Xiphophorus maculatus (southern platyfish): 102220268
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Entry
102220268 CDS
T02923
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102220268
Cell adhesion molecules [BR:
xma04515
]
Immunoglobulin superfamily
DSCAM family
102220268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Pur_ac_phosph_N
Ig_6
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
102220268
NCBI-ProteinID:
XP_023207192
Ensembl:
ENSXMAG00000004039
LinkDB
All DBs
Position
18:22341490..22451606
Genome browser
AA seq
2093 aa
AA seq
DB search
MWLVTLLLLFSLQEANSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LAAGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHVK
AVFREPYTVRVADQHSMRGNIAVFKCLIPSAVQEYVSVVSWEKDTVSIIPGNRFFLTSFG
ALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVKDPKESPPSVLDSFQSGEMQVG
HSVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRITGLTISDLRLEDSGNYICEVTNSF
GSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWYRNTEPVMPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFASRKGQTAQDFSIILLEDGTPRIVASFSERVVL
PGEPFSLMCAAKGAPPPTITWTLDDEPVARDLSRVRSSQYTLSDGSTVSFVNVSSPQIRD
GGVYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNTFINCRVIGYPYYSINWY
KEGILLPDNHRQVVFENGTLKLSDVQKGMDEGAYVCSVLIQPQLFITQTIYVTVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVPSSGITIDTKEFMSSLQISKV
SLKHNGNYTCIASNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKSAILNCSVDGYPPP
KVMWKHARGALAGIGNPQQYHPVPLTGRIQIMTNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMVLTVKIPAMITSHPNTTMAKKGHVKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EVREVKDRSMNLRWTQRFDGNSVITSYDIEYKNKTDTWELKHATRNISPTNNQANIVDLH
PASVYSIRMFSYNAIGKSEASKELTISTEEAQPDGPPMDVVLQPVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVINWAEPPRMTLHGVLKGYRVVFWAV
FPDGEWGEMQNITTTKEQVELKGLEKFTNYSIQVLAFTQAGDGVRSNVLYIQTREDYPGP
PAGIKAVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSSGSGQPLPSEYEANPELLLYRIT
HLNHRQQYLIWAAAVTTAGRGNISDKVTVEPAAKAPAKILSFGGTVTTPWMKEVRLPCSS
VGEPTPTIKWTKDSEDTAIPVSLDGQRLILANGTLVLRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSSERSFKLENLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPIFTYVNS
THARLNLQGWASGGCPITSMTLEFRPKGMWTWQHVRTNATTDVFLAELREGTWYELKMKA
CNSAGCGNQSSQFSTPNYDGSTIPPIKSPLEKNDDVKKLFSIGCPVILVTLGVALLFVAI
RKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGI
KQIGDDKATIPVTDTEFNQTGNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRK
SVKSAHSIRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTD
KGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNA
DSMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRK
QSEHHDPCPVVPPREASIRGLAQRAYHSQGRHVTMDSAKQQALTMGHSGLSNLTSSGASS
GGATGGGGGGLSASSSSSTLPQRTLTMPGSAASAAQSAAAAAAATAAAGSASSSSGGGAA
GTSGATPGGASSSSSKMGGSRDSLLESSSSGLGRLQKQRDGGSGAYSKSYTLV
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttactcctgctgttttctttgcaagaagccaacagtgaggatgtt
gtctctactcggctgtactttgtgaacgcctccctgcagcgagtgaccttctccagctcg
gtgggggtgtccctgccctgccctgcgggcggcgccccccatgccgtcctgcgctggtac
ctggctgccggagacgacatttacgacgtgccccacatacgccacgtgcatgccaacggc
accctccagctctaccctttctccccctctgcttacaacagcatcatccacgacaacgag
