Xiphophorus maculatus (southern platyfish): 102220181
Help
Entry
102220181 CDS
T02923
Name
(RefSeq) transcription factor SOX-11-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102220181
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102220181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
NOA36
PPP4R2
Autophagy_act_C
RXT2_N
Motif
Other DBs
NCBI-GeneID:
102220181
NCBI-ProteinID:
XP_005808740
Ensembl:
ENSXMAG00000020179
UniProt:
M4B0I1
LinkDB
All DBs
Position
15:4109097..4111432
Genome browser
AA seq
375 aa
AA seq
DB search
MVQHREHPGAGIAKESREATDTEEGELLAASACSAVPLKPDWCKTASGHIKRPMNAFMVW
SKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDTEKIPFIREAERLRLKHMADYPDYKYR
PKKKPKTEGCAFPAGKSSAQSPEKSTVRSVSKNPGAAKKLSKLKAGKTVAASGRGGSHLP
PQPDHRYRYMVSTSFKTVKREFTDDEEEDDDDDDDDEDSEEEFKVEEEEEEEPSRFSLAK
IPSEPQFESSGRLFYSFKNITRQGGGASAYPASLSPASSSRSGSTSSCCGEDLDDLPAER
ADLALGFLGDPWASSCSAAAGNLSLSLVDKDLDSCGSEGSLGSHFEFPDYCTPELSEMIA
GDWLEANFSDLVFTY
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggtccagcacagggaacatcctggagcgggaatcgccaaggagtcccgcgaggcgacg
gacaccgaggagggtgagctgctggcggcttcggcctgcagcgccgtgccgctgaagccg
gactggtgtaaaacggcgtcgggtcacataaagcggcccatgaatgccttcatggtctgg
tccaagatcgagcggaggaagatcatggagcaaagtccggacatgcacaacgcggagatc
tccaagcggctcgggaagcgctggaagatgttgaaggacacggagaagatcccgttcatc
cgggaggcggagcggctccgactcaagcacatggccgactacccggactataagtaccgg
cccaagaagaagcccaaaaccgagggctgcgcgtttccagcggggaagtcatccgctcaa
tccccggagaagagcaccgtgaggtcggtgagtaaaaaccccggagccgccaagaaactc
tccaaactgaaggccgggaagacggtggccgcgtccggccgcgggggcagccacctgccg
ccgcagccggaccaccggtaccggtacatggtgagcaccagctttaaaaccgtcaaacgg
gagtttactgacgacgaggaggaggatgacgatgatgacgacgatgatgaagactctgag
gaagagttcaaagtggaggaggaagaggaggaggaaccgtcccggttcagcctggccaag
atcccgtccgagccgcagttcgagtcctccggccggctcttctacagcttcaagaacatc
acccggcagggcggcggggcctccgcctacccggcctccctctcccccgcttcctcctcc
cggtccggatccacgtcctcctgctgcggggaggacctggacgacctcccggcggagcgg
gccgacctggcgctgggcttcctgggcgacccctgggcctcctcctgcagcgccgccgcc
gggaacctcagcctgtccctggtggacaaagacctggactcctgcggcagcgagggcagc
ctcgggtcccacttcgagttcccggattactgcaccccggagctgagcgagatgatcgcc
ggggactggctggaggccaacttctcggacctggtcttcacgtactga
DBGET
integrated database retrieval system
