Xiphophorus maculatus (southern platyfish): 102220167
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Entry
102220167 CDS
T02923
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102220167 (ttc28)
Cilium and associated proteins [BR:
xma03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
102220167 (ttc28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_16
TPR_SusR
RPN7
TPR_11
TPR_17
DUF6340
TPR_BSK1_C
TPR_14
TPR_NPHP3
TPR_9
TPR_19
TPR_6
PUB
TPR_YpiA_C
HlyE
AP4E_app_platf
BTAD
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
102220167
NCBI-ProteinID:
XP_023199314
LinkDB
All DBs
Position
12:complement(23677016..23906156)
Genome browser
AA seq
2479 aa
AA seq
DB search
MEKQATLKEKFSVFGSRTARRPIRCVAVDDGSRCALSKAEFMEKVRQSNEACQRGDFQEA
VCLYGDALQADPQNCILYSNRSAAFLKLGQHQAALEDAEKACGLNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRDSLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTAGHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSLGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQCH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPELQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVTGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVSGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLAIARDTQDRLLEGDASCGLGAVYQAMGEYETALRCHQSDLEIAEEAGSTTRQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVSEGGSDFQ
DGGGGGMVSSSSLEQHIASAREALGVESYYSRGCSSSETESEAGDFLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSSLPRRSSNLGKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIH
GLGFSAKTHSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPTAEEEALMVAELLG
CQPLTGSSATKERVMGALTQAECAHFATHISWKLAALVLTPNPECVPGGAGATVGVGTIG
RGVSSRRGSSGRGRKGSVGSGYTIPESLNMQDDSSDVESICDSPPLQEFLLTAADILDLR
LPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKVFVHAFYSA
LLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYP
DRARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSA
GTGIPAAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASEAGEQLINRAVKN
MVAMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVV
LKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPVGYSSL
PFSPPCLDNQASDAISVYSLSSVTSSMSFASKSDCDFLSHRQRGGATAHFTVHKHPHVPR
SRSSPQGAAAAGAGTRGDEEEYEGFSIISSEPLGSHCDSLPLPPGHSQRHHRGGRGVSGS
TGAGRGYTVSVSSRGSVSTPTSPVKTSLVPSPNSPFQKVGKVSSSDTGESDQSSTETDST
VKSQEEKPVHLDPQELAQKILEETHSHLRAVSSLQRVGAEGGTGPAAASARSGTFRSSET
SAFSRPNSSASGRAQSSPKPKPPSRSSSLQKVSSGYNSPAVSESSQKDGSHPSPTMDSHA
QFKLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSACSTSADAPDLDR
LRRGVIDEKVQAIHNLKTFWTNAAAQQQQHLGPVKAIHSKSGPIASASRDVLSLLNLSPR
RCSPHDTQDSLELRELGLQSLDSGTKNSSNGHHCSNPRKVAPSPTISTSSSPGARSIRLP
AGNGYKFLSPGRFFPSSKC
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcgactctgaaagaaaagttttctgtctttggttctcggacagcgaga
aggcccatccggtgcgttgccgtggacgacgggtcgcggtgtgcactaagcaaggctgag
ttcatggagaaagtgcggcagagtaacgaggcgtgtcagaggggcgacttccaggaggcc
gtgtgtctgtacggcgatgctttgcaggccgacccacagaactgcatcctgtacagtaat
cgttcagcagcgttcctcaagctgggtcagcaccaagcagctctggaggatgctgaaaaa
gcctgtgggctcaatcccaagtggccaaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgcggacgcactggccgccttcgcctctgggctggcccaggacccc
aagagccttcagctgcttgtggggatggtggaagccgccatgaagtcaccactacgagat
tctctggagcccacctatcagcagcttcaaaagatgaagctggacaaaagtccctttgtg
gtggtgtctgtgattggccaggagctactgacagcggggcaccacacggcctccgtggtg
gtgctggaagccgctttgaagataggaacgtgcagcctcaagcttcgcggctccgtcttc
tccgccctcagcagcgcccactggtccctgggcaacacagagaagagcctcggatacatg