tacttctgcaccgcggagaatcaagcgggcaagatccgaagccccagcatccacgttaaa
gcagtgttcagggagccctacacagtccgagtggcagaccagcattccatgcggggtaac
attgccgtattcaagtgcctcatcccttcagctgttcaagagtacgtcagcgtggtgtcc
tgggagaaagacaccgtttccatcatccctggtaatcgtttcttcctgacctcatttggc
gctttatatatctcagaagtgcagaaggaagatgctttgtccacctaccgttgcatcaca
aagcacaagtacagtggagagacccgccagagtaatggagccaggctctctgtaaaggac
cctaaggagtcccccccatctgtgctggatagtttccagtctggtgagatgcaggttgga
cacagcgtggagctgccctgcattgcctccggatatccaaatcccaccatccgatggttg
aaggatggtcgaccactgccagctgactctcgctggacacgccgcatcactggcctcact
atctctgacttaagacttgaggacagtggcaactacatttgtgaagtcacgaacagcttt
ggctccaaagaggtgacgggtcatctcaatgttatagaaccactgcgggtcactttgtct
ccaaagaacctcaagacggggatcagcagtacagtaatcctctcctgtgctgtccagggt
tccccccactttactgtttcctggtaccgtaacacagaacctgtgatgcctgatcagcac
ttttccatccaaggagcacacaatgagacactcttcatttctgctgcacaaaaaagacat
tctggagcttaccagtgctttgcctcacgaaagggccagactgcccaggacttctccatc
atactgctggaagatggtacgccccgtattgtcgcctccttcagcgaacgagtggtgctc
cctggtgagccattctccctgatgtgtgctgccaaaggagcccctccgcctaccatcacc
tggaccctggatgacgagcccgtggctcgggatctgtcacgtgtgagatccagccagtac
acgctctccgatgggagcaccgttagcttcgtcaacgtcagcagcccgcagattcgtgat
ggaggagtgtatcggtgcgccgcacgaaactcggctggtagtgctgagtaccaagcgcgc
ataaacgtaagagggcctccgaggattaggcctatgaagaatattacagcggtggcagga
agaaacactttcataaactgcagagtaattgggtatccttattactcaattaactggtac
aaggagggaattctgctgcctgacaaccatcgtcaggtggtgtttgagaatgggacactt
aagctcagcgatgttcagaaaggcatggatgagggcgcctatgtgtgcagcgtgctgatc
cagccacagctattcatcacacaaaccatttatgtcaccgtcaaagtccccccgctgatc
cagccgtttgactttcccccaacctccatcggtaaattgatgtacatcgcctgtgtggtg
tcatctggagacatgcccatacgaatcacctggcgtaaggacggccaggagatcgtgccc
tcctcggggatcaccattgacacaaaggagtttatgagttcactgcagatttccaaagtg
tcgctcaaacacaacggcaactacacctgcatcgctagcaacgatgctgctactgtcagc
acagagaggcagctcacagttacagttcctccacgatttgttgtgcagcccaacaaccag
gatggcatctatggcaaatcagcaatcttgaactgttctgttgatggataccctcctcct
aaggtcatgtggaagcacgccagaggagctttagctgggattggaaacccacagcagtac
cacccggttcctctaactggccgcattcagatcatgactaatggctccctgctgatcaga
catgtactggaggaagatcgaggtttctacctctgtcaggcctccaatggcgtgggttcg
gacatcagcaagagtatggtcctcactgttaagatcccagcaatgatcaccagtcacccc
aacactaccatggccaaaaagggtcatgtgaaggagctgaactgcacagccagaggagaa
tggcccatcatcatccgttgggaaagaggtgacacagtgattgacccagatcgcaacccc
cggtactccataaccacaagccccaatgaaaagacagatgaggtgttgtctactctcaag
ctaaagccagcagagcgtgaagattcagtcttcttctcctgtcatgccatcaactcttat
ggagaaggacgaggccttatccaactcactgtgcaagagcctccagaccctccagagcta
gaagtgcgagaagtaaaagatcgtagcatgaatcttcgatggacacaaagatttgatgga
aatagcgtcattacctcctatgacattgaatacaaaaacaagacagatacttgggagctg
aagcatgccactcgaaatatatctcccacaaacaatcaggccaacatagtagacctccac
cctgcatccgtctacagtatccgtatgttctcatacaatgcaataggcaagagtgaggcc
agtaaagagctcaccatcagcaccgaagaagcacagcctgatggtcctccaatggatgtc
gtccttcagccagtcacctctcaaagcatccgggtgacctggaaggctccaagaaaagag
ctacagaatggggttatccgcggttatcagatcggctacagagagaatggccctggcagc
aacggccagtacagcattgttgagatgaaagccactggggacagtgaggtctacaccctg
gacaacctgaagaagtttgctcagtacggcgtggttgtccaggccttcaacagagcaggc
acaggaccttcaagctcagagatcaatgcgacaacactggaggatgtgcctagtcagcct
