Xiphophorus maculatus (southern platyfish): 102220233
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Entry
102220233 CDS
T02923
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102220233
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
102220233
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Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
102220233
NCBI-ProteinID:
XP_023200646
UniProt:
A0A3B5QFT7
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Position
13:4083669..4109091
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AA seq
721 aa
AA seq
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MCSLEEEEEEEEEEEEAMEEEGEEEMRAESSVCLSGEHLFPMEHSPSMNSTVVDGDELED
HRPLLPPRIVAPPQAYSPQCGIHHTVQTPIDHSAWLDRTQALATTPLYNGHLYVTATPRT
NRRREKTKSKEKKCEKRLQNPGVKERNHQSKTKTLSANTLQETVTSFTDVPMSPRGSPFK
GHSRSNLDLRDVDGRGYRKAGNVSLEMHDRQSLPEIIITSKDDNLQQQQHKHKALQYHQH
PGEAEGPLPGAKRFTRSPSPSPQHSPKRKEDANKDSYSRTHNIGWRLVRRRALFLRRQRL
NDCALAVGLFGVVMMVMETEMSWSIYSKSSIYSLCFKSVISFSTLILFGLIVAYHCCEVQ
LYVHDIGAEDWRIAMTTERFALIVLELFIVAIHPYPVGILAYFQKTKVRTTLSETELEIM
LALPMFLRLYLLGRAMMLHSRLFTDTASRSIGALNKIHFNTRFVGKTLMTTYPGTVLMIF
SVSLWIVAAWGLHVCERHHNYRDLSSNYMEALWMVSVTFLSIGYGDVVPHTYCGRSICLL
TGIMGAGCTVLVVAVVARKLELTRAEKHVHNFMMDSHISKRIKIAAANVLRETWLIYKHT
KLSRERDHTRVRMHQRKLLLAIHQLRRVKMEKRILADQGNTLVDLCKMQSLMYDVLAEVQ
GCRGELNSHIGSLVKNVEELREGFRCLMPLLSSTLSTQNSSIRHLLREREEKSECVSGAE
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcgctggaggaggaggaggaggaggaagaagaggaggaggaggcgatggaggaa
gagggggaggaggagatgagagctgagagctctgtctgcctctcaggggagcatctcttc
cccatggagcattccccgtcaatgaactcaacggtggtggatggagacgagctggaggac
cacaggcccctcctgccaccaaggattgtcgccccacctcaggcctactcgccccaatgt
gggatacaccacacagtccagacacccatcgaccactccgcatggctggacagaacccag
gccctggctaccacgcctttgtacaacggccacctctacgtcactgcgacgcctcgaacc
aacaggaggagagagaaaaccaagagcaaagagaaaaaatgcgagaaacggctgcaaaat
ccaggtgtgaaggagcgcaaccaccagagcaaaactaaaactctgagcgcaaacacactc
caggagacggttacgtccttcaccgatgtgcccatgtcccccagaggatcacccttcaag
ggccacagcaggtccaacctggatctcagggatgttgacggtcgagggtaccgcaaggca
ggcaacgtttctctggagatgcacgaccgccagagcctcccagagatcatcatcaccagc
aaggacgacaacctccagcagcagcagcacaaacacaaggcgctgcagtatcaccagcat
ccgggggaggccgaggggccgctgccaggggccaagcgcttcaccaggagccccagcccc
agtcctcagcacagccccaaacgcaaggaagacgccaacaaggactcgtactcgcggacg
cacaacatcggctggcggctggtccgcaggagggccctgttcctgaggaggcagcggctg
aatgactgcgccctggcagtggggctgttcggggtagtcatgatggtgatggagacggag
atgtcctggagcatctacagcaagagctccatctactcgctgtgtttcaagtcagtcatc
agcttttctacgctcatcttgttcggcctcattgtggcgtaccactgctgtgaggtgcag
ctctacgttcatgacattggtgcagaggactggagaatagccatgaccaccgaacgcttc
gccctgatcgtcttggagctcttcatagtggccatccatccttatccggtgggaatactg
gcatacttccagaagaccaaagtccgcacaaccctctctgagactgagctggagatcatg
ctggctttgcccatgtttctgagactgtacctgctgggtcgggccatgatgctgcacagc
cgcctcttcacagacacggcctcccgaagcatcggagccctgaacaagatccactttaac
acccgcttcgttggaaaaacgttgatgactacctatcctggtactgtcctgatgattttc
agtgtttctctgtggattgtggcggcgtggggcctacatgtgtgcgagaggcaccacaat
tacagagaccttagcagcaactacatggaagccctgtggatggtctccgtcaccttcctg
tccatcggttacggagacgtggtccctcacacttactgtggccgcagcatctgcctcctc
actgggatcatgggggcgggatgcacggtcctggtggtggcggtggtggccaggaagctg
gagttgacccgagctgagaagcacgtccacaacttcatgatggactctcacatctccaag
aggataaaaattgcagcagcaaatgtgctgagagagacttggctcatctacaagcacact
aagctgtcaagagaaagagaccacaccagagtccgcatgcaccagaggaagctgctgctg
gccatccaccagttgcggagagtgaagatggagaagaggattcttgcagatcaggggaac
acgctcgttgacctctgcaagatgcagagcctgatgtacgacgtgctggcggaggtgcag
ggctgcaggggggagctgaactcgcacatcggcagcctggtgaagaacgtggaggagctg
agggagggcttccggtgcctgatgccgctgctgtccagcacgctgtccacacagaactcc
tccatccgccacctgctgagagagagggaggagaagagcgagtgtgtgagcggagcagag
gggtag
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