cagcaggacttggaggtggccaagaccttaggtgaccaaactggggaatgccgtgctcat
gggaatctgggctctgcattcttctccaaggggaactatcgtgaagcattaaccaaccat
cgcaaccagctggtactggccatgaagttaaaggacagagaggctgcttcaatggcgctg
agcagcttgggccatgtatataccgccataggggactatccgaacgccctcgccagccac
aagcagtgcgtcctgctggccaagcagtccaaggatcagctgtctgaggctcgtgagctg
ggaaacatgggagccgtctacatcgccatgggagactttgataatgctgttcaatgtcac
gagcaacatttgggcatcgctaaagccctggaaaataaaagagaagaggcccgagcttac
agcaacctcggtagtgcctaccactaccatcgtaactttgacaaggccatgtcctaccac
acccatgtcctggagcttgcgcaggagctggaggaaaagtccatcgagatgagggcatat
gcagggctgggtcacgctgcccgctgtatgcaagacttggagagagccaagcagtaccat
gaacagcagctgtcaatcgctgaaggactgaaggacagggctgcagaaggaagggcatcc
tccaacttgggcatcattcaccagatgaagggggactacgagactgcactgaaactacac
aaaacacacctggctattgctcaggagctgaatgactatgctgcccaaggcagggcctat
ggcaacatgggtaatgcctacaatgctcttggagctttcgaccaagcagttcgttatcat
cgccaggagctgcagatctccatggaggttaatgaccgtgcctcacaggcctccacccat
ggcaacctggctgtggcgtaccaagccctcggtgcccatgatcgtgctctacagcattac
cagaaccacctcaacatcgctcgagagctgagggatgtccagagcgaagcacgggctctg
ggaaacttgggaaacttccactgctctcgaggagagtttccacaggctgtgccctactat
gagcagtacctcagattgtccccagaacttcaggacatggagagtgaagggaaagtttgt
cacaatctgggttatgctcactactgcctgggcaactaccaggatgctgttaaatactat
gagcaggatcttgcgctggccaaggaccttcatgacaaacttagtcaggccaaggcgtat
tgcaaccttggtttggcttttaaggccctaggagactttactaaggcggaggagtgccag
aagtatttgctgtcactagcacagtccctgaacaatgcacaggctcgctttagagctcta
gggaacttaggagacatctttgtctgtaaaaaggacgtgacaggagccattcagttttac
gagcagcagctggccttagctcaccaggttaaggagcgcagaatggaagcctgtgcttat
gctgccctgggggccacctacagactagtgcagaaatatgacaaagctctaggctaccac
acccaggaactggaggtataccaagagcttggtgacgtctcaggagagtgcaaagcccat
ggccacttggcagctgtctacatggcccttgggaagtacgccatggccttcaagagctac
gaggagcagttggagcttggacgtaggttaaaggatcctgttgtggaggctcaggtctat
ggaaacatgggcatcacaaaaatgaatgttggggtgatggaggaggctattggctacctg
gagcagcagttggctaccttgcagcagctgagtggaaacgaagcagtaatggaccggggc
agggcctacggaaaccttggagactgttacgaggctttgggagactttgaggaagcgatc
aagtattatgaccagtacttgtcagtggcacagagcctaaatcgcatgcaggaccaggag
aaagcctacagaggcctaggcaatgggcacagggcaatgggcaatctgcagcagtcgttg
gtttgtttcgaaaaacggctggttgtggcacatgaactcggggagtgcggtggcaaggcg
caggcctacggcgagcttggtgcgctccacagccagttaggcaactacgagcaggccatt
tcctgcctggagcgtcagctggccatcgctcgcgacacccaggacagactactggagggc
gatgccagctgtggcttgggtgctgtgtaccaagctatgggagagtatgagacagccttg
cgatgccaccagagtgatctggagattgcagaagaagcaggcagcaccacacgtcaggcc
cgggcctacggcaacttgggtcttacctatgagtcacttggaaactatgagcgagcggtg
gtgttccaagaacagcaccttagtgtggcggctcagactaatgatttggctgccaagacg
ttggcctatggcagcttggggagaacacaccatgcgctgcagaactactcacaagctgtc
atgtacctgcaggaaggcctgcggctcgcggagcagctggctcggcgcgaggacgaggcg
aagattcgccatcgtctcggcctctccctgtgggccagtgggaacttggaggaggcccaa
catcagctctaccgggcgtctgcactgttcgagaccatccgccatgaggcccagcacagc
acggactataaactctcgctgtttgacctgcaaacctcctgttaccaggctctccaaagg
gtcctcgtcagccttggccaccatgacgaggccttggctgtagcggagcgcggtcgtacg
cgagccttcgctgatctcttggtggagcgacagacgggccaacaggactcggacccctac
acgcctgtaacagtggagcacatcttggacacagtcaacagtcagagagccttggtgctg
tatttctcaatggcagcaggctacctctacagctggctactggctccaggggcaggaatc
ctcaagtttcatgaggtttacctcggtgagggcgtgtcagaaggagggtcagacttccag
gatggaggtggtggtgggatggtgagcagctcttcgctggagcagcacattgccagcgct
cgggaggccctgggagtcgagtcgtactacagcagggggtgttctagcagtgagacagag
agcgaggcgggtgattttttggaccaacagtttgaagaactcaacaacaagctcaactcg
gtcaccgacccgacaggcttcctgcgcatggtgtcgagaaacaacctgttcaacaggagc
tgtcagagtatgactagcctcttcagtaacactatgtctcctgccaaagatggtaactcc
