatgaggtacctgtcaggtcaggag
tggtacaaacagcaggccttcagagcagtgaaccaggccatcgggagagttatccgccac
aaggaggactacggagccatctttctctgtgatcaaaggtttaaaagctctgatgccaga
gctcagctcccatcctgggtcaagccgtacgttcgcctctacgacagatttgggaacatt
gtccgtgatgtgtctcagttctttcgggttgcacagaaaataaggcctgttgtggtgaag
atgcctgcactagaaaaccttccaaccgaatgctcatcaaacactcccagtttttcctcc
ggctctgcctctgaaagttaccacacccagaaagcaaaggcgctggatgcacaccttccc
agcctcaagagaagaaaactggatgagcagagcagagctaacggagtggctaagctctgc
ctcgcctatcagagtgaggtgcaggaaaatcagaggaaaccaaccaacctgctggacgct
ttggagagaggtgaccggtgctgggaggatggcaagaacaatgtcggagaggagaaggcc
ggccgcttctccaccttgtccctccaatacgacaagaagatggaggacgagttgcgggga
gggaagcggaaaatcaagctgattcaggaacagaaaacgagtgtctctgaggatgggtca
gaggagagtaaggccagcagggccaaacagttcctggccgacatgaagaagtctctgagc
aaggtgagcttcgaccacatcgtccaggctctgcagagctacaagaagacagacgacctg
agcgtcctgctgacagagacggctgttttggttgaagaccccaacactcacagcctgttc
cgagggttctaccagtttgttcgtccacatcacaaaaagacgtttgatgagaaatgtcag
gagctggtgggtcagggctgtgggttcaaaccggagcactcgctgtctaaggagaagaaa
gctgagattctgcagactgatcactcagcggtgggagctgtgagctccaggtccacatgc
agtcagctcgacactcagcagctcaacagaggaggaccctacctgagccagcagggatta
agagcagctccatctggttctgaccataagaacgagatccacgctgccttcctggccgac
gtgaagcaagccctgggacctgaaaggtccgcccagctcttccaggccatccacggctac
aagaagacggacaactacgacagcctggtggccaccgtggtgagcttattcacagagagg
gatgagaacttccacctcctcatcaggtttggtgtgtttgttcgccctcaccataagaag
caatacaaagagatgctggatgctctgattggtcagcccgtgtcatgtcctgctgtgagt
gaggagcagccctctgcagctcctctctcaccacctctgaagactcaaagcaagatttcc
agttttttctccaagtga
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integrated database retrieval system