cctcagaacgtacgagccatctccgtaacgtcagatgaggcggtgatcaactgggctgaa
cctcctagaatgactctccatggtgtactgaagggatatcgtgttgtgttctgggctgtg
ttcccagacggagagtggggtgaaatgcaaaacattacaaccaccaaggagcaggtggag
ctcaaaggccttgagaagttcaccaactacagcatccaggttctggccttcacccaggcc
ggagacggtgttcggagcaacgtcctgtatatccaaacccgtgaagactatcccggacct
ccagctggcattaaagcagtgccctcctctgccagcagtgtcgtagtatcgtggttaccc
cctcacaaaccaaatggaatcatccgcaagtacaccatctactgctccagctctggttcc
ggccaaccgctgccaagtgagtatgaagctaacccagaacttcttctttaccgaatcacc
cacctgaaccaccggcagcagtacctgatctgggctgctgctgtcaccactgccggccgc
ggtaacatcagcgacaaagttacagtggagcctgctgcaaaggcccctgccaaaatcttg
tcatttggaggtacggtaaccactccttggatgaaggaggtgcgtctgccttgtagttcc
gtaggtgaaccaacacctacaatcaaatggaccaaagacagtgaggacacagcaatccca
gtgtctctcgatggacagcgcctcattctggccaatgggacgctggtcctgcgatccgtc
aaagctgaagactctggttattacacctgcacagccaccaacacattgggcttcgacacc
atcatagtcaaccttttggtgcaagtccctccagatcagcctcgtcttaccgtttccacc
acctccacctcctccattactctcgcctggattccaggggacaatggaggaagctccatc
agaggctttgtgctacagtattctgttgataacacagaagaatggaaagatgttttcatc
agttcatcagagcgttcatttaaactggaaaacctgcgctgtgggacctggtacaaagtc
aagctggctgccaagaacagcgttggagctggacgcatcagcgagatcattgaggcaaag
acccacgggcgagaacctcagttcaacaaggaccagcctatcttcacctacgtcaactcc
acccatgctcgcctcaacctgcagggctgggccagcggaggctgtccaatcacctcaatg
acactggaattcagaccaaaaggtatgtggacatggcagcatgtccgcaccaacgccacc
acagacgtgtttctggcagaactacgtgaaggcacctggtatgagttgaagatgaaagca
tgtaacagtgctggctgtggcaaccagagttctcagttttcaacacccaactatgatggc
agcaccattcctcccattaagtcccccttggaaaaaaatgacgatgtgaagaagctgttt
tcaatcggctgtcctgtgattctggtgactcttggggttgcgctgctgtttgtcgccatt
cgcaagaaacgcaaagagaagaggctgaagagactccgagatgccaaaagtctggcagag
atgctcatcagtaaaaacaaccgcagctttgacacgccagtgaaaggacctcctcagggc
ccacggctacacattgacatccccagagtgcagctgctaattgaggacaaagaaggcatc
aagcaaatcggagatgacaaggccactattcctgtgacagacacagagttcaaccaaact
gggaatcctcagagcttctgcactggtgtttctgtccatcaccctgccctcatccaaaac
acaggtcctttgatagacatgtctgacatcagaccaggaaccaacccagtgtcaaggaag
agtgttaagtcagcccacagcatcaggaaccgctactccagtcagtggactctgaccaag
tgtcaggcttcaacgccagcccgcactctcacttcagactggcgcacagttggttctcag
catggtatcactgtcacagagagtgacagctacagtgccagcctctcacaggacacagac
aaggggcgcaacagcatggtgtccaccgagagtgcctcctccacctacgaagaactggca
agagcctacgagcatgcaaagctggaggaacacctgcagcatgccaaatttgagattaca
gagtgctttatatccgacagctcatctgatcagatgactacaggtaccaatgacaacgca
gacagtatgacgtctatgagcacaccatcagagcccggtatctgccgtttcactgcctca
ccgcccaaaccccaagactacgatcgtggcaagaatgtagccgtgcccattccacaccgc
gccaagagcgactactgcaacctgcccctgtacatgaagtccgatccctttttccgaaag
cagtcagaacaccatgacccatgtccagtagttccaccacgtgaagcctctattcgtggc
ctagcccagcgagcgtaccacagccagggccgtcacgtgactatggactctgcaaagcaa
caggctctgaccatgggccactctggcctgtcaaacctcacttcctctggggcgtcttct
ggaggagcaacaggaggcggcggtggaggcttgtctgctagctccagcagctccacgctt
ccccagcggactctcaccatgcctggctccgctgcttctgcggctcagagtgctgctgcc
gccgctgcagccaccgctgctgcagggagcgcatcatcttcctctggcggtggggcagca
gggacctcaggggcgacccctggaggtgcctcttcttcctcctccaaaatgggaggatcc
agagactctctcctggagagcagctcttcgggattaggcagactgcagaagcagagggat
ggggggtcaggagcctactccaagtcctacacactggtgtag
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integrated database retrieval system