tcactgcctcgacgctccagcaaccttggcaaacctccactgcgggcactttacgattta
ctcattgcacctatggagggggggctgatgcattccagcgggcctgttggcagacataga
cagctagtgatggtcctggaaggagagttgtacctcatcccgtttgctctgctaaaagga
agctcctctaatgaatacctgtatgagcgtttcagcctcattgctgtgccctccatccat
ggccttggattcagcgcaaagactcactctcggcgtcctggaccagctccctgtggtggt
gtctccatggcagcagtggtgggaaatcctagactaccctcgcctgtgatggaccgctgg
ctttggggacccatgcccaccgctgaggaagaagctctaatggttgcagagctactgggg
tgtcaacctcttactggctcatctgccaccaaggagagggtgatgggtgccctcacgcag
gctgaatgcgcccattttgccacccacatttcctggaaactggcggctctagtgctcacc
ccaaaccctgaatgtgtacctggtggggcaggtgccactgttggggtgggaacaataggc
agaggcgtgagcagtcggagaggcagcagcggtcgaggcaggaagggctccgttggcagc
ggctacaccatcccagagtctctcaacatgcaggatgacagcagtgatgtggagagtatc
tgtgacagtccgcccctgcaggagttcctcctgacagccgcagatattttggacctgagg
ctgcctgtcaagctggtggtgctggggtcgtaccaagaatctagcagtaaggtgacagca
gacggtgttgtgggactaaccagagccttcctggctgctggtgctcagtgtgttcttgtg
tccttgtggcctgtacccgttgcagcctccaaggtttttgtccatgctttctactctgcc
ctgctgaacgggaccaaggctagtgcagcactagcagatgccatgaaaaccgtgcagagc
agcaaacagtactctcatccgtccaactgggcaggatatatgctgattggcaatgacgtg
aagcttaacagcccatcttcccttattggccaagcgttggctgaaattttgcagtatcca
gatcgagctcgtgatgctctgagagtcttacttcatctggtggagaagtctcttcagagg
atacaaaatggccaacgtaattcaatgtatacatcccagcagagtgtggagaacaaggtc
gggggcgttcccggctggcaggccctgctgacagccgtgggcttccgtctcgactccgca
ggcactggtattcctgctgcagttttctttcccactgctgacccaggagacagactccag
cagtgtagcactacgctacaatcactactgggtttgccgccgccagctctccaggctttg
tgcaaactcatcactgcttcagaggcaggagagcagctcatcaaccgggctgtcaaaaat
atggtggccatgcttcaccaggtgctagtgcaactccagacaggagagaaggagcaggac
ttctccctcctacccattcaggtgtccattagtgtgcaactgtggagactgcctggatgc
catgaatttctggctgctcttggatttgatttatgtgaggtaggacaggaagaggtggtg
ctaaagacgggcaaactggctaatcggcgcaccttgcactttgctcttcagtctctgctg
gcactgtttgactccacagaactgcccaagcgcctgagcctggacagctcatcctccctt
gagtctttggcttcggctcagtctgtctctaacccattgccagtgggatactccagcctt
cctttctctcccccatgcctggacaatcaagcatcagatgccatctctgtctacagcctc
agctctgtaacatcctctatgagttttgcctccaagtcagactgtgacttccttagtcat
cgacaacgagggggcgccactgcacacttcactgttcacaaacacccacatgtgccacgc
agtcgctcgtccccacaaggagctgctgctgcaggtgcaggaacacgaggtgacgaagag
gagtatgagggcttttccattatcagcagcgagccactgggcagccactgtgactctctg
cctctaccaccaggtcacagtcagcgacaccaccgaggaggcaggggggttagtgggtcc
acaggagcagggagaggctacacggtctctgtatcatcacggggcagtgtcagcaccccg
acgtctcctgtcaaaacatcccttgtgcccagtccaaactcaccattccagaaggtgggt
aaggtgagcagctcagacacaggcgaatctgaccagtccagtactgagacagacagcact
gtcaagtcgcaggaagaaaaacccgttcatctggaccctcaagagctggcccagaagatt
ctggaggaaactcacagccacttacgagctgtgagcagtcttcagcgggttggagcggag
ggcgggactggacctgctgcggcctcagcccggagcggtacgttccgctcttccgaaacc
agtgcattcagtcgtcctaacagcagcgccagtggtcgagcacagtcttcccccaagccc
aagcctccctcccgttcttcttccctgcagaaggtaagctctggatacaacagccctgca
gtctcagagtcttcccaaaaagatggtagccatccttcccccaccatggacagccatgca
cagttcaaactgaagtacccaagctctccatacagtggccacatttcccgctctcccagc
aatgtgtctcccagctctggacaccagtcaccagctggtagtgctccgtctcctgctttg
tcctactcttctacaggctctgcctgttctacatcagcagatgctccagatctggaccgg
ctaagaagaggggtcattgatgaaaaagtccaagctatccataacctgaagacgttttgg
actaatgccgcagctcaacagcagcaacatctaggtcctgtcaaagccatccacagcaaa
tccggacctattgcttcagccagtagagatgtactgagccttctaaacctctccccacgc
cgctgctcccctcatgacacccaagacagcctggagctgcgggagctgggactgcagtca
ctggatagcggtaccaagaattcttccaatggacaccactgttccaaccccagaaaagtt
gccccgtcgcctacaatttccacaagcagcagccctggtgctcgttctatccgactacct
gccggcaacggatacaaattcctctcaccgggaagatttttcccttcttctaaatgctga
DBGET
integrated database retrieval system
